Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736381

Identifier: 187736381

GI number: 187736381

Start: 2304940

End: 2305833

Strand: Direct

Name: 187736381

Synonym: Amuc_1898

Alternate gene names: NA

Gene position: 2304940-2305833 (Clockwise)

Preceding gene: 187736380

Following gene: 187736385

Centisome position: 86.52

GC content: 56.38

Gene sequence:

>894_bases
ATGGATTCCTCCCTCACATTTTACCTGGTTCTGGGCGCATTGCTGCTGGGTTTCATTGTACTCGGCATGCTGAAGGGGAT
GATTAAGATGCTCCTGTTCGGCGCGGCAGTGCTCTCTTCCGTAGCCGCTTACTTCTGGCTATCCAAATACGGTTTCACCT
ACCTCTCTTTCATCACCAGCGACCCGCGGGAATGGATGGTCACGGTGCTGTCCGTCGGAGGCGCGGCGGCTGTCTTCTTT
GTCTTTATGCACGGTCTCTTCTGGTTCAGCGACGTCTTCTCCTGGGGACGGCGCATGGGCTTCGGCGGGGCCAAGGGAAT
CGTCACGACGGTACTGATGGCGGCAGTCGTATGCTGGGTGGGAGTCATGTGCATCTTCTTTTACGGCTCCATGGCGGAAA
TGACCCGCGCCCGAGAACTGGCCCTGTACCACATGGACCCCAACCGCACCATTTCCTTACCTGCCATTTATTCCATCAAA
AAGTCCATCATGGACAACCCCCACCTGAGCTGGCTGGAAAAAATATCTCCGGAGCATGATCCGGAACGGCTTTCCCTGGC
AAAAATGATCGCCTACCTGGTGACGCTCAGTCCAGAGCTCTCCGACCAGCGGCGCACCCAGCTGGACTGCTATATGCCCC
GTTCCCGCATTACCAGCCGCGTGCTAAGCCTGAAAAGCCTGAGCGAAGACCCCGCCATCCGCCTTCTGGTGCAGAAGGGG
GATATGCAGGGCTTATATAATGATGTCAAGCTGACCCGCTTTCTGGAAGACCACGATGTCCGTTCCGTCCTGTCCCAACT
GGATGTTGATCGTGTGCTGGGCTTTGTCACGGAAATTCGTCGGACGGCCCCAGCCGGAAATGAATACATTCCCGAAGCCA
CGCCAATTGAGTGA

Upstream 100 bases:

>100_bases
GGAGGCCATGGCCTGGCTCTGCCTGTGCGACCACTACCTGCGCCAACGCTGCCAGAGGGCTCTGTAACAACCGGTTTCAC
GGCTTCTTTTCCCCTCATTC

Downstream 100 bases:

>100_bases
TAAGCGCGGATTTTTTGTTCCGCCGGAGTGGATTCGTTCCTTTTATCCGCCTTTAATTCAAGAAAAAATCAGGGAGTTAT
TCCCCCTTGCGCCCGAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MDSSLTFYLVLGALLLGFIVLGMLKGMIKMLLFGAAVLSSVAAYFWLSKYGFTYLSFITSDPREWMVTVLSVGGAAAVFF
VFMHGLFWFSDVFSWGRRMGFGGAKGIVTTVLMAAVVCWVGVMCIFFYGSMAEMTRARELALYHMDPNRTISLPAIYSIK
KSIMDNPHLSWLEKISPEHDPERLSLAKMIAYLVTLSPELSDQRRTQLDCYMPRSRITSRVLSLKSLSEDPAIRLLVQKG
DMQGLYNDVKLTRFLEDHDVRSVLSQLDVDRVLGFVTEIRRTAPAGNEYIPEATPIE

Sequences:

>Translated_297_residues
MDSSLTFYLVLGALLLGFIVLGMLKGMIKMLLFGAAVLSSVAAYFWLSKYGFTYLSFITSDPREWMVTVLSVGGAAAVFF
VFMHGLFWFSDVFSWGRRMGFGGAKGIVTTVLMAAVVCWVGVMCIFFYGSMAEMTRARELALYHMDPNRTISLPAIYSIK
KSIMDNPHLSWLEKISPEHDPERLSLAKMIAYLVTLSPELSDQRRTQLDCYMPRSRITSRVLSLKSLSEDPAIRLLVQKG
DMQGLYNDVKLTRFLEDHDVRSVLSQLDVDRVLGFVTEIRRTAPAGNEYIPEATPIE
>Mature_297_residues
MDSSLTFYLVLGALLLGFIVLGMLKGMIKMLLFGAAVLSSVAAYFWLSKYGFTYLSFITSDPREWMVTVLSVGGAAAVFF
VFMHGLFWFSDVFSWGRRMGFGGAKGIVTTVLMAAVVCWVGVMCIFFYGSMAEMTRARELALYHMDPNRTISLPAIYSIK
KSIMDNPHLSWLEKISPEHDPERLSLAKMIAYLVTLSPELSDQRRTQLDCYMPRSRITSRVLSLKSLSEDPAIRLLVQKG
DMQGLYNDVKLTRFLEDHDVRSVLSQLDVDRVLGFVTEIRRTAPAGNEYIPEATPIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33419; Mature: 33419

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSLTFYLVLGALLLGFIVLGMLKGMIKMLLFGAAVLSSVAAYFWLSKYGFTYLSFITS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPREWMVTVLSVGGAAAVFFVFMHGLFWFSDVFSWGRRMGFGGAKGIVTTVLMAAVVCWV
CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GVMCIFFYGSMAEMTRARELALYHMDPNRTISLPAIYSIKKSIMDNPHLSWLEKISPEHD
HHHHHHHHCCHHHHHHHHHHHEEEECCCCEECCHHHHHHHHHHCCCCCHHHHHHCCCCCC
PERLSLAKMIAYLVTLSPELSDQRRTQLDCYMPRSRITSRVLSLKSLSEDPAIRLLVQKG
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHEEEECCC
DMQGLYNDVKLTRFLEDHDVRSVLSQLDVDRVLGFVTEIRRTAPAGNEYIPEATPIE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDSSLTFYLVLGALLLGFIVLGMLKGMIKMLLFGAAVLSSVAAYFWLSKYGFTYLSFITS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPREWMVTVLSVGGAAAVFFVFMHGLFWFSDVFSWGRRMGFGGAKGIVTTVLMAAVVCWV
CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GVMCIFFYGSMAEMTRARELALYHMDPNRTISLPAIYSIKKSIMDNPHLSWLEKISPEHD
HHHHHHHHCCHHHHHHHHHHHEEEECCCCEECCHHHHHHHHHHCCCCCHHHHHHCCCCCC
PERLSLAKMIAYLVTLSPELSDQRRTQLDCYMPRSRITSRVLSLKSLSEDPAIRLLVQKG
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHEEEECCC
DMQGLYNDVKLTRFLEDHDVRSVLSQLDVDRVLGFVTEIRRTAPAGNEYIPEATPIE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA