Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736273
Identifier: 187736273
GI number: 187736273
Start: 2173448
End: 2174284
Strand: Direct
Name: 187736273
Synonym: Amuc_1786
Alternate gene names: NA
Gene position: 2173448-2174284 (Clockwise)
Preceding gene: 187736262
Following gene: 187736274
Centisome position: 81.58
GC content: 56.63
Gene sequence:
>837_bases ATGCAGTCTGACACGGTAGAATGTAAGCCGACCATGTGGTTTACCGGCAGGGCGGTTATCATGGCTCTCATGTTTCTGGG GTTCGGAGTGTATTTTTATTATGATGCTTCCACCGGATACCCTCAAAAAAACCTGGAGTTTTTCATGCACAAGGCGTTCG TGGACGCTGGAGCCGTGTTTGACCGTGAGGTGAGCGGGAAAGGGGCGTCCGCGGAGGACTGGGAGCGCATTGTTCTGGCG CGCACTGTGGATTTTCCGGAGGGCTATGAAATTCCTTCCGGCGTGAATCGGAACGCGGTGCCGTGGCCTGACATTTTGGC GGATTACAGTCTGATGTCCACCCCCGGCAAGGGCTGGAGCGCTGCGTGGCAATCTTATTCCGGGGAAAAGCGCTATCCCA TCAAGCCGGTGGACCACCCGTATGACGCCTCCAAAATTTTTGAACAGTGGGTGGCCGGGTGCATTTGCCTGGCGCTTGCC ATGGTGGCTCTGTTTTTCCTGGTGAGAACGCGCGGCAGGAAAATGTCCCTGAACGGGAAAGAGGTGACGGCCGCCGGGGT GGTTTTCCGCGTGGATGACATTGCCCGTCTGGATTTGCGCAGATGGAAACTGAAGGGACTGGCCATAGCGACGCTGAAAC CGGAATGCGGAGGAGCCCGAATCAGGCTGGACGGCCTGACTTACGGCGGCTTCCGGAAGGAGGATTCTCCCCATAACGCG GAAGATTTCATGAAGGCTCTTCTGTCTCTCTACAGAGGAGAAATAGTGGATTATGAAGAAATTCCTGATGCCGGCGGGCC GCCTGCCCGGCAGGAGGACGAGGAACGTGCCGTATGA
Upstream 100 bases:
>100_bases GATATCCGGGGGGCGACAGGACGCTCCGCTTTCCCGCAAAGGAGGGGGAGGTGCGCTTTTTTTATGGTCAAGGGCATGGA TTTGCTGGTATGTAGGAAGC
Downstream 100 bases:
>100_bases GCGAATCCCTTCCACCGGAAAAGGGCGCCAATGACCGTGCGTTCGGCGTCGCCTGCTGGACGCTGGGTGGGCTGGCGTTT GTTCTGTTGCTGATGGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MQSDTVECKPTMWFTGRAVIMALMFLGFGVYFYYDASTGYPQKNLEFFMHKAFVDAGAVFDREVSGKGASAEDWERIVLA RTVDFPEGYEIPSGVNRNAVPWPDILADYSLMSTPGKGWSAAWQSYSGEKRYPIKPVDHPYDASKIFEQWVAGCICLALA MVALFFLVRTRGRKMSLNGKEVTAAGVVFRVDDIARLDLRRWKLKGLAIATLKPECGGARIRLDGLTYGGFRKEDSPHNA EDFMKALLSLYRGEIVDYEEIPDAGGPPARQEDEERAV
Sequences:
>Translated_278_residues MQSDTVECKPTMWFTGRAVIMALMFLGFGVYFYYDASTGYPQKNLEFFMHKAFVDAGAVFDREVSGKGASAEDWERIVLA RTVDFPEGYEIPSGVNRNAVPWPDILADYSLMSTPGKGWSAAWQSYSGEKRYPIKPVDHPYDASKIFEQWVAGCICLALA MVALFFLVRTRGRKMSLNGKEVTAAGVVFRVDDIARLDLRRWKLKGLAIATLKPECGGARIRLDGLTYGGFRKEDSPHNA EDFMKALLSLYRGEIVDYEEIPDAGGPPARQEDEERAV >Mature_278_residues MQSDTVECKPTMWFTGRAVIMALMFLGFGVYFYYDASTGYPQKNLEFFMHKAFVDAGAVFDREVSGKGASAEDWERIVLA RTVDFPEGYEIPSGVNRNAVPWPDILADYSLMSTPGKGWSAAWQSYSGEKRYPIKPVDHPYDASKIFEQWVAGCICLALA MVALFFLVRTRGRKMSLNGKEVTAAGVVFRVDDIARLDLRRWKLKGLAIATLKPECGGARIRLDGLTYGGFRKEDSPHNA EDFMKALLSLYRGEIVDYEEIPDAGGPPARQEDEERAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31125; Mature: 31125
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSDTVECKPTMWFTGRAVIMALMFLGFGVYFYYDASTGYPQKNLEFFMHKAFVDAGAVF CCCCCEECCCCEEECHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCHHH DREVSGKGASAEDWERIVLARTVDFPEGYEIPSGVNRNAVPWPDILADYSLMSTPGKGWS CCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCHH AAWQSYSGEKRYPIKPVDHPYDASKIFEQWVAGCICLALAMVALFFLVRTRGRKMSLNGK HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC EVTAAGVVFRVDDIARLDLRRWKLKGLAIATLKPECGGARIRLDGLTYGGFRKEDSPHNA EEEEEEEEEEECHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCEEECCCCCCCCCCCH EDFMKALLSLYRGEIVDYEEIPDAGGPPARQEDEERAV HHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MQSDTVECKPTMWFTGRAVIMALMFLGFGVYFYYDASTGYPQKNLEFFMHKAFVDAGAVF CCCCCEECCCCEEECHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCHHH DREVSGKGASAEDWERIVLARTVDFPEGYEIPSGVNRNAVPWPDILADYSLMSTPGKGWS CCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCHH AAWQSYSGEKRYPIKPVDHPYDASKIFEQWVAGCICLALAMVALFFLVRTRGRKMSLNGK HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC EVTAAGVVFRVDDIARLDLRRWKLKGLAIATLKPECGGARIRLDGLTYGGFRKEDSPHNA EEEEEEEEEEECHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCEEECCCCCCCCCCCH EDFMKALLSLYRGEIVDYEEIPDAGGPPARQEDEERAV HHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA