Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yefI [C]
Identifier: 187736352
GI number: 187736352
Start: 2271629
End: 2272927
Strand: Reverse
Name: yefI [C]
Synonym: Amuc_1869
Alternate gene names: 187736352
Gene position: 2272927-2271629 (Counterclockwise)
Preceding gene: 187736354
Following gene: 187736351
Centisome position: 85.32
GC content: 54.89
Gene sequence:
>1299_bases ATGAGCACAATTCGAGTTCTTACATTAGGATGGGAATTCCCGCCCCTGGTCAACGGGGGGTTGGGCATTGCCTGCCTGGG TCTTTCCAAGGCGCTGGCAAAAAAAGTGGATTTAAGGGTGATCGTTCCCAAGGCCGACCCTTCCGTCCTTTTTGACGGAT TCCAGCTCACCGGTCTCAATAACGTCTCCTATCGGGAAGTGGAGCAAGTGGACCGGAAATATTCCTATGACAGCTTTGCC CTGGTGGAGCGCGCGCCCATTGAACTGGACCCCTACACCACCGTGGAAGGGGGATCCGGCGTGGTGCAGTTCACCAAGGA AGGCCGCATCACCTTCTCCAAAACGCATGAAGCCGACCTTCAGCTGTTCAGGAACAAGGAAGACCTTTACGCCGGAGACC TGGCCCTGAAAGTCATTCAATTCTCAAAAATAGCGGTAAAAGTCGCCCTTCAGCAGGATTTTGACATTATCCACGCCCAT GACTGGATGACCTATCTGGCTGGCGTGGAAGTGAAAAAAGCCACGGGCAAGCCCCTGGTGGTGCATCTGCACGCTTCCCA GTTTGACCGTGCCGGAGCGGATGCCCGCGGCTGGATTTACGACATTGAAAAATTCGGCATGGAACAGGCGGATGCCGTTA TCCCGGTCAGTAAATACACGGGAACCATCGCCAGCGGGCACTATGCCATCGACCCCCATAAGATATTTCCCATTCACAAC GGAGCGGATCCGGTCAAAGTCTTCAAAGGGAAGAAAAAATTCCCGGAAAAACTCGTCCTCTTCCTGGGCCGCCTGACGGC TCAGAAAGGCCCGGGATTCTTCCTTCAGATTGCCGCCAAGGTTCTGGAACAGACGGACGACGTACGCTTCGTCATGGCCG GTACGGGAGAAAAGCTCCGCCAGTTGATCGAATCCGGAGCCTTCAAGGGCGTGGGCGACAAATTCCACTTCACCGGCTTC CTGAACAAGGACAAAGTCAATGAACTCCTCTCCATCACGGACATCTACTGCATGCCTTCCGTATCGGAGCCCTTCGGCCT TTCTGCGCTGGAGGCGGCCCAATTCAACATTCCCGCCGTGATTTCCAAGCAGTCCGGCGTGGCGGAAGTCATGAAGGGAG CCCTGAAAGCGGATTTCTGGGACGTCAACAAGATGGCGGAACATATCGTCCATCTCTGCACGGATGAGGAATTGTACCGG AAAGTAGTGGAACAGAGCACGGAGGACATCAAGGCCTCCACCTGGGATGCCGCCGCAGACAAGGTTATCCGGGTCTATGA ACATGTGCTGAACCGCTAA
Upstream 100 bases:
>100_bases ATTAATCTAGACCGAACATGAAAAATCTGGTTTTATTGCGTTGGTGTACAACACGGCACGAGTCCGTATCCTTCCCGGCA CCGACAAACCACATCAACCG
Downstream 100 bases:
>100_bases AAACGCCTTTTTACCCTACTCCATAACTCTCAGCCTTCTTCACCCCGTCCATGAGCAACATTTCCCTCACTTTCGTTGCG CATCAGCCCAACCGGCTGAT
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MSTIRVLTLGWEFPPLVNGGLGIACLGLSKALAKKVDLRVIVPKADPSVLFDGFQLTGLNNVSYREVEQVDRKYSYDSFA LVERAPIELDPYTTVEGGSGVVQFTKEGRITFSKTHEADLQLFRNKEDLYAGDLALKVIQFSKIAVKVALQQDFDIIHAH DWMTYLAGVEVKKATGKPLVVHLHASQFDRAGADARGWIYDIEKFGMEQADAVIPVSKYTGTIASGHYAIDPHKIFPIHN GADPVKVFKGKKKFPEKLVLFLGRLTAQKGPGFFLQIAAKVLEQTDDVRFVMAGTGEKLRQLIESGAFKGVGDKFHFTGF LNKDKVNELLSITDIYCMPSVSEPFGLSALEAAQFNIPAVISKQSGVAEVMKGALKADFWDVNKMAEHIVHLCTDEELYR KVVEQSTEDIKASTWDAAADKVIRVYEHVLNR
Sequences:
>Translated_432_residues MSTIRVLTLGWEFPPLVNGGLGIACLGLSKALAKKVDLRVIVPKADPSVLFDGFQLTGLNNVSYREVEQVDRKYSYDSFA LVERAPIELDPYTTVEGGSGVVQFTKEGRITFSKTHEADLQLFRNKEDLYAGDLALKVIQFSKIAVKVALQQDFDIIHAH DWMTYLAGVEVKKATGKPLVVHLHASQFDRAGADARGWIYDIEKFGMEQADAVIPVSKYTGTIASGHYAIDPHKIFPIHN GADPVKVFKGKKKFPEKLVLFLGRLTAQKGPGFFLQIAAKVLEQTDDVRFVMAGTGEKLRQLIESGAFKGVGDKFHFTGF LNKDKVNELLSITDIYCMPSVSEPFGLSALEAAQFNIPAVISKQSGVAEVMKGALKADFWDVNKMAEHIVHLCTDEELYR KVVEQSTEDIKASTWDAAADKVIRVYEHVLNR >Mature_431_residues STIRVLTLGWEFPPLVNGGLGIACLGLSKALAKKVDLRVIVPKADPSVLFDGFQLTGLNNVSYREVEQVDRKYSYDSFAL VERAPIELDPYTTVEGGSGVVQFTKEGRITFSKTHEADLQLFRNKEDLYAGDLALKVIQFSKIAVKVALQQDFDIIHAHD WMTYLAGVEVKKATGKPLVVHLHASQFDRAGADARGWIYDIEKFGMEQADAVIPVSKYTGTIASGHYAIDPHKIFPIHNG ADPVKVFKGKKKFPEKLVLFLGRLTAQKGPGFFLQIAAKVLEQTDDVRFVMAGTGEKLRQLIESGAFKGVGDKFHFTGFL NKDKVNELLSITDIYCMPSVSEPFGLSALEAAQFNIPAVISKQSGVAEVMKGALKADFWDVNKMAEHIVHLCTDEELYRK VVEQSTEDIKASTWDAAADKVIRVYEHVLNR
Specific function: May Be A Glycosyltransferase Involved In The Transfer Of UDP-Galf And UDP-Glucose. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17532709, Length=233, Percent_Identity=29.1845493562232, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI9755344, Length=243, Percent_Identity=25.1028806584362, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 47869; Mature: 47737
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIRVLTLGWEFPPLVNGGLGIACLGLSKALAKKVDLRVIVPKADPSVLFDGFQLTGLN CCCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHCCEEEEEECCCCCEEECCEEEECCC NVSYREVEQVDRKYSYDSFALVERAPIELDPYTTVEGGSGVVQFTKEGRITFSKTHEADL CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCEEEEECCCCEEEECCCHHHH QLFRNKEDLYAGDLALKVIQFSKIAVKVALQQDFDIIHAHDWMTYLAGVEVKKATGKPLV HHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEHHHHHHHHHCCEEEECCCCCEE VHLHASQFDRAGADARGWIYDIEKFGMEQADAVIPVSKYTGTIASGHYAIDPHKIFPIHN EEEECCCCCCCCCCCCCCEEEHHHCCCCCCCEEEEEHHCCCCEECCEEEECCCEEEEECC GADPVKVFKGKKKFPEKLVLFLGRLTAQKGPGFFLQIAAKVLEQTDDVRFVMAGTGEKLR CCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHH QLIESGAFKGVGDKFHFTGFLNKDKVNELLSITDIYCMPSVSEPFGLSALEAAQFNIPAV HHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCCCCEE ISKQSGVAEVMKGALKADFWDVNKMAEHIVHLCTDEELYRKVVEQSTEDIKASTWDAAAD EECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCCHHHHH KVIRVYEHVLNR HHHHHHHHHHCC >Mature Secondary Structure STIRVLTLGWEFPPLVNGGLGIACLGLSKALAKKVDLRVIVPKADPSVLFDGFQLTGLN CCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHCCEEEEEECCCCCEEECCEEEECCC NVSYREVEQVDRKYSYDSFALVERAPIELDPYTTVEGGSGVVQFTKEGRITFSKTHEADL CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCEEEEECCCCEEEECCCHHHH QLFRNKEDLYAGDLALKVIQFSKIAVKVALQQDFDIIHAHDWMTYLAGVEVKKATGKPLV HHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEHHHHHHHHHCCEEEECCCCCEE VHLHASQFDRAGADARGWIYDIEKFGMEQADAVIPVSKYTGTIASGHYAIDPHKIFPIHN EEEECCCCCCCCCCCCCCEEEHHHCCCCCCCEEEEEHHCCCCEECCEEEECCCEEEEECC GADPVKVFKGKKKFPEKLVLFLGRLTAQKGPGFFLQIAAKVLEQTDDVRFVMAGTGEKLR CCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHH QLIESGAFKGVGDKFHFTGFLNKDKVNELLSITDIYCMPSVSEPFGLSALEAAQFNIPAV HHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCCCCEE ISKQSGVAEVMKGALKADFWDVNKMAEHIVHLCTDEELYRKVVEQSTEDIKASTWDAAAD EECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCCHHHHH KVIRVYEHVLNR HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]