Click here to switch to the map view.

The map label for this gene is 187736488

Identifier: 187736488

GI number: 187736488

Start: 2439325

End: 2440260

Strand: Reverse

Name: 187736488

Synonym: Amuc_2009

Alternate gene names: NA

Gene position: 2440260-2439325 (Counterclockwise)

Preceding gene: 187736489

Following gene: 187736487

Centisome position: 91.6

GC content: 52.88

Gene sequence:

>936_bases
ATGTCATACCATATTCTAAGCATAGATGCCTATACATGCCATCTGAGCTGCGACAAGGGCCAACTCAGATGCGCGGATGG
AGAGAATTCTCCCCGAACGATTCCGCTGGAGGATGTGGGGGCTGTTGTGCTCAGTTCTTTTAAGGCGACGCTCACGAGCA
ATTTGCTGATAGAACTGGCCAGGAAGAGAATAGGATTTGTGCTGTGTGAAAGCTACAGGCCTGCCGTGCTGCTCCTGCCA
GCGGATCGGTCTACGGATACCGGTCTGCTAAGACATCTGGCGGATATGCCGGCCCGTTTGCGGAACCGCCTTTGGCAAAA
GACTTTGGATGCCAAGTGTGGGAATCAGACGGCTCTGGCCCAAGCATGGAATCCGCATCATCCCGCCATTGCGGAGCTGA
AGAGAATGGCCGTGACGGAAAAGACGGCGAGGGAAGCAGAGTGCGCCCGCCTGTTCTGGAGCGTATTTGCGGATACATGG
GCAAACTCCGATTTTCGCAGGGGACGTCATGAGGAGGGGTTTAATAACCTCTTCAACTATGCGTACGCTATTCTGTTGTC
TTGCATATTGCAATATCTCTTTGCTCTGGGGCTGGATCCCTGCTTCGGCATTTTTCATCAATCCCGGGAACATGCGGCGC
CTTTGGCTTATGATCTGATGGAACCCTTCAGGCCTGCCTTTGACGCCAATGTGGCCCGTTGGATTCATTTGTGCCTGCGG
GAAGGAAAAACAGAAGAGAGAGCAGGAGAAATCACCCGTGAGTTCAGGCAACATATTACAGCCACCTTGCAGGCTTCTGT
CATGTACCGGGATAAACAGCTGCCGTTGAAAGCGGCGGTAGAGGCCGTTTGCCGCAGTTTCCGCAAAGCAGTTCTTGCCG
GACAATCCGAACCGTATGAACCATGGCTTATGACAACTATAAAATGGGCTGGCTAG

Upstream 100 bases:

>100_bases
TGTAATTGGCGTGAAGTAGATCTCATTTCTTTATTAAAAAAATACCAGATGAAAAGATACCCTACTTCTTATACGGGAAC
TCCACGATAAGGCATTTTAC

Downstream 100 bases:

>100_bases
TTGTGTTCTTTGATCTTCCCACAACCACGCCGGAAGATAAAAAAAACTATCAATATTTCCGTAAGGCTCTTTTAGAAGAC
GGCTATACGATGATTCAGTA

Product: CRISPR-associated protein Cas1

Products: NA

Alternate protein names: CRISPR-Associated Protein; Crispr-; CRISPR-Associated Protein Cas1 Family; CRISPR Associated Protein

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSYHILSIDAYTCHLSCDKGQLRCADGENSPRTIPLEDVGAVVLSSFKATLTSNLLIELARKRIGFVLCESYRPAVLLLP
ADRSTDTGLLRHLADMPARLRNRLWQKTLDAKCGNQTALAQAWNPHHPAIAELKRMAVTEKTAREAECARLFWSVFADTW
ANSDFRRGRHEEGFNNLFNYAYAILLSCILQYLFALGLDPCFGIFHQSREHAAPLAYDLMEPFRPAFDANVARWIHLCLR
EGKTEERAGEITREFRQHITATLQASVMYRDKQLPLKAAVEAVCRSFRKAVLAGQSEPYEPWLMTTIKWAG

Sequences:

>Translated_311_residues
MSYHILSIDAYTCHLSCDKGQLRCADGENSPRTIPLEDVGAVVLSSFKATLTSNLLIELARKRIGFVLCESYRPAVLLLP
ADRSTDTGLLRHLADMPARLRNRLWQKTLDAKCGNQTALAQAWNPHHPAIAELKRMAVTEKTAREAECARLFWSVFADTW
ANSDFRRGRHEEGFNNLFNYAYAILLSCILQYLFALGLDPCFGIFHQSREHAAPLAYDLMEPFRPAFDANVARWIHLCLR
EGKTEERAGEITREFRQHITATLQASVMYRDKQLPLKAAVEAVCRSFRKAVLAGQSEPYEPWLMTTIKWAG
>Mature_310_residues
SYHILSIDAYTCHLSCDKGQLRCADGENSPRTIPLEDVGAVVLSSFKATLTSNLLIELARKRIGFVLCESYRPAVLLLPA
DRSTDTGLLRHLADMPARLRNRLWQKTLDAKCGNQTALAQAWNPHHPAIAELKRMAVTEKTAREAECARLFWSVFADTWA
NSDFRRGRHEEGFNNLFNYAYAILLSCILQYLFALGLDPCFGIFHQSREHAAPLAYDLMEPFRPAFDANVARWIHLCLRE
GKTEERAGEITREFRQHITATLQASVMYRDKQLPLKAAVEAVCRSFRKAVLAGQSEPYEPWLMTTIKWAG

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35259; Mature: 35128

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYHILSIDAYTCHLSCDKGQLRCADGENSPRTIPLEDVGAVVLSSFKATLTSNLLIELA
CCEEEEEEEEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RKRIGFVLCESYRPAVLLLPADRSTDTGLLRHLADMPARLRNRLWQKTLDAKCGNQTALA
HHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHH
QAWNPHHPAIAELKRMAVTEKTAREAECARLFWSVFADTWANSDFRRGRHEEGFNNLFNY
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH
AYAILLSCILQYLFALGLDPCFGIFHQSREHAAPLAYDLMEPFRPAFDANVARWIHLCLR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHH
EGKTEERAGEITREFRQHITATLQASVMYRDKQLPLKAAVEAVCRSFRKAVLAGQSEPYE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PWLMTTIKWAG
CHHHHEEECCC
>Mature Secondary Structure 
SYHILSIDAYTCHLSCDKGQLRCADGENSPRTIPLEDVGAVVLSSFKATLTSNLLIELA
CEEEEEEEEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RKRIGFVLCESYRPAVLLLPADRSTDTGLLRHLADMPARLRNRLWQKTLDAKCGNQTALA
HHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHH
QAWNPHHPAIAELKRMAVTEKTAREAECARLFWSVFADTWANSDFRRGRHEEGFNNLFNY
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH
AYAILLSCILQYLFALGLDPCFGIFHQSREHAAPLAYDLMEPFRPAFDANVARWIHLCLR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHH
EGKTEERAGEITREFRQHITATLQASVMYRDKQLPLKAAVEAVCRSFRKAVLAGQSEPYE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PWLMTTIKWAG
CHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA