Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736476
Identifier: 187736476
GI number: 187736476
Start: 2424208
End: 2424801
Strand: Direct
Name: 187736476
Synonym: Amuc_1996
Alternate gene names: NA
Gene position: 2424208-2424801 (Clockwise)
Preceding gene: 187736474
Following gene: 187736482
Centisome position: 91.0
GC content: 59.93
Gene sequence:
>594_bases ATGAAAAAATACTGGAAATTGATTCAACAGCACCTGAGCGTGGATGCGGACGGCATCCCCGGCCCCAAGACGGCGCTGGC CCTGCTGGACAGGCTGGGCATCCGCCAACCGGAACAATCCTGGCCCAGCCAGGAGGAAGTGCGCTCCGGGAAATCCGTCT TCGGCCGTGCGGGTGATGAAAGCAACATGACCAGCATCAAGCTGCCTTATATCATGCGGCTGGCGTGGGAAACAAACACG ACCGTTTCCACCATGCGCTGCCACAAGCTGGTGGCGGAACCGCTCGTCCGCATCTTCCAGGCTACTCTGGACCATTACGG CATGGAGAAAATCAGGGAACTGGGGCTGGACCTGTACGGCGGCTGCTTCAACAACCGCTCCATCATCGGCGGAAAGGCCA CATCCATGCACGCCTGGGGAATCGCCGTGGACATAGACCCGGACAGAAACGGCCTGAACATCCCCGCGCCGAAAGCGGTA TTGTCCGGACCGGAGTACGCCGCCTTCTGGCAATTCGTGGAAGCGGAGGGGGCCGTATCCCTGGGACGCTCCCGCGACTA CGACTGGATGCACTTCCAGTTCTCTACTCTTTGA
Upstream 100 bases:
>100_bases AGGACAAACGGCCTTTTTTTGCCTCCCGCCGTAAAGGCAGGAATGACGCTGGAAGGAAAAATGTGGAACTTTCCGGAGGG AGTTTCTAGCGTGGCTCCCT
Downstream 100 bases:
>100_bases CCGGAGTGGACGCGAACGTCCTCCAGCCCTCCTCCCAGCGGCGGCGGAGGGCTGGCCAGTCCTCACCGTTCCCTCCATGC CCCAGGAAAGAGCGCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKKYWKLIQQHLSVDADGIPGPKTALALLDRLGIRQPEQSWPSQEEVRSGKSVFGRAGDESNMTSIKLPYIMRLAWETNT TVSTMRCHKLVAEPLVRIFQATLDHYGMEKIRELGLDLYGGCFNNRSIIGGKATSMHAWGIAVDIDPDRNGLNIPAPKAV LSGPEYAAFWQFVEAEGAVSLGRSRDYDWMHFQFSTL
Sequences:
>Translated_197_residues MKKYWKLIQQHLSVDADGIPGPKTALALLDRLGIRQPEQSWPSQEEVRSGKSVFGRAGDESNMTSIKLPYIMRLAWETNT TVSTMRCHKLVAEPLVRIFQATLDHYGMEKIRELGLDLYGGCFNNRSIIGGKATSMHAWGIAVDIDPDRNGLNIPAPKAV LSGPEYAAFWQFVEAEGAVSLGRSRDYDWMHFQFSTL >Mature_197_residues MKKYWKLIQQHLSVDADGIPGPKTALALLDRLGIRQPEQSWPSQEEVRSGKSVFGRAGDESNMTSIKLPYIMRLAWETNT TVSTMRCHKLVAEPLVRIFQATLDHYGMEKIRELGLDLYGGCFNNRSIIGGKATSMHAWGIAVDIDPDRNGLNIPAPKAV LSGPEYAAFWQFVEAEGAVSLGRSRDYDWMHFQFSTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22101; Mature: 22101
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYWKLIQQHLSVDADGIPGPKTALALLDRLGIRQPEQSWPSQEEVRSGKSVFGRAGDE CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHCCHHHHCCCCCC SNMTSIKLPYIMRLAWETNTTVSTMRCHKLVAEPLVRIFQATLDHYGMEKIRELGLDLYG CCCEEEECHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC GCFNNRSIIGGKATSMHAWGIAVDIDPDRNGLNIPAPKAVLSGPEYAAFWQFVEAEGAVS CCCCCCEEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCC LGRSRDYDWMHFQFSTL CCCCCCCCEEEEEEECC >Mature Secondary Structure MKKYWKLIQQHLSVDADGIPGPKTALALLDRLGIRQPEQSWPSQEEVRSGKSVFGRAGDE CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHCCHHHHCCCCCC SNMTSIKLPYIMRLAWETNTTVSTMRCHKLVAEPLVRIFQATLDHYGMEKIRELGLDLYG CCCEEEECHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC GCFNNRSIIGGKATSMHAWGIAVDIDPDRNGLNIPAPKAVLSGPEYAAFWQFVEAEGAVS CCCCCCEEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCC LGRSRDYDWMHFQFSTL CCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA