Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736467

Identifier: 187736467

GI number: 187736467

Start: 2413869

End: 2414870

Strand: Direct

Name: 187736467

Synonym: Amuc_1987

Alternate gene names: NA

Gene position: 2413869-2414870 (Clockwise)

Preceding gene: 187736466

Following gene: 187736468

Centisome position: 90.61

GC content: 58.08

Gene sequence:

>1002_bases
ATGAAAAATCCCCGCCTCCTGCTTACCGCTTTCTTGACCTGCTGCATGACGGCCGCACCGCAAAACGCAGCGGCCCAATC
CCCCATGAGAACGTCTTCTTCCGTGCCTCCCCAGGTGGAACTGATGTATGTGAAGGGACTACGCTATCTTCAGAATGCCC
AGAAAACGGATGGAACCTATGATGGAACTTACGGGAGGGAGCCCGGCATCATCGGCTTTTGCCTTATGTCCGTGCTGGCT
CACGGAGACGATCCGAACGCGGGGCCGTACGCCACCATGGTGCGCCGCTGCGTAGATTACATCCTGTCCAAGCAGAACAA
GGTATCCGGCTACATTGGGGATTCCATGTACAACCACGGCTTCGCCACTCTCGCCCTGGCGGAAGCCTACGGCATGGTGC
GGGACGACCGCATAGGCCCCGCCCTCCGCAAGGCCGTAGCTCTGACACTGACCGCCCAGAAAAAAAACAAAACGGGAGGC
TGGCGCTATTCCCCGGAATCCACGGACGCAGACAGCACGGTGACCGGCTGCCAGCTTGTCTCCCTGTTCGCGGCGCGCAA
CGCGGGCATTCCCGTGCCGGACGAGGCTTTTGAACGCGGCCTCAAGTACATGGCTTCCTGCCGCGACAAGAAAGGCGCCT
ACGGCTACACCGGGCCGGCGGGTCCCCGCGTCACCCTCACGGCCATCGGTTCCCTGACGCTGTCCCTGGCGCGCCTTAAA
ACGGACCCGTCCTTCAAGGATTCCCTGGCCTACCTGAAAAAGCACCTGAATTACCGGGATTCCACTTATCCGTTTTATTT
TGAATATTACATGTCACAGGCCCTGTTCCATGCGGACCAGGAAGTGTGGAAGGAATGGAATTACAAAAATATGCGCTATC
TGGGAGCCTCCCAGGCGCCCAACGGGTCCTGGCTTTCCGATCATTCCGCGGCATATTCCACTTCCGCCGCCCTGCTTTCC
CTTGCGCTTAATTACAGATTTCTACCCATCTATGAACAATAG

Upstream 100 bases:

>100_bases
TTCCGCAAGGCGCTGGACGCCTACAACAAGACTTTACAGAGGTAAAACGCCCCTCTCCGGACACAGCCCTTTCACGCATG
AACAGCAACTTCCCGTTTCC

Downstream 100 bases:

>100_bases
AATCCGCCTTTCCCTGCTGCTGGCCCCGGCCTGCCTGCTGACCGCCTGGGCCAATTCCGTCATCGACGTGGTTACGGATA
ACAATTACCGCCTCCGCGGG

Product: squalene-hopene cyclase-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKNPRLLLTAFLTCCMTAAPQNAAAQSPMRTSSSVPPQVELMYVKGLRYLQNAQKTDGTYDGTYGREPGIIGFCLMSVLA
HGDDPNAGPYATMVRRCVDYILSKQNKVSGYIGDSMYNHGFATLALAEAYGMVRDDRIGPALRKAVALTLTAQKKNKTGG
WRYSPESTDADSTVTGCQLVSLFAARNAGIPVPDEAFERGLKYMASCRDKKGAYGYTGPAGPRVTLTAIGSLTLSLARLK
TDPSFKDSLAYLKKHLNYRDSTYPFYFEYYMSQALFHADQEVWKEWNYKNMRYLGASQAPNGSWLSDHSAAYSTSAALLS
LALNYRFLPIYEQ

