Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736567
Identifier: 187736567
GI number: 187736567
Start: 2540032
End: 2541171
Strand: Direct
Name: 187736567
Synonym: Amuc_2089
Alternate gene names: NA
Gene position: 2540032-2541171 (Clockwise)
Preceding gene: 187736566
Following gene: 187736568
Centisome position: 95.34
GC content: 62.63
Gene sequence:
>1140_bases ATGGCTCCCATATTACAAACCATCGCGTCCCTTGACTCCCGTTCGGGCGGCACCAGCACCTGCACTTATGACCTGGTCAA AGCCCTGAACGCTTCCGGCATGCCCACGGACATCCTCACCCTCCAGCCCGGCTCCCCACAAGAACGGATGGTGGGAGAAG ACAGCTTTATCCATGCCTGCCCGTTTGACGCCCGCACCCCTCTCGCCGTCTCCCGGAACATACGCCGCTTTCTGGCCGGC TCCCGGTACCGCCTCTACCACACCAACGGCCTGTGGCTGGACGTCAACCACGCCACATGCGCGCACGCGCGCAAAACGGA TGCCCCCTGCGTCGTTTCCCTGCACGGCATGCTGTACCCCCAGGCGCTGGAGCGCGGCGGCTGGAAAAAGAAACTCATGC TCGCCCTGGGACACCGGAAAGACATCTCCGGAGCCGCCTGCGTCCACGTCACCTGCGAAAAGGAAATGGAATACTACAGG GACATGGGCTTTTCCAACCCCGTGGCCGTCATCCCCAATCCGGTGCGGATCCCGGAATATCTTGCGGATATCAGGCGCCC CGGGCACGAGGGCTTCCGGGCCGGATTCCTGGGCAGACTCCATCCCATCAAAAATCTGGAGGCCCTGATCACGGCCTGGG GTCAGCTGCGCCTCCCGAACGCGGAGCTTCTGCTCATCGGTGACGGAGACCCGGAATACAAGGCCCGGCTGGAAGAACTG GTCCGGGAGGAAAACATTTCCAATATCTCCTTCACGGGCTTTGTTTCCGGAAGGCGGAAATATGAAATGCTCTCTTCCCT GGACGTCCTGTGCGCCCCCAGCCACCAGGAAAACTTTGGAATGAGCATTGCGGAGGCCCTGCTGGCGGGAACGCCCGTCA TCGCCAGCCGGGGAACGCCGTGGGAAGCGCTGAACACCCGCCGGTGCGGCTGGTGGTGCGGCAACGATTCCTCTTCCCTG GCCGCAGCCCTGGAAAACGCCTTCAACCTCTCCCCGCAGGAAAGGCTCGCCATGGGAGACCGCGGACGCTCCCTCGTCAT GGAAACCTGCGCCGCCCCCCACGCGGCCGACCGCATGAAACGCCTGTACCGGTATCTGCTGGGGCAGGAAGCCAAACCGG AATTTGTCTATCTCCCATGA
Upstream 100 bases:
>100_bases TTGAAAAGAATTATGAAACCATGGCGCGCCGCGTCGCGGACATCAACTGGAACAGCCGCGTGGAAACGCAGCTCAAGGCA TACACCTCCCTTTTAGATTA
Downstream 100 bases:
>100_bases ACATCCTCTTTTTGCTCGGAAAATTCCCTTCCATAGGCGGCGTGGAAACCGTCACCGCCATTTTGGCGAATGAATTCTCC GCCCGGGGCCATGCGGTTCA
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 1 Family; Glycosyltransferase Family 4 Protein; Glycosyl Transferase GT4 Family; Poly(Glycerol-Phosphate) Alpha-Glucosyltransferase; LPS Biosynthesis Protein; Transferase; Phosphatidylinositol Alpha-Mannosyltransferase; A-Glycosyltransferase; LPS Glycosyltransferase IcsA; Glycosyl Transferase Group 1 Protein; Polysaccharide Biosynthesis Protein; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MAPILQTIASLDSRSGGTSTCTYDLVKALNASGMPTDILTLQPGSPQERMVGEDSFIHACPFDARTPLAVSRNIRRFLAG SRYRLYHTNGLWLDVNHATCAHARKTDAPCVVSLHGMLYPQALERGGWKKKLMLALGHRKDISGAACVHVTCEKEMEYYR DMGFSNPVAVIPNPVRIPEYLADIRRPGHEGFRAGFLGRLHPIKNLEALITAWGQLRLPNAELLLIGDGDPEYKARLEEL VREENISNISFTGFVSGRRKYEMLSSLDVLCAPSHQENFGMSIAEALLAGTPVIASRGTPWEALNTRRCGWWCGNDSSSL AAALENAFNLSPQERLAMGDRGRSLVMETCAAPHAADRMKRLYRYLLGQEAKPEFVYLP
Sequences:
