Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736449

Identifier: 187736449

GI number: 187736449

Start: 2386121

End: 2386630

Strand: Reverse

Name: 187736449

Synonym: Amuc_1967

Alternate gene names: NA

Gene position: 2386630-2386121 (Counterclockwise)

Preceding gene: 187736451

Following gene: 187736448

Centisome position: 89.58

GC content: 55.49

Gene sequence:

>510_bases
ATGAAACAGGGCTTGTTCATATTGGTCTGCGGTTTGCTGGCGGCCGGCCTGACCGGGTGCGACGATTCCAGTGAACGGCG
CGCCCGTTATGCGGAAAAAAAGCCCGCTCCGCGCCCTCTGGAAAGGACGTTTGACCCTCCCAAAAAAGTCCTCCCTCCTT
CAAAACCTAAGAAAAAGGCCCCCGTATGGATGGATTACAAAGGTGAGGACATGCGGCAGCTTACGGAATTATCCGGCCGC
AAGGTGCTCCTTGTTTTTTACGCTTCGTGGAGCCGCCCGGCCATGGATTACGTCCAGGCGGTAAAATCTTATGCCGAATC
GCAGGACGGCAAGGCGTTTGCCGTGTTGATTGATGCGGATGCCTATCCGGACATAGCTCGCAAATATGGCCTGGAAGCCG
TCCCTCTGACGGTTCTGTATCTGGAAGGGATGAAGCTGAAGGATATGGTCGGCGGCATTACTGCGCCGCGCCTGAACGAA
CTGATTGAGCAGACGATACGGGTGCAATAG

Upstream 100 bases:

>100_bases
CAACCTTCACCATAACAGCAAGAAGGGGGAGGGGCAACGCGAAAAGCGGGATGGGTTTCAGGCTTGCAAATTCGCCTTCT
CCGGGCATACTTGCCTGCGG

Downstream 100 bases:

>100_bases
AAGGGATGGGCTGCGGCAGCCTCTGCGCGGTGCGGGGGGCGGTTGATCCCCTGTAAATGAACCTTTTGTTTGTTGTGCTT
TTTTTGCTCCGTACCTGTAA

Product: Thioredoxin domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKQGLFILVCGLLAAGLTGCDDSSERRARYAEKKPAPRPLERTFDPPKKVLPPSKPKKKAPVWMDYKGEDMRQLTELSGR
KVLLVFYASWSRPAMDYVQAVKSYAESQDGKAFAVLIDADAYPDIARKYGLEAVPLTVLYLEGMKLKDMVGGITAPRLNE
LIEQTIRVQ

Sequences:

>Translated_169_residues
MKQGLFILVCGLLAAGLTGCDDSSERRARYAEKKPAPRPLERTFDPPKKVLPPSKPKKKAPVWMDYKGEDMRQLTELSGR
KVLLVFYASWSRPAMDYVQAVKSYAESQDGKAFAVLIDADAYPDIARKYGLEAVPLTVLYLEGMKLKDMVGGITAPRLNE
LIEQTIRVQ
>Mature_169_residues
MKQGLFILVCGLLAAGLTGCDDSSERRARYAEKKPAPRPLERTFDPPKKVLPPSKPKKKAPVWMDYKGEDMRQLTELSGR
KVLLVFYASWSRPAMDYVQAVKSYAESQDGKAFAVLIDADAYPDIARKYGLEAVPLTVLYLEGMKLKDMVGGITAPRLNE
LIEQTIRVQ

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18907; Mature: 18907

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQGLFILVCGLLAAGLTGCDDSSERRARYAEKKPAPRPLERTFDPPKKVLPPSKPKKKA
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCHHCCCCCCCCCCC
PVWMDYKGEDMRQLTELSGRKVLLVFYASWSRPAMDYVQAVKSYAESQDGKAFAVLIDAD
CEEECCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
AYPDIARKYGLEAVPLTVLYLEGMKLKDMVGGITAPRLNELIEQTIRVQ
CCHHHHHHCCCCHHHHEEEEECCCCHHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQGLFILVCGLLAAGLTGCDDSSERRARYAEKKPAPRPLERTFDPPKKVLPPSKPKKKA
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCHHCCCCCCCCCCC
PVWMDYKGEDMRQLTELSGRKVLLVFYASWSRPAMDYVQAVKSYAESQDGKAFAVLIDAD
CEEECCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
AYPDIARKYGLEAVPLTVLYLEGMKLKDMVGGITAPRLNELIEQTIRVQ
CCHHHHHHCCCCHHHHEEEEECCCCHHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA