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The map label for this gene is tnaA [H]

Identifier: 187736475

GI number: 187736475

Start: 2422591

End: 2424054

Strand: Reverse

Name: tnaA [H]

Synonym: Amuc_1995

Alternate gene names: 187736475

Gene position: 2424054-2422591 (Counterclockwise)

Preceding gene: 187736477

Following gene: 187736472

Centisome position: 90.99

GC content: 58.67

Gene sequence:

>1464_bases
ATGAATTCAGAACCATCCAACGTTGTCAAATTTTACAATGGGGAACAAATTCCCCTGGAACTGCATAAAGTCCGCGTGGT
GCAGAAGCTGCATCTTGTCCCCGTGGAACGCCGCCTGGAAGCCGCACGGGAAGCCGGGTTCAACACCTTCCAGCTCAGCA
CGAACGATGTCTATCTGGACATGCTGACGGATTCCGGCGTCAACGCCATGAGCGACAACCAGATCGCCGCCATGTTCCGG
GCGGATGACGCCTATGCCGGTTCCCAGAGCTTTGACCGCCTGAAGCAGGCTGTCCGGGATGTCTTCGGCAAGGAATACCT
TCTGCCCGCCCACCAGGGGCGCGCCTGTGAAAACATCATTGCCCGCACCTTCGTGAAGCCCGGGGACGTGGTTCCAATGA
ACTACCATTTCACCACCACGCACGCCCATATTGACCTGAACGGCGGCAAGATTGAGGAACTGGTGGCTGATGAAGCCGTC
AATCCGGTCAGCACCAATCCCTTCAAGGGCAATCTGGACCCCGGCAAGCTGCGGGACTGCATTGCCCGTCACGGGGCGGG
CAAAATCCCCTTCGTGCGCATGGAAGCCTCAACCAACCTGATTGGCGGCCAGCCCTTCTCCATTGCCAACATGCGGGAAA
TCCGCGGCATTTGCGATGAATTCGGCATCATGCTGGTGCTGGACGCCTCCCTGATCGGGGAAAACGCCTACTTCATCAAG
ATGCGTGAAGACGAGTTCAGGGATGCGTCCTGCGCGGACATCCTGAAGACCATGTGCGGACTGGCGGATCTGGTGTATTT
TTCCGCCCGCAAGGTTTCCTCCTCCCGCGGCGGCGGCATCTGCACGAACGACCGGGCCATTGCCAAGAAAATGGAGCATC
TCGTTCCCCTCTTTGAAGGCTTTTTGACTTATGGCGGCATCTCCGTGCGGGAAATTGAGGCCATGGCCGTAGGCCTGTAT
GAAACCACGGATTTGACTGTGATTTCCCAGAGCCCCTCCTTCATTGAATATTTCATCGGCCAGATGGTGGACATGGGCAT
TCCCTGCGTAACCCCCGCTGGCGGTCTGGGCGCCCATATTGACGCAGGGCGTTTCCTGCCCCATATCCCGCAGGAGGACT
ATCCCGCCGGGGCTCTGGCGGCGGCTTTCTTCATCGCCTCCGGCGTGCGCGGCATGGAACGCGGCACGCTTTCCAGCGTC
CGCGACGAAAAAGGCAAGGACATTCTGGCGGATGTGGAACTGCTCCGCCTGGCCTTCCCGCGCCGTGTTTTCACGTTATC
CCAGGTGAAATATGTGGCGGACCGCATGAAGTGGCTCTATGACAACCGCGATTTGATTGGCGGCCTGGAATTTGTGGAGG
AACCGCCCGTCCTGCGCTTCTTCATGGGCAAGCTCCGCGCCAAGAGCGACTGGCCTGAAAAACTGGCGGCCAAATACCGC
CGGGACTTCGGGGAAAGCCTGTAA

Upstream 100 bases:

>100_bases
GTCATTCCTGCCTTTACGGCGGGAGGCAAAAAAAGGCCGTTTGTCCTTTTATGTTGCGGAAAAGATTCATTCTGCTACAC
TTTTGTTTACCTTTTATTTT

Downstream 100 bases:

>100_bases
AGGCTGGTTCTCCCGTTCAATTCCGGATTGGCAAGGGCTGGACCGTCAGGTTCAGCCCTTGTTGCGTTGGGGGGGGCGTG
TCTTTGCGGACATCACCCTT

Product: tryptophanase

Products: NA

Alternate protein names: Beta-tyrosinase [H]

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MNSEPSNVVKFYNGEQIPLELHKVRVVQKLHLVPVERRLEAAREAGFNTFQLSTNDVYLDMLTDSGVNAMSDNQIAAMFR
ADDAYAGSQSFDRLKQAVRDVFGKEYLLPAHQGRACENIIARTFVKPGDVVPMNYHFTTTHAHIDLNGGKIEELVADEAV
NPVSTNPFKGNLDPGKLRDCIARHGAGKIPFVRMEASTNLIGGQPFSIANMREIRGICDEFGIMLVLDASLIGENAYFIK
MREDEFRDASCADILKTMCGLADLVYFSARKVSSSRGGGICTNDRAIAKKMEHLVPLFEGFLTYGGISVREIEAMAVGLY
ETTDLTVISQSPSFIEYFIGQMVDMGIPCVTPAGGLGAHIDAGRFLPHIPQEDYPAGALAAAFFIASGVRGMERGTLSSV
RDEKGKDILADVELLRLAFPRRVFTLSQVKYVADRMKWLYDNRDLIGGLEFVEEPPVLRFFMGKLRAKSDWPEKLAAKYR
RDFGESL

Sequences:

>Translated_487_residues
MNSEPSNVVKFYNGEQIPLELHKVRVVQKLHLVPVERRLEAAREAGFNTFQLSTNDVYLDMLTDSGVNAMSDNQIAAMFR
ADDAYAGSQSFDRLKQAVRDVFGKEYLLPAHQGRACENIIARTFVKPGDVVPMNYHFTTTHAHIDLNGGKIEELVADEAV
NPVSTNPFKGNLDPGKLRDCIARHGAGKIPFVRMEASTNLIGGQPFSIANMREIRGICDEFGIMLVLDASLIGENAYFIK
MREDEFRDASCADILKTMCGLADLVYFSARKVSSSRGGGICTNDRAIAKKMEHLVPLFEGFLTYGGISVREIEAMAVGLY
ETTDLTVISQSPSFIEYFIGQMVDMGIPCVTPAGGLGAHIDAGRFLPHIPQEDYPAGALAAAFFIASGVRGMERGTLSSV
RDEKGKDILADVELLRLAFPRRVFTLSQVKYVADRMKWLYDNRDLIGGLEFVEEPPVLRFFMGKLRAKSDWPEKLAAKYR
RDFGESL
>Mature_487_residues
MNSEPSNVVKFYNGEQIPLELHKVRVVQKLHLVPVERRLEAAREAGFNTFQLSTNDVYLDMLTDSGVNAMSDNQIAAMFR
ADDAYAGSQSFDRLKQAVRDVFGKEYLLPAHQGRACENIIARTFVKPGDVVPMNYHFTTTHAHIDLNGGKIEELVADEAV
NPVSTNPFKGNLDPGKLRDCIARHGAGKIPFVRMEASTNLIGGQPFSIANMREIRGICDEFGIMLVLDASLIGENAYFIK
MREDEFRDASCADILKTMCGLADLVYFSARKVSSSRGGGICTNDRAIAKKMEHLVPLFEGFLTYGGISVREIEAMAVGLY
ETTDLTVISQSPSFIEYFIGQMVDMGIPCVTPAGGLGAHIDAGRFLPHIPQEDYPAGALAAAFFIASGVRGMERGTLSSV
RDEKGKDILADVELLRLAFPRRVFTLSQVKYVADRMKWLYDNRDLIGGLEFVEEPPVLRFFMGKLRAKSDWPEKLAAKYR
RDFGESL

Specific function: Tryptophan catabolism. [C]

COG id: COG3033

COG function: function code E; Tryptophanase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-eliminating lyase family [H]

Homologues:

Organism=Escherichia coli, GI87082323, Length=469, Percent_Identity=34.7547974413646, Blast_Score=288, Evalue=5e-79,

Paralogues:

None

Copy number: 7160 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 460 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001597
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011166
- InterPro:   IPR018176
- InterPro:   IPR013441 [H]

Pfam domain/function: PF01212 Beta_elim_lyase [H]

EC number: =4.1.99.2 [H]

Molecular weight: Translated: 54004; Mature: 54004

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSEPSNVVKFYNGEQIPLELHKVRVVQKLHLVPVERRLEAAREAGFNTFQLSTNDVYLD
CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEEE
MLTDSGVNAMSDNQIAAMFRADDAYAGSQSFDRLKQAVRDVFGKEYLLPAHQGRACENII
EEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHH
ARTFVKPGDVVPMNYHFTTTHAHIDLNGGKIEELVADEAVNPVSTNPFKGNLDPGKLRDC
HHHHCCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
IARHGAGKIPFVRMEASTNLIGGQPFSIANMREIRGICDEFGIMLVLDASLIGENAYFIK
HHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHHCCCEEEEE
MREDEFRDASCADILKTMCGLADLVYFSARKVSSSRGGGICTNDRAIAKKMEHLVPLFEG
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FLTYGGISVREIEAMAVGLYETTDLTVISQSPSFIEYFIGQMVDMGIPCVTPAGGLGAHI
HHHHCCCCCEEHHHHHEEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DAGRFLPHIPQEDYPAGALAAAFFIASGVRGMERGTLSSVRDEKGKDILADVELLRLAFP
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHH
RRVFTLSQVKYVADRMKWLYDNRDLIGGLEFVEEPPVLRFFMGKLRAKSDWPEKLAAKYR
HHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHH
RDFGESL
HHHCCCC
>Mature Secondary Structure
MNSEPSNVVKFYNGEQIPLELHKVRVVQKLHLVPVERRLEAAREAGFNTFQLSTNDVYLD
CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEEE
MLTDSGVNAMSDNQIAAMFRADDAYAGSQSFDRLKQAVRDVFGKEYLLPAHQGRACENII
EEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHH
ARTFVKPGDVVPMNYHFTTTHAHIDLNGGKIEELVADEAVNPVSTNPFKGNLDPGKLRDC
HHHHCCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
IARHGAGKIPFVRMEASTNLIGGQPFSIANMREIRGICDEFGIMLVLDASLIGENAYFIK
HHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHHCCCEEEEE
MREDEFRDASCADILKTMCGLADLVYFSARKVSSSRGGGICTNDRAIAKKMEHLVPLFEG
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FLTYGGISVREIEAMAVGLYETTDLTVISQSPSFIEYFIGQMVDMGIPCVTPAGGLGAHI
HHHHCCCCCEEHHHHHEEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DAGRFLPHIPQEDYPAGALAAAFFIASGVRGMERGTLSSVRDEKGKDILADVELLRLAFP
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHH
RRVFTLSQVKYVADRMKWLYDNRDLIGGLEFVEEPPVLRFFMGKLRAKSDWPEKLAAKYR
HHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHH
RDFGESL
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA