Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736435

Identifier: 187736435

GI number: 187736435

Start: 2370908

End: 2371399

Strand: Reverse

Name: 187736435

Synonym: Amuc_1953

Alternate gene names: NA

Gene position: 2371399-2370908 (Counterclockwise)

Preceding gene: 187736436

Following gene: 187736434

Centisome position: 89.01

GC content: 56.5

Gene sequence:

>492_bases
ATGAGAAGAAAAGACAGGGAAGTGACCCGGCACGGGGATTTGATGGAAATGGTCGCCCGGTTCAAGGTGTGCCGCCTGGG
ACTGTGGGACGGCAGGGAGGTGTATGTAGTTCCCCTCAACTTCGGATATGAAGAAAAAAATGGTTCCCTGAGCCTGTTTT
TCCACTGCGCCAGGGAAGGGAGGAAGCTGGATATCCTGCAAAACCGTCCGGAGGTTTCTTTTGAAATGGATGGGGATCAT
GTGTTGCTGGAGGGGGATGTCCCGTGCCGGTACAGTTACGCCTACGGCTGCGTCATGGGGCGTGGCGTCGTCGAATTTCT
CCGGGAGGATGAGGAAAAGATGCATGCCTTGCGCCGCATCATGCTACACCAGACGGGCAGGGATGCGGATTTTACCCCCG
GCATGGTCCGTTCCGTATGTGTTCTGCGTCTTAAGGTGGAGGCCGTCAGCGCCAAACTTCATGCGTGCCCGGAACCTCCT
CCTTCCCGTTGA

Upstream 100 bases:

>100_bases
CGGATATTTGCGGACTTCGGGCGGCTTCCGTACGGAATGGCTCCCTGCTGGCCGGACGTGCCGCCCTTTGCATGAATGAA
TGGATGGAGGGCGCCGGCTT

Downstream 100 bases:

>100_bases
TGGATTTTTTTATGACCGGAGAAATTGCGCCCCTGTTTGTCCGTTGGAGCCTGCCGCACTGGGCTGCCCTGGGCATCGTG
GCGCTGGCAGCAGGGGGGCT

Product: 5-nitroimidazole antibiotic resistance protein

Products: NA

Alternate protein names: Nitroimidazole Resistance Protein; Pyridoxamine 5-Phosphate Oxidase Family Protein; Antibiotic Resistance Protein; 5-Nitroimidazole Antibiotic Resistance; 5-Nitroimadazole Antibiotic Resistance Protein

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRRKDREVTRHGDLMEMVARFKVCRLGLWDGREVYVVPLNFGYEEKNGSLSLFFHCAREGRKLDILQNRPEVSFEMDGDH
VLLEGDVPCRYSYAYGCVMGRGVVEFLREDEEKMHALRRIMLHQTGRDADFTPGMVRSVCVLRLKVEAVSAKLHACPEPP
PSR

Sequences:

>Translated_163_residues
MRRKDREVTRHGDLMEMVARFKVCRLGLWDGREVYVVPLNFGYEEKNGSLSLFFHCAREGRKLDILQNRPEVSFEMDGDH
VLLEGDVPCRYSYAYGCVMGRGVVEFLREDEEKMHALRRIMLHQTGRDADFTPGMVRSVCVLRLKVEAVSAKLHACPEPP
PSR
>Mature_163_residues
MRRKDREVTRHGDLMEMVARFKVCRLGLWDGREVYVVPLNFGYEEKNGSLSLFFHCAREGRKLDILQNRPEVSFEMDGDH
VLLEGDVPCRYSYAYGCVMGRGVVEFLREDEEKMHALRRIMLHQTGRDADFTPGMVRSVCVLRLKVEAVSAKLHACPEPP
PSR

Specific function: Unknown

COG id: COG3467

COG function: function code R; Predicted flavin-nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18815; Mature: 18815

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRKDREVTRHGDLMEMVARFKVCRLGLWDGREVYVVPLNFGYEEKNGSLSLFFHCAREG
CCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEECCCCCEEEEEEECCCC
RKLDILQNRPEVSFEMDGDHVLLEGDVPCRYSYAYGCVMGRGVVEFLREDEEKMHALRRI
CEEEEECCCCCEEEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
MLHQTGRDADFTPGMVRSVCVLRLKVEAVSAKLHACPEPPPSR
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRRKDREVTRHGDLMEMVARFKVCRLGLWDGREVYVVPLNFGYEEKNGSLSLFFHCAREG
CCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEECCCCCEEEEEEECCCC
RKLDILQNRPEVSFEMDGDHVLLEGDVPCRYSYAYGCVMGRGVVEFLREDEEKMHALRRI
CEEEEECCCCCEEEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
MLHQTGRDADFTPGMVRSVCVLRLKVEAVSAKLHACPEPPPSR
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA