Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736565

Identifier: 187736565

GI number: 187736565

Start: 2538156

End: 2538986

Strand: Direct

Name: 187736565

Synonym: Amuc_2087

Alternate gene names: NA

Gene position: 2538156-2538986 (Clockwise)

Preceding gene: 187736564

Following gene: 187736566

Centisome position: 95.27

GC content: 52.35

Gene sequence:

>831_bases
ATGGAATCTGAAAAAACATATTTCTACCCTGTCCTCTCGGATTATGACTTCGGCTGGTTCCGTTTATCAGGACCGGGGCT
TGCCAACTGCATGTTTGTGGCGGCTCGCGCCTACATACTCAGCAGACGGGAAAACGCAGGCTACATTTCCCCCACCTGGA
CCAAACTCAGCCCGGGGACATTCCTTCGCCGGGAGAAAGATAAAAGAGTTTATTTCAAAATTTTCAATGAGCTGGGAATC
AAAGGATTAAAAAAAGTCCAACTGCTGCTTGCGGAAAAATTGCGCCCCGGTTCCGGGAAGGTGAAGCAAATCCGCGGCAT
GGGGGAATACTTTGACGACCTCAATGAACACATGGATCTGGTGCATGAATTCATAGAAAAAATCACCAGGAAGGAAATCA
TTGAAAACGTGCGTCCGGAAGCCCTGAAGGACTGCATCGCCATTCACGTGCGGCTGGGAGACTATTCTCCGGAGATGCGG
GTGGATATCCTCTGGTACGTGAATCTCGTCAGGGAAATCCTGTCCATCAAGCCGTCCCAGCAATTCCTCATCTTTTCCGA
CGGCTCGGACGAAGAGCTTCGGGAACTGCTGGCCCTCCCCAACGTCAGGCGCGCGTTTTACGGCAACGCCTACGCGGATA
TGTACGCCATCAGCAGGTGCAAATGGGTCATTGCTTCGGATTCCACATTCTCCGCCTGGGGAGCGTTCATAGGGGAACGC
CCCATCCTGTTCAACAAAAGGCATTTCAAGCGGGTATACCGGAACAGCGTTCCGGAAGCCGTTCTGGGGGACAGCACCCG
CATTCCGGATGAATTCAAGGCGCTGCTTTAA

Upstream 100 bases:

>100_bases
GCCAACTTCGAATCATATCTATGGGGAATCAACCAGGTGGTCACCACCCTGTTGTTCACCTCCTTCGCCGTATTGCAAAA
ACGCATGACAGACCTTAAAC

Downstream 100 bases:

>100_bases
CTATGAACAAGCAATATGACTTCATCTACCTGACCAATACGCCTTCCTTTTACAAAGTAAGGCTTTGTGAGGAACTGGCG
AAAAAACACTCCGTTCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MESEKTYFYPVLSDYDFGWFRLSGPGLANCMFVAARAYILSRRENAGYISPTWTKLSPGTFLRREKDKRVYFKIFNELGI
KGLKKVQLLLAEKLRPGSGKVKQIRGMGEYFDDLNEHMDLVHEFIEKITRKEIIENVRPEALKDCIAIHVRLGDYSPEMR
VDILWYVNLVREILSIKPSQQFLIFSDGSDEELRELLALPNVRRAFYGNAYADMYAISRCKWVIASDSTFSAWGAFIGER
PILFNKRHFKRVYRNSVPEAVLGDSTRIPDEFKALL

Sequences:

>Translated_276_residues
MESEKTYFYPVLSDYDFGWFRLSGPGLANCMFVAARAYILSRRENAGYISPTWTKLSPGTFLRREKDKRVYFKIFNELGI
KGLKKVQLLLAEKLRPGSGKVKQIRGMGEYFDDLNEHMDLVHEFIEKITRKEIIENVRPEALKDCIAIHVRLGDYSPEMR
VDILWYVNLVREILSIKPSQQFLIFSDGSDEELRELLALPNVRRAFYGNAYADMYAISRCKWVIASDSTFSAWGAFIGER
PILFNKRHFKRVYRNSVPEAVLGDSTRIPDEFKALL
>Mature_276_residues
MESEKTYFYPVLSDYDFGWFRLSGPGLANCMFVAARAYILSRRENAGYISPTWTKLSPGTFLRREKDKRVYFKIFNELGI
KGLKKVQLLLAEKLRPGSGKVKQIRGMGEYFDDLNEHMDLVHEFIEKITRKEIIENVRPEALKDCIAIHVRLGDYSPEMR
VDILWYVNLVREILSIKPSQQFLIFSDGSDEELRELLALPNVRRAFYGNAYADMYAISRCKWVIASDSTFSAWGAFIGER
PILFNKRHFKRVYRNSVPEAVLGDSTRIPDEFKALL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32044; Mature: 32044

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESEKTYFYPVLSDYDFGWFRLSGPGLANCMFVAARAYILSRRENAGYISPTWTKLSPGT
CCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
FLRREKDKRVYFKIFNELGIKGLKKVQLLLAEKLRPGSGKVKQIRGMGEYFDDLNEHMDL
HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VHEFIEKITRKEIIENVRPEALKDCIAIHVRLGDYSPEMRVDILWYVNLVREILSIKPSQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC
QFLIFSDGSDEELRELLALPNVRRAFYGNAYADMYAISRCKWVIASDSTFSAWGAFIGER
EEEEEECCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHEEEEECCCCHHHHHHHHCCC
PILFNKRHFKRVYRNSVPEAVLGDSTRIPDEFKALL
CEEECHHHHHHHHHCCCCCHHCCCCCCCCHHHHHCC
>Mature Secondary Structure
MESEKTYFYPVLSDYDFGWFRLSGPGLANCMFVAARAYILSRRENAGYISPTWTKLSPGT
CCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
FLRREKDKRVYFKIFNELGIKGLKKVQLLLAEKLRPGSGKVKQIRGMGEYFDDLNEHMDL
HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VHEFIEKITRKEIIENVRPEALKDCIAIHVRLGDYSPEMRVDILWYVNLVREILSIKPSQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC
QFLIFSDGSDEELRELLALPNVRRAFYGNAYADMYAISRCKWVIASDSTFSAWGAFIGER
EEEEEECCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHEEEEECCCCHHHHHHHHCCC
PILFNKRHFKRVYRNSVPEAVLGDSTRIPDEFKALL
CEEECHHHHHHHHHCCCCCHHCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA