Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736295
Identifier: 187736295
GI number: 187736295
Start: 2195019
End: 2196032
Strand: Direct
Name: 187736295
Synonym: Amuc_1808
Alternate gene names: NA
Gene position: 2195019-2196032 (Clockwise)
Preceding gene: 187736294
Following gene: 187736296
Centisome position: 82.39
GC content: 49.21
Gene sequence:
>1014_bases ATGAGGCTGGTTATAATCATCGGAGTTGTCCTGTCTGTATGGTTTGCGGATTGGGCGGCGGCACAGCAGATTGTGGATGT GCATTGCCATAACATTATGTCTGGCTATATGGAAGTGTTGAAAAAACATGATGCCGCTTTGGAAGAGACTTTTCCGTTGC CGGAATGGAATGTGGATGCCCATCTTGCCTTTATGGAAAAAGCCGGAATCGGTTGTTCTGTATTGTCGATGCCCGCACCG CAACCCTACTTCGGTGATACTGGGGAGTGCCGTCGCATAATCCGGGAATATAACGAGTATTGCGCCGCTCTGAAAAAGAA ATATCCGGGCAAGTTCAAATTTTGCGCTGCACTGCCATTGCCTGACGTGAACGCTGCCATAGATGAGGCTGTTTATGCTC TCGATACGCTCGGTGCAGACGGCATCAAGCTGGCCACGAACAGTCGGGGACAGTATATCGGGGATGAAGCCCTCGACCCG TTGATGGAGGTATTGCACAAGCGGAATGCCGTCGTCATCATTCATCCGCACAAGCCTAATCCGGTTAATGATACCATTAT TTCTACCGCCCCGCTTGCAGTCTATGAATATCCGGCCGAAACGACACGTGCCGTCGTCAATATGATTTCCCGCAACGTGT TGGTGCGCTATCCGAATCTCAAGGTGGTCGTTCCCCATTGCGGCTCGTTCCTGCCTATGGCGATTCCACGCATGAAGGCT ATACACCCGGCTATGCAGGCAAAGGGATTTATGGGTTCAATTGACTGGGATGGCAATCTATCCCATTTGTACTATGATCT TGCCGGGGGAGCGAGTCCTGAAATCGTGAAGATGATGCTGACGGTCGCTCCGCCAGAGCATATACTTTATGGTTCGGATT ATCCTTATATGTCTGACGGTGTGTTGTTTGGAAATCTGCAACGGATGCGTGAACAGTTTGCTGCGGATAAGGAACTGTCA CCCTATTTGGAACAGTTTTTTTCGGAAAATGCCCGTAATTTATTTAACAAATAA
Upstream 100 bases:
>100_bases TGCAGGTCGTGCTGACTGTTGACGAAGTGAAGATGTTGGAGGATGCGGCCGAAAGCACGGGGGTAGATACGAGAGGTTCA TGGGAAAATCCGATGATATG
Downstream 100 bases:
>100_bases TATTTGAAAACGGAGAGCATACTTTTCGGTAGGATAAGATAACCTGTGAAGAGATTGCTACAGCCGTTACTTTTTTGATA AGCGACGAAGCCATATTTGT
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidohydrolase; Metal-Dependent Hydrolase; 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; Amidohydrolase Family; 5-Carboxyvanillate Decarboxylase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; Twin-Arginine Translocation Pathway Signal; Amidohydrolase/Decarboxylase; Amidohydrolase 2 Family Protein; Decarboxylase; Amidohydrolase Family Protein; Hydrolase; 2-Amino-3-Carboxymuconate 6-Semialdehyde Decarboxylase
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MRLVIIIGVVLSVWFADWAAAQQIVDVHCHNIMSGYMEVLKKHDAALEETFPLPEWNVDAHLAFMEKAGIGCSVLSMPAP QPYFGDTGECRRIIREYNEYCAALKKKYPGKFKFCAALPLPDVNAAIDEAVYALDTLGADGIKLATNSRGQYIGDEALDP LMEVLHKRNAVVIIHPHKPNPVNDTIISTAPLAVYEYPAETTRAVVNMISRNVLVRYPNLKVVVPHCGSFLPMAIPRMKA IHPAMQAKGFMGSIDWDGNLSHLYYDLAGGASPEIVKMMLTVAPPEHILYGSDYPYMSDGVLFGNLQRMREQFAADKELS PYLEQFFSENARNLFNK
Sequences:
>Translated_337_residues MRLVIIIGVVLSVWFADWAAAQQIVDVHCHNIMSGYMEVLKKHDAALEETFPLPEWNVDAHLAFMEKAGIGCSVLSMPAP QPYFGDTGECRRIIREYNEYCAALKKKYPGKFKFCAALPLPDVNAAIDEAVYALDTLGADGIKLATNSRGQYIGDEALDP LMEVLHKRNAVVIIHPHKPNPVNDTIISTAPLAVYEYPAETTRAVVNMISRNVLVRYPNLKVVVPHCGSFLPMAIPRMKA IHPAMQAKGFMGSIDWDGNLSHLYYDLAGGASPEIVKMMLTVAPPEHILYGSDYPYMSDGVLFGNLQRMREQFAADKELS PYLEQFFSENARNLFNK >Mature_337_residues MRLVIIIGVVLSVWFADWAAAQQIVDVHCHNIMSGYMEVLKKHDAALEETFPLPEWNVDAHLAFMEKAGIGCSVLSMPAP QPYFGDTGECRRIIREYNEYCAALKKKYPGKFKFCAALPLPDVNAAIDEAVYALDTLGADGIKLATNSRGQYIGDEALDP LMEVLHKRNAVVIIHPHKPNPVNDTIISTAPLAVYEYPAETTRAVVNMISRNVLVRYPNLKVVVPHCGSFLPMAIPRMKA IHPAMQAKGFMGSIDWDGNLSHLYYDLAGGASPEIVKMMLTVAPPEHILYGSDYPYMSDGVLFGNLQRMREQFAADKELS PYLEQFFSENARNLFNK
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI109715856, Length=269, Percent_Identity=22.6765799256506, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71995651, Length=273, Percent_Identity=20.8791208791209, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37563; Mature: 37563
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVIIIGVVLSVWFADWAAAQQIVDVHCHNIMSGYMEVLKKHDAALEETFPLPEWNVDA CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH HLAFMEKAGIGCSVLSMPAPQPYFGDTGECRRIIREYNEYCAALKKKYPGKFKFCAALPL HHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC PDVNAAIDEAVYALDTLGADGIKLATNSRGQYIGDEALDPLMEVLHKRNAVVIIHPHKPN CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC PVNDTIISTAPLAVYEYPAETTRAVVNMISRNVLVRYPNLKVVVPHCGSFLPMAIPRMKA CCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCEEEECCCCEEECCCCCCHHHHHHHHHHH IHPAMQAKGFMGSIDWDGNLSHLYYDLAGGASPEIVKMMLTVAPPEHILYGSDYPYMSDG HHHHHHHCCCEECCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCHHHEEECCCCCCCCCC VLFGNLQRMREQFAADKELSPYLEQFFSENARNLFNK EEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLVIIIGVVLSVWFADWAAAQQIVDVHCHNIMSGYMEVLKKHDAALEETFPLPEWNVDA CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH HLAFMEKAGIGCSVLSMPAPQPYFGDTGECRRIIREYNEYCAALKKKYPGKFKFCAALPL HHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC PDVNAAIDEAVYALDTLGADGIKLATNSRGQYIGDEALDPLMEVLHKRNAVVIIHPHKPN CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC PVNDTIISTAPLAVYEYPAETTRAVVNMISRNVLVRYPNLKVVVPHCGSFLPMAIPRMKA CCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCEEEECCCCEEECCCCCCHHHHHHHHHHH IHPAMQAKGFMGSIDWDGNLSHLYYDLAGGASPEIVKMMLTVAPPEHILYGSDYPYMSDG HHHHHHHCCCEECCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCHHHEEECCCCCCCCCC VLFGNLQRMREQFAADKELSPYLEQFFSENARNLFNK EEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA