Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736476

Identifier: 187736476

GI number: 187736476

Start: 2424208

End: 2424801

Strand: Direct

Name: 187736476

Synonym: Amuc_1996

Alternate gene names: NA

Gene position: 2424208-2424801 (Clockwise)

Preceding gene: 187736474

Following gene: 187736482

Centisome position: 91.0

GC content: 59.93

Gene sequence:

>594_bases
ATGAAAAAATACTGGAAATTGATTCAACAGCACCTGAGCGTGGATGCGGACGGCATCCCCGGCCCCAAGACGGCGCTGGC
CCTGCTGGACAGGCTGGGCATCCGCCAACCGGAACAATCCTGGCCCAGCCAGGAGGAAGTGCGCTCCGGGAAATCCGTCT
TCGGCCGTGCGGGTGATGAAAGCAACATGACCAGCATCAAGCTGCCTTATATCATGCGGCTGGCGTGGGAAACAAACACG
ACCGTTTCCACCATGCGCTGCCACAAGCTGGTGGCGGAACCGCTCGTCCGCATCTTCCAGGCTACTCTGGACCATTACGG
CATGGAGAAAATCAGGGAACTGGGGCTGGACCTGTACGGCGGCTGCTTCAACAACCGCTCCATCATCGGCGGAAAGGCCA
CATCCATGCACGCCTGGGGAATCGCCGTGGACATAGACCCGGACAGAAACGGCCTGAACATCCCCGCGCCGAAAGCGGTA
TTGTCCGGACCGGAGTACGCCGCCTTCTGGCAATTCGTGGAAGCGGAGGGGGCCGTATCCCTGGGACGCTCCCGCGACTA
CGACTGGATGCACTTCCAGTTCTCTACTCTTTGA

Upstream 100 bases:

>100_bases
AGGACAAACGGCCTTTTTTTGCCTCCCGCCGTAAAGGCAGGAATGACGCTGGAAGGAAAAATGTGGAACTTTCCGGAGGG
AGTTTCTAGCGTGGCTCCCT

Downstream 100 bases:

>100_bases
CCGGAGTGGACGCGAACGTCCTCCAGCCCTCCTCCCAGCGGCGGCGGAGGGCTGGCCAGTCCTCACCGTTCCCTCCATGC
CCCAGGAAAGAGCGCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKKYWKLIQQHLSVDADGIPGPKTALALLDRLGIRQPEQSWPSQEEVRSGKSVFGRAGDESNMTSIKLPYIMRLAWETNT
TVSTMRCHKLVAEPLVRIFQATLDHYGMEKIRELGLDLYGGCFNNRSIIGGKATSMHAWGIAVDIDPDRNGLNIPAPKAV
LSGPEYAAFWQFVEAEGAVSLGRSRDYDWMHFQFSTL

Sequences:

>Translated_197_residues
MKKYWKLIQQHLSVDADGIPGPKTALALLDRLGIRQPEQSWPSQEEVRSGKSVFGRAGDESNMTSIKLPYIMRLAWETNT
TVSTMRCHKLVAEPLVRIFQATLDHYGMEKIRELGLDLYGGCFNNRSIIGGKATSMHAWGIAVDIDPDRNGLNIPAPKAV
LSGPEYAAFWQFVEAEGAVSLGRSRDYDWMHFQFSTL
>Mature_197_residues
MKKYWKLIQQHLSVDADGIPGPKTALALLDRLGIRQPEQSWPSQEEVRSGKSVFGRAGDESNMTSIKLPYIMRLAWETNT
TVSTMRCHKLVAEPLVRIFQATLDHYGMEKIRELGLDLYGGCFNNRSIIGGKATSMHAWGIAVDIDPDRNGLNIPAPKAV
LSGPEYAAFWQFVEAEGAVSLGRSRDYDWMHFQFSTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22101; Mature: 22101

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYWKLIQQHLSVDADGIPGPKTALALLDRLGIRQPEQSWPSQEEVRSGKSVFGRAGDE
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHCCHHHHCCCCCC
SNMTSIKLPYIMRLAWETNTTVSTMRCHKLVAEPLVRIFQATLDHYGMEKIRELGLDLYG
CCCEEEECHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
GCFNNRSIIGGKATSMHAWGIAVDIDPDRNGLNIPAPKAVLSGPEYAAFWQFVEAEGAVS
CCCCCCEEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCC
LGRSRDYDWMHFQFSTL
CCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKKYWKLIQQHLSVDADGIPGPKTALALLDRLGIRQPEQSWPSQEEVRSGKSVFGRAGDE
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHCCHHHHCCCCCC
SNMTSIKLPYIMRLAWETNTTVSTMRCHKLVAEPLVRIFQATLDHYGMEKIRELGLDLYG
CCCEEEECHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
GCFNNRSIIGGKATSMHAWGIAVDIDPDRNGLNIPAPKAVLSGPEYAAFWQFVEAEGAVS
CCCCCCEEECCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCC
LGRSRDYDWMHFQFSTL
CCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA