Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is hflK [H]
Identifier: 187918076
GI number: 187918076
Start: 202994
End: 203926
Strand: Direct
Name: hflK [H]
Synonym: BH0203
Alternate gene names: 187918076
Gene position: 202994-203926 (Clockwise)
Preceding gene: 187918075
Following gene: 187918077
Centisome position: 22.01
GC content: 28.62
Gene sequence:
>933_bases ATGTTAAATAACATCTTAAAATTTTTCAATAAAACATATGAATACATGATAATTTTAATTATACTAGTAATTATATTAAT AATAACAATTGCAAATATTTTTGTGGTTGGTCCATCTGAGGAAGCCATTGTCCTGCGTCTTGGCAAGTTAAATAGAATAC TTGAACCGGGAATACATATAAAAATTCCATTAATTGAAGAAAAAGCAATTGTACCGGTAAAGATCGTACAAGAAGTTAAA TTTGGTTTTAATGCAAACAATAATATAGAAGCTAATTTGGATGAAAATGAAGGAATAATTATTACTGGTGACTTGAATAT AATTAAAGTTGAATGGCTAGTACAATATAAAATCAGCGATCCATATGCTTTCATGTTTAAAGTAGAAGATCCAGAAAAAA CCATAATAGATATTGCAAAATCATCAATGAACAGATTAATTGGGGACAATACTATTTTTGAGATAATTAATGATAATAGG GTTGGTGTTACAGAAGGAGTAAAAGCCTCTATGAATGAAATTATAAAAACATATGATTTAGGAATTGATATTGTGCAAGT ACAAATCAGAAATGCTATGCCGCCAAAGGGAAAAGTTTATGAGGCATTTGAAGATGTTAATATTGCAATCCAAGATAAAA ATAAATTTGTTAATGAGGGAAGGAAAGAATTTAATCAAATTATCCCAAAAATTAGAGGAGAAGCACTTAAAGTGCTAGAA GAAGCTAAGGGATATAAAGAAAGCAGAATAAATAATGCACTAGCTGATACTGCTATCTTTAATGCAATTCTAAATGCATA CATCCAAGATCCAGAAATTACAATAGAGAGAATCTATAACGAAACAATGAGGGAAATTCTTGAAAGCAGAGACAACATTG AAATAATTGACAAAAACTTAAATAATTTCCTTCCATTTAAGGAGGTTAAGTAA
Upstream 100 bases:
>100_bases AACTTAAACACAAAATACGCCCTAAGAAAAATTAAAACATAAAGGACTTAAAAATAAAAATATATGATTTTTTGGAAATA AATAATAAAAAGGAGGAAAA
Downstream 100 bases:
>100_bases GATGAAATACATACTAAGATTTTTATTCTCTATAGCTAAGATTTTAGCTTTTACATTAACATTTGGATTAGTATCGTTAG CCATAATGCAACCACTCTAT
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MLNNILKFFNKTYEYMIILIILVIILIITIANIFVVGPSEEAIVLRLGKLNRILEPGIHIKIPLIEEKAIVPVKIVQEVK FGFNANNNIEANLDENEGIIITGDLNIIKVEWLVQYKISDPYAFMFKVEDPEKTIIDIAKSSMNRLIGDNTIFEIINDNR VGVTEGVKASMNEIIKTYDLGIDIVQVQIRNAMPPKGKVYEAFEDVNIAIQDKNKFVNEGRKEFNQIIPKIRGEALKVLE EAKGYKESRINNALADTAIFNAILNAYIQDPEITIERIYNETMREILESRDNIEIIDKNLNNFLPFKEVK
Sequences:
>Translated_310_residues MLNNILKFFNKTYEYMIILIILVIILIITIANIFVVGPSEEAIVLRLGKLNRILEPGIHIKIPLIEEKAIVPVKIVQEVK FGFNANNNIEANLDENEGIIITGDLNIIKVEWLVQYKISDPYAFMFKVEDPEKTIIDIAKSSMNRLIGDNTIFEIINDNR VGVTEGVKASMNEIIKTYDLGIDIVQVQIRNAMPPKGKVYEAFEDVNIAIQDKNKFVNEGRKEFNQIIPKIRGEALKVLE EAKGYKESRINNALADTAIFNAILNAYIQDPEITIERIYNETMREILESRDNIEIIDKNLNNFLPFKEVK >Mature_310_residues MLNNILKFFNKTYEYMIILIILVIILIITIANIFVVGPSEEAIVLRLGKLNRILEPGIHIKIPLIEEKAIVPVKIVQEVK FGFNANNNIEANLDENEGIIITGDLNIIKVEWLVQYKISDPYAFMFKVEDPEKTIIDIAKSSMNRLIGDNTIFEIINDNR VGVTEGVKASMNEIIKTYDLGIDIVQVQIRNAMPPKGKVYEAFEDVNIAIQDKNKFVNEGRKEFNQIIPKIRGEALKVLE EAKGYKESRINNALADTAIFNAILNAYIQDPEITIERIYNETMREILESRDNIEIIDKNLNNFLPFKEVK
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=271, Percent_Identity=29.1512915129151, Blast_Score=143, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 35452; Mature: 35452
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNNILKFFNKTYEYMIILIILVIILIITIANIFVVGPSEEAIVLRLGKLNRILEPGIHI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEHHHHHHHCCCCEE KIPLIEEKAIVPVKIVQEVKFGFNANNNIEANLDENEGIIITGDLNIIKVEWLVQYKISD EEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCEEEEEEEEEEEEECC PYAFMFKVEDPEKTIIDIAKSSMNRLIGDNTIFEIINDNRVGVTEGVKASMNEIIKTYDL CEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHC GIDIVQVQIRNAMPPKGKVYEAFEDVNIAIQDKNKFVNEGRKEFNQIIPKIRGEALKVLE CCEEEEEEECCCCCCCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH EAKGYKESRINNALADTAIFNAILNAYIQDPEITIERIYNETMREILESRDNIEIIDKNL HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCH NNFLPFKEVK HHCCCCCCCC >Mature Secondary Structure MLNNILKFFNKTYEYMIILIILVIILIITIANIFVVGPSEEAIVLRLGKLNRILEPGIHI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEHHHHHHHCCCCEE KIPLIEEKAIVPVKIVQEVKFGFNANNNIEANLDENEGIIITGDLNIIKVEWLVQYKISD EEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCEEEEEEEEEEEEECC PYAFMFKVEDPEKTIIDIAKSSMNRLIGDNTIFEIINDNRVGVTEGVKASMNEIIKTYDL CEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHC GIDIVQVQIRNAMPPKGKVYEAFEDVNIAIQDKNKFVNEGRKEFNQIIPKIRGEALKVLE CCEEEEEEECCCCCCCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH EAKGYKESRINNALADTAIFNAILNAYIQDPEITIERIYNETMREILESRDNIEIIDKNL HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCH NNFLPFKEVK HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]