>Translated_379_residues MAPILQTIASLDSRSGGTSTCTYDLVKALNASGMPTDILTLQPGSPQERMVGEDSFIHACPFDARTPLAVSRNIRRFLAG SRYRLYHTNGLWLDVNHATCAHARKTDAPCVVSLHGMLYPQALERGGWKKKLMLALGHRKDISGAACVHVTCEKEMEYYR DMGFSNPVAVIPNPVRIPEYLADIRRPGHEGFRAGFLGRLHPIKNLEALITAWGQLRLPNAELLLIGDGDPEYKARLEEL VREENISNISFTGFVSGRRKYEMLSSLDVLCAPSHQENFGMSIAEALLAGTPVIASRGTPWEALNTRRCGWWCGNDSSSL AAALENAFNLSPQERLAMGDRGRSLVMETCAAPHAADRMKRLYRYLLGQEAKPEFVYLP >Mature_378_residues APILQTIASLDSRSGGTSTCTYDLVKALNASGMPTDILTLQPGSPQERMVGEDSFIHACPFDARTPLAVSRNIRRFLAGS RYRLYHTNGLWLDVNHATCAHARKTDAPCVVSLHGMLYPQALERGGWKKKLMLALGHRKDISGAACVHVTCEKEMEYYRD MGFSNPVAVIPNPVRIPEYLADIRRPGHEGFRAGFLGRLHPIKNLEALITAWGQLRLPNAELLLIGDGDPEYKARLEELV REENISNISFTGFVSGRRKYEMLSSLDVLCAPSHQENFGMSIAEALLAGTPVIASRGTPWEALNTRRCGWWCGNDSSSLA AALENAFNLSPQERLAMGDRGRSLVMETCAAPHAADRMKRLYRYLLGQEAKPEFVYLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41972; Mature: 41840
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPILQTIASLDSRSGGTSTCTYDLVKALNASGMPTDILTLQPGSPQERMVGEDSFIHAC CCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCCCEEEEC PFDARTPLAVSRNIRRFLAGSRYRLYHTNGLWLDVNHATCAHARKTDAPCVVSLHGMLYP CCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCCHHHHHCCCCCCCEEEEEHHHHHH QALERGGWKKKLMLALGHRKDISGAACVHVTCEKEMEYYRDMGFSNPVAVIPNPVRIPEY HHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCEEECCCCCCHHHH LADIRRPGHEGFRAGFLGRLHPIKNLEALITAWGQLRLPNAELLLIGDGDPEYKARLEEL HHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCEEEEECCCHHHHHHHHHH VREENISNISFTGFVSGRRKYEMLSSLDVLCAPSHQENFGMSIAEALLAGTPVIASRGTP HHHCCCCCEEEEEEECCCHHHHHHHCCCEEECCCCCCCCCHHHHHHHHCCCCEEECCCCC WEALNTRRCGWWCGNDSSSLAAALENAFNLSPQERLAMGDRGRSLVMETCAAPHAADRMK HHHCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHH RLYRYLLGQEAKPEFVYLP HHHHHHHCCCCCCCEEECC >Mature Secondary Structure APILQTIASLDSRSGGTSTCTYDLVKALNASGMPTDILTLQPGSPQERMVGEDSFIHAC CHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCCCEEEEC PFDARTPLAVSRNIRRFLAGSRYRLYHTNGLWLDVNHATCAHARKTDAPCVVSLHGMLYP CCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCCHHHHHCCCCCCCEEEEEHHHHHH QALERGGWKKKLMLALGHRKDISGAACVHVTCEKEMEYYRDMGFSNPVAVIPNPVRIPEY HHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCEEECCCCCCHHHH LADIRRPGHEGFRAGFLGRLHPIKNLEALITAWGQLRLPNAELLLIGDGDPEYKARLEEL HHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCEEEEECCCHHHHHHHHHH VREENISNISFTGFVSGRRKYEMLSSLDVLCAPSHQENFGMSIAEALLAGTPVIASRGTP HHHCCCCCEEEEEEECCCHHHHHHHCCCEEECCCCCCCCCHHHHHHHHCCCCEEECCCCC WEALNTRRCGWWCGNDSSSLAAALENAFNLSPQERLAMGDRGRSLVMETCAAPHAADRMK HHHCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHH RLYRYLLGQEAKPEFVYLP HHHHHHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA