Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736402

Identifier: 187736402

GI number: 187736402

Start: 2331076

End: 2331825

Strand: Direct

Name: 187736402

Synonym: Amuc_1920

Alternate gene names: NA

Gene position: 2331076-2331825 (Clockwise)

Preceding gene: 187736401

Following gene: 187736404

Centisome position: 87.5

GC content: 60.27

Gene sequence:

>750_bases
ATGCTTTTTCTGCGCCTGCTTCCCCTGATATTGTGCTTTTCCGGCCTGGTTCACGCAGAACACCGCGTCTTCACCAGGAA
GGACGGATTTTTGTCCATGCGGGACAAGCTGAACGTGTATTTTTTCCGTTCTGATACGCACCGCCTGCTGGTAAGGGATG
AAGGGAGCGTCAAAACGCCCCGGTACGGCTCCCTGGACAAGGCCATGAGGAAAAGCCCCTGCGTGGCCGGAGTCAACGGA
GGATTCTTCAGCGCAGACGCGGGGGGAACTCCCCTGGGCCTGGTCGTCCAGGACGGCAAACGGCTTTCTCCGCTGGCCAC
GGGGTCCTTCGCTGTTTCCGGTGTCGTTTACGAAGGAGGCAGAGACGGATTAACCCTGGTCCGCAGTTCCGTGCTGAGGC
GCATGAGAAGACTGCCGGCCATGCAGGCGGCTATCCAAGGGGGGCCCTTTCTGGTGGAGAACGGCTCCGCCGTAAAAGGG
CTTAACGCGCAGAAGTCCACCTACCGCACCTTCATTGCCACGGACGGCGGCAGGAGGTGGTGCATCGGCGTTTCCTCCTC
CCTGACTCTGAAGGAGCTGGCAGCCTGGCTGGCGGCTCCCGGGGCATTGGGGAATTTCCGGGTGGAAACGGCCCTGAACC
TGGACGGCGGCTCTTCTTCCGCCTTCTGGTGCCATGAAACAGGCATTTCCTACCCTGCGTTCAAACAAGTCAGGAATTAT
CTGGGCGTAGCCCCCGTGGAACACCGGTAA

Upstream 100 bases:

>100_bases
GCCGCCTGCAAGGCTGCGTTGTCTGGCCGGGCGTATGCGTGCCTTCCGGCACTTGCGCGGAACGCCGGATTTTCTATTGT
TCCCCCACCGATTACTGACG

Downstream 100 bases:

>100_bases
ACTCCGTTCTCCACGGGGCCATGGACGCGTTTCCCTGCGCCTATCCTGCGCAGCAACAGAGCCGCGAACACCAGGAAACA
AACCAGGACGGCCCAGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLFLRLLPLILCFSGLVHAEHRVFTRKDGFLSMRDKLNVYFFRSDTHRLLVRDEGSVKTPRYGSLDKAMRKSPCVAGVNG
GFFSADAGGTPLGLVVQDGKRLSPLATGSFAVSGVVYEGGRDGLTLVRSSVLRRMRRLPAMQAAIQGGPFLVENGSAVKG
LNAQKSTYRTFIATDGGRRWCIGVSSSLTLKELAAWLAAPGALGNFRVETALNLDGGSSSAFWCHETGISYPAFKQVRNY
LGVAPVEHR

Sequences:

>Translated_249_residues
MLFLRLLPLILCFSGLVHAEHRVFTRKDGFLSMRDKLNVYFFRSDTHRLLVRDEGSVKTPRYGSLDKAMRKSPCVAGVNG
GFFSADAGGTPLGLVVQDGKRLSPLATGSFAVSGVVYEGGRDGLTLVRSSVLRRMRRLPAMQAAIQGGPFLVENGSAVKG
LNAQKSTYRTFIATDGGRRWCIGVSSSLTLKELAAWLAAPGALGNFRVETALNLDGGSSSAFWCHETGISYPAFKQVRNY
LGVAPVEHR
>Mature_249_residues
MLFLRLLPLILCFSGLVHAEHRVFTRKDGFLSMRDKLNVYFFRSDTHRLLVRDEGSVKTPRYGSLDKAMRKSPCVAGVNG
GFFSADAGGTPLGLVVQDGKRLSPLATGSFAVSGVVYEGGRDGLTLVRSSVLRRMRRLPAMQAAIQGGPFLVENGSAVKG
LNAQKSTYRTFIATDGGRRWCIGVSSSLTLKELAAWLAAPGALGNFRVETALNLDGGSSSAFWCHETGISYPAFKQVRNY
LGVAPVEHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26985; Mature: 26985

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLRLLPLILCFSGLVHAEHRVFTRKDGFLSMRDKLNVYFFRSDTHRLLVRDEGSVKTP
CHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCEEEEEEECCCEEEEEECCCCCCCC
RYGSLDKAMRKSPCVAGVNGGFFSADAGGTPLGLVVQDGKRLSPLATGSFAVSGVVYEGG
CCCCHHHHHHCCCCEEECCCCEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECC
RDGLTLVRSSVLRRMRRLPAMQAAIQGGPFLVENGSAVKGLNAQKSTYRTFIATDGGRRW
CCCHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCEECCCCCCCCEEEEEEEECCCCEE
CIGVSSSLTLKELAAWLAAPGALGNFRVETALNLDGGSSSAFWCHETGISYPAFKQVRNY
EEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHH
LGVAPVEHR
HCCCCCCCC
>Mature Secondary Structure
MLFLRLLPLILCFSGLVHAEHRVFTRKDGFLSMRDKLNVYFFRSDTHRLLVRDEGSVKTP
CHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCEEEEEEECCCEEEEEECCCCCCCC
RYGSLDKAMRKSPCVAGVNGGFFSADAGGTPLGLVVQDGKRLSPLATGSFAVSGVVYEGG
CCCCHHHHHHCCCCEEECCCCEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECC
RDGLTLVRSSVLRRMRRLPAMQAAIQGGPFLVENGSAVKGLNAQKSTYRTFIATDGGRRW
CCCHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCEECCCCCCCCEEEEEEEECCCCEE
CIGVSSSLTLKELAAWLAAPGALGNFRVETALNLDGGSSSAFWCHETGISYPAFKQVRNY
EEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHH
LGVAPVEHR
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA