Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736523
Identifier: 187736523
GI number: 187736523
Start: 2486695
End: 2487450
Strand: Direct
Name: 187736523
Synonym: Amuc_2044
Alternate gene names: NA
Gene position: 2486695-2487450 (Clockwise)
Preceding gene: 187736522
Following gene: 187736524
Centisome position: 93.34
GC content: 53.44
Gene sequence:
>756_bases ATGAAGACTAAATATCTTGCCCTCCTGATCGCCGCCATGGGAAGCAGCCTGTCCTTCGGGGCTTCCATCGACGGCCTGGA CGCGGCTTATTCAAAAGATTCCACCGTCTATGACGGAACCTCCGGCGATGCGTTGACTGTATCCTCCCCCACGACTATTG GCGTAAACAACACCGCCCACTGGACAATGGCTTTCACGATTTCCGGTCTGGGAAGCACTTCAGAGTCAAATGTAGGATTG CTGTTTACCTATAATACCGGCTCTTACAAAAATCTGGAAGGGTTGGGGTTTCAACTTTCGGAGTCAGGAGATCTCACCCT GTGCGCCGGAGGTTTTGCTTACAACGGAGGCTCTAATTCCTCCCCCTGGAAAGCACAAACGTTTTCCGATTATTCCACCA GCAAGCCTCTGACCCTGTTTTACACATTCAATGCAGGGAATGTCTCTATCTCCGCCATGCTGGGCAACGACACATCCACA CTGACCACGCTGACCACATTGAGCAGCGGCGCTTCCTTCAGCAACCAAAACATGACCCAGATCAATTTTTCCGCCAAAGA CGCCTCCGGAAACACATGGAGCGCTCCGAACGGAATCACGGGAGAATACACCTTGAATAATTTTGACCTGTACACGGCCG TTTTGACAGAAGACCAGATGAGGGAATATGCCCTGAGCGCCGTTCCGGAACCGGCTGCGGCCTCTCTCGGCCTGCTGGGG CTGGGTATCTTTCTGATGCGCCGCCGCAGGGCCTGA
Upstream 100 bases:
>100_bases TCAAATAACACACTTATCATCAATATTTTTAATTGTTGGCGGATTAGGAATCCGATAAAAAGCGGAATCCCTTTATGCAA GGGCTTTTCTACCAATTGAC
Downstream 100 bases:
>100_bases CTTTTTCCTTATCGCGTCCATTCCTGCTCCGTTCAGGGATGGACGTTTTCTTAACTCTTTTTCAAATATCCTTTTCATTT TTCCTTGACGCTCTGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKTKYLALLIAAMGSSLSFGASIDGLDAAYSKDSTVYDGTSGDALTVSSPTTIGVNNTAHWTMAFTISGLGSTSESNVGL LFTYNTGSYKNLEGLGFQLSESGDLTLCAGGFAYNGGSNSSPWKAQTFSDYSTSKPLTLFYTFNAGNVSISAMLGNDTST LTTLTTLSSGASFSNQNMTQINFSAKDASGNTWSAPNGITGEYTLNNFDLYTAVLTEDQMREYALSAVPEPAAASLGLLG LGIFLMRRRRA
Sequences:
>Translated_251_residues MKTKYLALLIAAMGSSLSFGASIDGLDAAYSKDSTVYDGTSGDALTVSSPTTIGVNNTAHWTMAFTISGLGSTSESNVGL LFTYNTGSYKNLEGLGFQLSESGDLTLCAGGFAYNGGSNSSPWKAQTFSDYSTSKPLTLFYTFNAGNVSISAMLGNDTST LTTLTTLSSGASFSNQNMTQINFSAKDASGNTWSAPNGITGEYTLNNFDLYTAVLTEDQMREYALSAVPEPAAASLGLLG LGIFLMRRRRA >Mature_251_residues MKTKYLALLIAAMGSSLSFGASIDGLDAAYSKDSTVYDGTSGDALTVSSPTTIGVNNTAHWTMAFTISGLGSTSESNVGL LFTYNTGSYKNLEGLGFQLSESGDLTLCAGGFAYNGGSNSSPWKAQTFSDYSTSKPLTLFYTFNAGNVSISAMLGNDTST LTTLTTLSSGASFSNQNMTQINFSAKDASGNTWSAPNGITGEYTLNNFDLYTAVLTEDQMREYALSAVPEPAAASLGLLG LGIFLMRRRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26341; Mature: 26341
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKYLALLIAAMGSSLSFGASIDGLDAAYSKDSTVYDGTSGDALTVSSPTTIGVNNTAH CCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCEEECCCCCCEEEECCCCEEECCCCEE WTMAFTISGLGSTSESNVGLLFTYNTGSYKNLEGLGFQLSESGDLTLCAGGFAYNGGSNS EEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCEEECCCCCC SPWKAQTFSDYSTSKPLTLFYTFNAGNVSISAMLGNDTSTLTTLTTLSSGASFSNQNMTQ CCEEEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEE INFSAKDASGNTWSAPNGITGEYTLNNFDLYTAVLTEDQMREYALSAVPEPAAASLGLLG EEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEEECHHHHHHHHHHCCCCCHHHHHHHHH LGIFLMRRRRA HHHHHHHHCCC >Mature Secondary Structure MKTKYLALLIAAMGSSLSFGASIDGLDAAYSKDSTVYDGTSGDALTVSSPTTIGVNNTAH CCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCEEECCCCCCEEEECCCCEEECCCCEE WTMAFTISGLGSTSESNVGLLFTYNTGSYKNLEGLGFQLSESGDLTLCAGGFAYNGGSNS EEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCEEECCCCCC SPWKAQTFSDYSTSKPLTLFYTFNAGNVSISAMLGNDTSTLTTLTTLSSGASFSNQNMTQ CCEEEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEE INFSAKDASGNTWSAPNGITGEYTLNNFDLYTAVLTEDQMREYALSAVPEPAAASLGLLG EEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEEECHHHHHHHHHHCCCCCHHHHHHHHH LGIFLMRRRRA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA