| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is mrp [H]
Identifier: 187736516
GI number: 187736516
Start: 2473889
End: 2474965
Strand: Reverse
Name: mrp [H]
Synonym: Amuc_2037
Alternate gene names: 187736516
Gene position: 2474965-2473889 (Counterclockwise)
Preceding gene: 187736517
Following gene: 187736515
Centisome position: 92.9
GC content: 56.82
Gene sequence:
>1077_bases ATGACGACACAACAGGAATTGACTCCGGAATTGATACGGGCTGCGCTGACCACGGTAAAATTTCCGGGGTTCAGCCGTGA TATCGTATCTTTCGGGCTGGTGAAAAAGATTGACATTGACGCTGAAAACAACGTCACGATTGATTTAGTGATTGAGAGCA AGAATGCGGATATTCCCCGTTACATTTTTGAAGGCGTTCACGGCGTGATGAAACATTTGCCCGGCGTGAAGCATTGTGAC GTCAATATCGAGCATAAGGCTCCGGAAGCCAGGAAGGGAATCAATGACGACCCCTCTACCTGGAAATCCTCCGTTCCCGG AGCCAAGCATGTCATTGCCGTGGCTTCCGGCAAGGGCGGCGTGGGCAAATCCACCGTTTCCGCGAACCTGGCGGTGGCTC TGAGCAAGCTGGGGTATTCCGTCGGTCTGGTGGACCTGGATATTTACGGCCCTTCCATGTCCCTGATGTTCGGCACCAAG GAACGCCCCGGAGCCAATGAGAATGACGAATTTATCCCGGTAACGGCCCATGGCGTGAAACTTCTTTCCATGGGGCTGCT GATTAATGAATCCGATCCTGTGGCGGTGCGCGGTCCCCTGGCGACACGCTACGTCCAGCAGTTCCTGCGCAACGTGGCAT GGGGGGATGTGGATTTTCTGATTCTGGACCTGCCTCCCGGCACCGGAGACATTCAGCTGACTATTGTCCAGACGGCCGAA CTGGACGGCGTGGTGGTGGTGACCACCCCGCAGGAAGTGGCGCTGATTGATGCCCGCAAGGCGATCGGTCTCTTTGAACG GGTGGAAACCCCCATTCTGGGCATAATTGAAAACATGAGTTATTTCCAGTGCCCCTCTGACGGCAAGATTTACCATATCT TTGGCGAAGGAGGCGGCGAACGGGAAGCGGCTAAGCTGGGAGTGCCCCTGCTCGGCAAGATTCCGCTGGATATTTCCACC CGCTCCGGCGGGGACGAAGGCCGCCCCGTGGCCCTGGAAGAGCCCGGGCAGAATCCGGTTTCCGCCGCGTTCCGCCAGGT GGCTGAACAATGCGCTCGTGTGGTGCTTGACCGCTGA
Upstream 100 bases:
>100_bases CTTCCCGGTTTTGCCGTCCCCTTTTTTCATATTCCGGAGCATTCTGCATGCCGGAGGCACGGGGCCGGAATGTTGATGCA ACCATGAATATTTCAGATAT
Downstream 100 bases:
>100_bases ATGCCCGGACGGGGCGGGAGGCCCGGTACGGTTGGCAACCTTTAACTTTAAAGCCGGATTGGAGCCTGCCGCTCTGGTCC GGCTTGTTTGCCGGCATGTT
Product: Cobyrinic acid ac-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTTQQELTPELIRAALTTVKFPGFSRDIVSFGLVKKIDIDAENNVTIDLVIESKNADIPRYIFEGVHGVMKHLPGVKHCD VNIEHKAPEARKGINDDPSTWKSSVPGAKHVIAVASGKGGVGKSTVSANLAVALSKLGYSVGLVDLDIYGPSMSLMFGTK ERPGANENDEFIPVTAHGVKLLSMGLLINESDPVAVRGPLATRYVQQFLRNVAWGDVDFLILDLPPGTGDIQLTIVQTAE LDGVVVVTTPQEVALIDARKAIGLFERVETPILGIIENMSYFQCPSDGKIYHIFGEGGGEREAAKLGVPLLGKIPLDIST RSGGDEGRPVALEEPGQNPVSAAFRQVAEQCARVVLDR
Sequences:
>Translated_358_residues MTTQQELTPELIRAALTTVKFPGFSRDIVSFGLVKKIDIDAENNVTIDLVIESKNADIPRYIFEGVHGVMKHLPGVKHCD VNIEHKAPEARKGINDDPSTWKSSVPGAKHVIAVASGKGGVGKSTVSANLAVALSKLGYSVGLVDLDIYGPSMSLMFGTK ERPGANENDEFIPVTAHGVKLLSMGLLINESDPVAVRGPLATRYVQQFLRNVAWGDVDFLILDLPPGTGDIQLTIVQTAE LDGVVVVTTPQEVALIDARKAIGLFERVETPILGIIENMSYFQCPSDGKIYHIFGEGGGEREAAKLGVPLLGKIPLDIST RSGGDEGRPVALEEPGQNPVSAAFRQVAEQCARVVLDR >Mature_357_residues TTQQELTPELIRAALTTVKFPGFSRDIVSFGLVKKIDIDAENNVTIDLVIESKNADIPRYIFEGVHGVMKHLPGVKHCDV NIEHKAPEARKGINDDPSTWKSSVPGAKHVIAVASGKGGVGKSTVSANLAVALSKLGYSVGLVDLDIYGPSMSLMFGTKE RPGANENDEFIPVTAHGVKLLSMGLLINESDPVAVRGPLATRYVQQFLRNVAWGDVDFLILDLPPGTGDIQLTIVQTAEL DGVVVVTTPQEVALIDARKAIGLFERVETPILGIIENMSYFQCPSDGKIYHIFGEGGGEREAAKLGVPLLGKIPLDISTR SGGDEGRPVALEEPGQNPVSAAFRQVAEQCARVVLDR
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=252, Percent_Identity=42.4603174603175, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI118572611, Length=257, Percent_Identity=40.4669260700389, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI6912540, Length=251, Percent_Identity=38.6454183266932, Blast_Score=175, Evalue=6e-44, Organism=Escherichia coli, GI87082045, Length=353, Percent_Identity=37.1104815864023, Blast_Score=232, Evalue=2e-62, Organism=Caenorhabditis elegans, GI25143050, Length=251, Percent_Identity=37.0517928286853, Blast_Score=161, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6322188, Length=224, Percent_Identity=40.625, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6321347, Length=266, Percent_Identity=37.9699248120301, Blast_Score=155, Evalue=8e-39, Organism=Drosophila melanogaster, GI24667611, Length=217, Percent_Identity=44.2396313364055, Blast_Score=177, Evalue=9e-45, Organism=Drosophila melanogaster, GI221511043, Length=254, Percent_Identity=37.4015748031496, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI19921440, Length=237, Percent_Identity=39.2405063291139, Blast_Score=139, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 38380; Mature: 38249
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQQELTPELIRAALTTVKFPGFSRDIVSFGLVKKIDIDAENNVTIDLVIESKNADIPR CCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCCCCCEEEEEEEECCCCCCHH YIFEGVHGVMKHLPGVKHCDVNIEHKAPEARKGINDDPSTWKSSVPGAKHVIAVASGKGG HHHHHHHHHHHHCCCCEECCEEECCCCCHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCC VGKSTVSANLAVALSKLGYSVGLVDLDIYGPSMSLMFGTKERPGANENDEFIPVTAHGVK CCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEHHHHE LLSMGLLINESDPVAVRGPLATRYVQQFLRNVAWGDVDFLILDLPPGTGDIQLTIVQTAE EEHCCEEEECCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEEEC LDGVVVVTTPQEVALIDARKAIGLFERVETPILGIIENMSYFQCPSDGKIYHIFGEGGGE CCCEEEEECCCCEEEEHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCCEEEEECCCCCC REAAKLGVPLLGKIPLDISTRSGGDEGRPVALEEPGQNPVSAAFRQVAEQCARVVLDR CCHHHCCCCEEECCCEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTQQELTPELIRAALTTVKFPGFSRDIVSFGLVKKIDIDAENNVTIDLVIESKNADIPR CCHHHCCHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCCCCCEEEEEEEECCCCCCHH YIFEGVHGVMKHLPGVKHCDVNIEHKAPEARKGINDDPSTWKSSVPGAKHVIAVASGKGG HHHHHHHHHHHHCCCCEECCEEECCCCCHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCC VGKSTVSANLAVALSKLGYSVGLVDLDIYGPSMSLMFGTKERPGANENDEFIPVTAHGVK CCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEHHHHE LLSMGLLINESDPVAVRGPLATRYVQQFLRNVAWGDVDFLILDLPPGTGDIQLTIVQTAE EEHCCEEEECCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEEEC LDGVVVVTTPQEVALIDARKAIGLFERVETPILGIIENMSYFQCPSDGKIYHIFGEGGGE CCCEEEEECCCCEEEEHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCCEEEEECCCCCC REAAKLGVPLLGKIPLDISTRSGGDEGRPVALEEPGQNPVSAAFRQVAEQCARVVLDR CCHHHCCCCEEECCCEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]