Sequences:

>Translated_333_residues
MKNPRLLLTAFLTCCMTAAPQNAAAQSPMRTSSSVPPQVELMYVKGLRYLQNAQKTDGTYDGTYGREPGIIGFCLMSVLA
HGDDPNAGPYATMVRRCVDYILSKQNKVSGYIGDSMYNHGFATLALAEAYGMVRDDRIGPALRKAVALTLTAQKKNKTGG
WRYSPESTDADSTVTGCQLVSLFAARNAGIPVPDEAFERGLKYMASCRDKKGAYGYTGPAGPRVTLTAIGSLTLSLARLK
TDPSFKDSLAYLKKHLNYRDSTYPFYFEYYMSQALFHADQEVWKEWNYKNMRYLGASQAPNGSWLSDHSAAYSTSAALLS
LALNYRFLPIYEQ
>Mature_333_residues
MKNPRLLLTAFLTCCMTAAPQNAAAQSPMRTSSSVPPQVELMYVKGLRYLQNAQKTDGTYDGTYGREPGIIGFCLMSVLA
HGDDPNAGPYATMVRRCVDYILSKQNKVSGYIGDSMYNHGFATLALAEAYGMVRDDRIGPALRKAVALTLTAQKKNKTGG
WRYSPESTDADSTVTGCQLVSLFAARNAGIPVPDEAFERGLKYMASCRDKKGAYGYTGPAGPRVTLTAIGSLTLSLARLK
TDPSFKDSLAYLKKHLNYRDSTYPFYFEYYMSQALFHADQEVWKEWNYKNMRYLGASQAPNGSWLSDHSAAYSTSAALLS
LALNYRFLPIYEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36790; Mature: 36790

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPRLLLTAFLTCCMTAAPQNAAAQSPMRTSSSVPPQVELMYVKGLRYLQNAQKTDGTY
CCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCC
DGTYGREPGIIGFCLMSVLAHGDDPNAGPYATMVRRCVDYILSKQNKVSGYIGDSMYNHG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCHHHCCC
FATLALAEAYGMVRDDRIGPALRKAVALTLTAQKKNKTGGWRYSPESTDADSTVTGCQLV
HHHHHHHHHHCCHHCCCCCHHHHHHHHHEEEECCCCCCCCEEECCCCCCCCCHHHHHHHH
SLFAARNAGIPVPDEAFERGLKYMASCRDKKGAYGYTGPAGPRVTLTAIGSLTLSLARLK
HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHC
TDPSFKDSLAYLKKHLNYRDSTYPFYFEYYMSQALFHADQEVWKEWNYKNMRYLGASQAP
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
NGSWLSDHSAAYSTSAALLSLALNYRFLPIYEQ
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MKNPRLLLTAFLTCCMTAAPQNAAAQSPMRTSSSVPPQVELMYVKGLRYLQNAQKTDGTY
CCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCC
DGTYGREPGIIGFCLMSVLAHGDDPNAGPYATMVRRCVDYILSKQNKVSGYIGDSMYNHG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCHHHCCC
FATLALAEAYGMVRDDRIGPALRKAVALTLTAQKKNKTGGWRYSPESTDADSTVTGCQLV
HHHHHHHHHHCCHHCCCCCHHHHHHHHHEEEECCCCCCCCEEECCCCCCCCCHHHHHHHH
SLFAARNAGIPVPDEAFERGLKYMASCRDKKGAYGYTGPAGPRVTLTAIGSLTLSLARLK
HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHC
TDPSFKDSLAYLKKHLNYRDSTYPFYFEYYMSQALFHADQEVWKEWNYKNMRYLGASQAP
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
NGSWLSDHSAAYSTSAALLSLALNYRFLPIYEQ
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA