Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736399
Identifier: 187736399
GI number: 187736399
Start: 2327545
End: 2328507
Strand: Direct
Name: 187736399
Synonym: Amuc_1917
Alternate gene names: NA
Gene position: 2327545-2328507 (Clockwise)
Preceding gene: 187736394
Following gene: 187736401
Centisome position: 87.37
GC content: 58.46
Gene sequence:
>963_bases ATGTCCCTGCCCCTTCTCGTTACCGGAACCATCGGAATTGATACCATCCTGACTCCCGGCGGCAGGGCGGACGGCGTTCT GGGAGGTTCCGTTTCCTTTGCGGCCGTGGCCGCCCTTTTGTTTGCCGACCGCGTGGATGCCGTCAGCATCATCGGAGAGG ATTTTCCCGCCCATTATGAAGCGGCCCTTGAGGCCAAAGGGGTGTGCATGAAAGGAGTAGAACGCAAGAAGGGGCCTTCT TTTGCCTGGACCGGGGAATATTTTGACAATATGAACAAGCGGAGAACCGTTTGTGCCAATGATGCCGTGATGCTGGAATG GAATGTGCACGTTCCGGAGCCTTTGAGGAACCATCCGGTGCTGGTTTGCTGCTGCATGGTTCCGGCCCAGCAGCTTAAGT GCATGGAACAATGTCCGGACGCGGCGCTGGTGCTTTCCGATTCCATGGACAAGTGGCTGCGCCGCCAGCCGGAATTACTG GATGCCGTGATCAGCCGTTCCCATATCACCATGATGAATGAGGATGAGGCGAAGGAATATGCCCAGGCGTCCACCGTCAT GGAAGCCGGGGAATTCCTGCTTTCCAAAGGCGCCGCATACGCAGTGGTGAAACAGGGGGAATACGGGGCCACTCTTCTGG GACGGGATGCCGGCGGGAATCTCCGGATTTTCCGTTGTCCCGCCTATCCCCTGAAAACGCTGGTGGACCCAACCGGCGCG GGGGATACGTTCCTGGGGGCTCTGGCCGGCTATTTGTCCACCCTGCCTCCCGGCCTTCCTCCGTTTGAGGAAGTGAAGAG GGGGATTGTGTACGGGACGGTGGCGGCCTCCTTCACCTGCGAGTCCTTTTCGGCAGACGCCCTTCTTTCCATGACAAAAG AGACCTTTCGCCGCCGTCTTGAAGAGTATGCGGAGATGTGCCGACTGCCAGACATCCGGCTCTCTTCCGCAAGTGCCTGT TAA
Upstream 100 bases:
>100_bases CTATTTCTTTTAAGCGTGTGCGGGTAAAATACCCTGTTTTTTCCATATCGCCAGCCTTTTTGTTCTTGATTGCAGGGTAA AACCGTATTTCCTTTTTTCC
Downstream 100 bases:
>100_bases GAAGGAATCAGACCTCCTGAAAAAGAGGGGATGCCGTCTTTGATGGTTCGTTTTCCGGTTTCCGTTTATGCGGACTGTCC GGAATTTCCAGGTAAAAAAG
Product: PfkB domain protein
Products: NA
Alternate protein names: Carbohydrate Kinase; Ribokinase-Like Domain-Containing Protein; PfkB Domain-Containing Protein; PfkB Family Carbohydrate Kinase; Carbohydrate Kinase PfkB Family Protein; Pfkb Domain Protein; Carbohydrate/Pyrimidine Kinase PfkB Family; Carbohydrate Kinase PfkB Family; Ribokinase Family Sugar Kinase; PfkB Family Protein; Ribokinase Family; Ribokinase-Like Protein; Sugar Kinases Ribokinase Family; ATP-Dependent Phosphofructokinase; Kinase Pfkb Family; Carbohydrate Kinase PfkB/Ribokinase Family; Ribokinase; PfkB Family Kinase; Carbohydrate/Purine Kinase; Kinase PfkB Family; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSLPLLVTGTIGIDTILTPGGRADGVLGGSVSFAAVAALLFADRVDAVSIIGEDFPAHYEAALEAKGVCMKGVERKKGPS FAWTGEYFDNMNKRRTVCANDAVMLEWNVHVPEPLRNHPVLVCCCMVPAQQLKCMEQCPDAALVLSDSMDKWLRRQPELL DAVISRSHITMMNEDEAKEYAQASTVMEAGEFLLSKGAAYAVVKQGEYGATLLGRDAGGNLRIFRCPAYPLKTLVDPTGA GDTFLGALAGYLSTLPPGLPPFEEVKRGIVYGTVAASFTCESFSADALLSMTKETFRRRLEEYAEMCRLPDIRLSSASAC
Sequences:
>Translated_320_residues MSLPLLVTGTIGIDTILTPGGRADGVLGGSVSFAAVAALLFADRVDAVSIIGEDFPAHYEAALEAKGVCMKGVERKKGPS FAWTGEYFDNMNKRRTVCANDAVMLEWNVHVPEPLRNHPVLVCCCMVPAQQLKCMEQCPDAALVLSDSMDKWLRRQPELL DAVISRSHITMMNEDEAKEYAQASTVMEAGEFLLSKGAAYAVVKQGEYGATLLGRDAGGNLRIFRCPAYPLKTLVDPTGA GDTFLGALAGYLSTLPPGLPPFEEVKRGIVYGTVAASFTCESFSADALLSMTKETFRRRLEEYAEMCRLPDIRLSSASAC >Mature_319_residues SLPLLVTGTIGIDTILTPGGRADGVLGGSVSFAAVAALLFADRVDAVSIIGEDFPAHYEAALEAKGVCMKGVERKKGPSF AWTGEYFDNMNKRRTVCANDAVMLEWNVHVPEPLRNHPVLVCCCMVPAQQLKCMEQCPDAALVLSDSMDKWLRRQPELLD AVISRSHITMMNEDEAKEYAQASTVMEAGEFLLSKGAAYAVVKQGEYGATLLGRDAGGNLRIFRCPAYPLKTLVDPTGAG DTFLGALAGYLSTLPPGLPPFEEVKRGIVYGTVAASFTCESFSADALLSMTKETFRRRLEEYAEMCRLPDIRLSSASAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34575; Mature: 34444
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPLLVTGTIGIDTILTPGGRADGVLGGSVSFAAVAALLFADRVDAVSIIGEDFPAHYE CCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AALEAKGVCMKGVERKKGPSFAWTGEYFDNMNKRRTVCANDAVMLEWNVHVPEPLRNHPV HHHHHCCHHHHCCHHCCCCCCEECCHHHHCCCCCCEEECCCEEEEEEECCCCCCCCCCCE LVCCCMVPAQQLKCMEQCPDAALVLSDSMDKWLRRQPELLDAVISRSHITMMNEDEAKEY EEEEECCCHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHCCCCEEECCCHHHHHH AQASTVMEAGEFLLSKGAAYAVVKQGEYGATLLGRDAGGNLRIFRCPAYPLKTLVDPTGA HHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCEEEEECCCCCHHHHCCCCCC GDTFLGALAGYLSTLPPGLPPFEEVKRGIVYGTVAASFTCESFSADALLSMTKETFRRRL CHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEEHHHHEECCCCCHHHHHHHHHHHHHHHH EEYAEMCRLPDIRLSSASAC HHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SLPLLVTGTIGIDTILTPGGRADGVLGGSVSFAAVAALLFADRVDAVSIIGEDFPAHYE CCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AALEAKGVCMKGVERKKGPSFAWTGEYFDNMNKRRTVCANDAVMLEWNVHVPEPLRNHPV HHHHHCCHHHHCCHHCCCCCCEECCHHHHCCCCCCEEECCCEEEEEEECCCCCCCCCCCE LVCCCMVPAQQLKCMEQCPDAALVLSDSMDKWLRRQPELLDAVISRSHITMMNEDEAKEY EEEEECCCHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHCCCCEEECCCHHHHHH AQASTVMEAGEFLLSKGAAYAVVKQGEYGATLLGRDAGGNLRIFRCPAYPLKTLVDPTGA HHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCEEEEECCCCCHHHHCCCCCC GDTFLGALAGYLSTLPPGLPPFEEVKRGIVYGTVAASFTCESFSADALLSMTKETFRRRL CHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEEHHHHEECCCCCHHHHHHHHHHHHHHHH EEYAEMCRLPDIRLSSASAC HHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA