Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yefI [C]

Identifier: 187736352

GI number: 187736352

Start: 2271629

End: 2272927

Strand: Reverse

Name: yefI [C]

Synonym: Amuc_1869

Alternate gene names: 187736352

Gene position: 2272927-2271629 (Counterclockwise)

Preceding gene: 187736354

Following gene: 187736351

Centisome position: 85.32

GC content: 54.89

Gene sequence:

>1299_bases
ATGAGCACAATTCGAGTTCTTACATTAGGATGGGAATTCCCGCCCCTGGTCAACGGGGGGTTGGGCATTGCCTGCCTGGG
TCTTTCCAAGGCGCTGGCAAAAAAAGTGGATTTAAGGGTGATCGTTCCCAAGGCCGACCCTTCCGTCCTTTTTGACGGAT
TCCAGCTCACCGGTCTCAATAACGTCTCCTATCGGGAAGTGGAGCAAGTGGACCGGAAATATTCCTATGACAGCTTTGCC
CTGGTGGAGCGCGCGCCCATTGAACTGGACCCCTACACCACCGTGGAAGGGGGATCCGGCGTGGTGCAGTTCACCAAGGA
AGGCCGCATCACCTTCTCCAAAACGCATGAAGCCGACCTTCAGCTGTTCAGGAACAAGGAAGACCTTTACGCCGGAGACC
TGGCCCTGAAAGTCATTCAATTCTCAAAAATAGCGGTAAAAGTCGCCCTTCAGCAGGATTTTGACATTATCCACGCCCAT
GACTGGATGACCTATCTGGCTGGCGTGGAAGTGAAAAAAGCCACGGGCAAGCCCCTGGTGGTGCATCTGCACGCTTCCCA
GTTTGACCGTGCCGGAGCGGATGCCCGCGGCTGGATTTACGACATTGAAAAATTCGGCATGGAACAGGCGGATGCCGTTA
TCCCGGTCAGTAAATACACGGGAACCATCGCCAGCGGGCACTATGCCATCGACCCCCATAAGATATTTCCCATTCACAAC
GGAGCGGATCCGGTCAAAGTCTTCAAAGGGAAGAAAAAATTCCCGGAAAAACTCGTCCTCTTCCTGGGCCGCCTGACGGC
TCAGAAAGGCCCGGGATTCTTCCTTCAGATTGCCGCCAAGGTTCTGGAACAGACGGACGACGTACGCTTCGTCATGGCCG
GTACGGGAGAAAAGCTCCGCCAGTTGATCGAATCCGGAGCCTTCAAGGGCGTGGGCGACAAATTCCACTTCACCGGCTTC
CTGAACAAGGACAAAGTCAATGAACTCCTCTCCATCACGGACATCTACTGCATGCCTTCCGTATCGGAGCCCTTCGGCCT
TTCTGCGCTGGAGGCGGCCCAATTCAACATTCCCGCCGTGATTTCCAAGCAGTCCGGCGTGGCGGAAGTCATGAAGGGAG
CCCTGAAAGCGGATTTCTGGGACGTCAACAAGATGGCGGAACATATCGTCCATCTCTGCACGGATGAGGAATTGTACCGG
AAAGTAGTGGAACAGAGCACGGAGGACATCAAGGCCTCCACCTGGGATGCCGCCGCAGACAAGGTTATCCGGGTCTATGA
ACATGTGCTGAACCGCTAA

Upstream 100 bases:

>100_bases
ATTAATCTAGACCGAACATGAAAAATCTGGTTTTATTGCGTTGGTGTACAACACGGCACGAGTCCGTATCCTTCCCGGCA
CCGACAAACCACATCAACCG

Downstream 100 bases:

>100_bases
AAACGCCTTTTTACCCTACTCCATAACTCTCAGCCTTCTTCACCCCGTCCATGAGCAACATTTCCCTCACTTTCGTTGCG
CATCAGCCCAACCGGCTGAT

Product: glycosyl transferase group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MSTIRVLTLGWEFPPLVNGGLGIACLGLSKALAKKVDLRVIVPKADPSVLFDGFQLTGLNNVSYREVEQVDRKYSYDSFA
LVERAPIELDPYTTVEGGSGVVQFTKEGRITFSKTHEADLQLFRNKEDLYAGDLALKVIQFSKIAVKVALQQDFDIIHAH
DWMTYLAGVEVKKATGKPLVVHLHASQFDRAGADARGWIYDIEKFGMEQADAVIPVSKYTGTIASGHYAIDPHKIFPIHN
GADPVKVFKGKKKFPEKLVLFLGRLTAQKGPGFFLQIAAKVLEQTDDVRFVMAGTGEKLRQLIESGAFKGVGDKFHFTGF
LNKDKVNELLSITDIYCMPSVSEPFGLSALEAAQFNIPAVISKQSGVAEVMKGALKADFWDVNKMAEHIVHLCTDEELYR
KVVEQSTEDIKASTWDAAADKVIRVYEHVLNR

Sequences:

>Translated_432_residues
MSTIRVLTLGWEFPPLVNGGLGIACLGLSKALAKKVDLRVIVPKADPSVLFDGFQLTGLNNVSYREVEQVDRKYSYDSFA
LVERAPIELDPYTTVEGGSGVVQFTKEGRITFSKTHEADLQLFRNKEDLYAGDLALKVIQFSKIAVKVALQQDFDIIHAH
DWMTYLAGVEVKKATGKPLVVHLHASQFDRAGADARGWIYDIEKFGMEQADAVIPVSKYTGTIASGHYAIDPHKIFPIHN
GADPVKVFKGKKKFPEKLVLFLGRLTAQKGPGFFLQIAAKVLEQTDDVRFVMAGTGEKLRQLIESGAFKGVGDKFHFTGF
LNKDKVNELLSITDIYCMPSVSEPFGLSALEAAQFNIPAVISKQSGVAEVMKGALKADFWDVNKMAEHIVHLCTDEELYR
KVVEQSTEDIKASTWDAAADKVIRVYEHVLNR
>Mature_431_residues
STIRVLTLGWEFPPLVNGGLGIACLGLSKALAKKVDLRVIVPKADPSVLFDGFQLTGLNNVSYREVEQVDRKYSYDSFAL
VERAPIELDPYTTVEGGSGVVQFTKEGRITFSKTHEADLQLFRNKEDLYAGDLALKVIQFSKIAVKVALQQDFDIIHAHD
WMTYLAGVEVKKATGKPLVVHLHASQFDRAGADARGWIYDIEKFGMEQADAVIPVSKYTGTIASGHYAIDPHKIFPIHNG
ADPVKVFKGKKKFPEKLVLFLGRLTAQKGPGFFLQIAAKVLEQTDDVRFVMAGTGEKLRQLIESGAFKGVGDKFHFTGFL
NKDKVNELLSITDIYCMPSVSEPFGLSALEAAQFNIPAVISKQSGVAEVMKGALKADFWDVNKMAEHIVHLCTDEELYRK
VVEQSTEDIKASTWDAAADKVIRVYEHVLNR

Specific function: May Be A Glycosyltransferase Involved In The Transfer Of UDP-Galf And UDP-Glucose. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=233, Percent_Identity=29.1845493562232, Blast_Score=72, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI9755344, Length=243, Percent_Identity=25.1028806584362, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 47869; Mature: 47737

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIRVLTLGWEFPPLVNGGLGIACLGLSKALAKKVDLRVIVPKADPSVLFDGFQLTGLN
CCCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHCCEEEEEECCCCCEEECCEEEECCC
NVSYREVEQVDRKYSYDSFALVERAPIELDPYTTVEGGSGVVQFTKEGRITFSKTHEADL
CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCEEEEECCCCEEEECCCHHHH
QLFRNKEDLYAGDLALKVIQFSKIAVKVALQQDFDIIHAHDWMTYLAGVEVKKATGKPLV
HHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEHHHHHHHHHCCEEEECCCCCEE
VHLHASQFDRAGADARGWIYDIEKFGMEQADAVIPVSKYTGTIASGHYAIDPHKIFPIHN
EEEECCCCCCCCCCCCCCEEEHHHCCCCCCCEEEEEHHCCCCEECCEEEECCCEEEEECC
GADPVKVFKGKKKFPEKLVLFLGRLTAQKGPGFFLQIAAKVLEQTDDVRFVMAGTGEKLR
CCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHH
QLIESGAFKGVGDKFHFTGFLNKDKVNELLSITDIYCMPSVSEPFGLSALEAAQFNIPAV
HHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCCCCEE
ISKQSGVAEVMKGALKADFWDVNKMAEHIVHLCTDEELYRKVVEQSTEDIKASTWDAAAD
EECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCCHHHHH
KVIRVYEHVLNR
HHHHHHHHHHCC
>Mature Secondary Structure 
STIRVLTLGWEFPPLVNGGLGIACLGLSKALAKKVDLRVIVPKADPSVLFDGFQLTGLN
CCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHCCEEEEEECCCCCEEECCEEEECCC
NVSYREVEQVDRKYSYDSFALVERAPIELDPYTTVEGGSGVVQFTKEGRITFSKTHEADL
CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCEEEEECCCCEEEECCCHHHH
QLFRNKEDLYAGDLALKVIQFSKIAVKVALQQDFDIIHAHDWMTYLAGVEVKKATGKPLV
HHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEHHHHHHHHHCCEEEECCCCCEE
VHLHASQFDRAGADARGWIYDIEKFGMEQADAVIPVSKYTGTIASGHYAIDPHKIFPIHN
EEEECCCCCCCCCCCCCCEEEHHHCCCCCCCEEEEEHHCCCCEECCEEEECCCEEEEECC
GADPVKVFKGKKKFPEKLVLFLGRLTAQKGPGFFLQIAAKVLEQTDDVRFVMAGTGEKLR
CCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHH
QLIESGAFKGVGDKFHFTGFLNKDKVNELLSITDIYCMPSVSEPFGLSALEAAQFNIPAV
HHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCCCCEE
ISKQSGVAEVMKGALKADFWDVNKMAEHIVHLCTDEELYRKVVEQSTEDIKASTWDAAAD
EECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCCHHHHH
KVIRVYEHVLNR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]