Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736222
Identifier: 187736222
GI number: 187736222
Start: 2117252
End: 2117488
Strand: Direct
Name: 187736222
Synonym: Amuc_1735
Alternate gene names: NA
Gene position: 2117252-2117488 (Clockwise)
Preceding gene: 187736221
Following gene: 187736225
Centisome position: 79.47
GC content: 51.05
Gene sequence:
>237_bases ATGTCCATTATCTGCTGGTGCATCCCTAGGTACCAGGGATGCGGTGTCGGTTCGTGGTTGCTGGGTATGTGCAAAAGACG CTATGCCGGGTATTTGCGCATAGTTCTCACTTCCTGCAGGGAAAAGGTTCCTTTTTACGAAAGGAATGGTTTCTTTCCGG ACCGGACGCAGGAGGCTGTGCGTTTGATTCCTCCTACGTTCGGAGAAACCGGGATTGAACAGGAAGAAGGAGAGTAA
Upstream 100 bases:
>100_bases GCGAAGGCATTGCGCCATTACGGGGCAGTGTTCTCCGCTTGGGATGGGAGCAGACTGGCGGGGCTGGTAGCCGCCATGGA TGACGGAACCATGACGGCTT
Downstream 100 bases:
>100_bases TATCTCAATTTTTCTGGGAAATCCGCTTGCGGAAGGGCTGCATGCGGCACATGGTGGCGGTGCGCCAGAGCCATTCCAAG GGGCCGTACAGGAAATGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSIICWCIPRYQGCGVGSWLLGMCKRRYAGYLRIVLTSCREKVPFYERNGFFPDRTQEAVRLIPPTFGETGIEQEEGE
Sequences:
>Translated_78_residues MSIICWCIPRYQGCGVGSWLLGMCKRRYAGYLRIVLTSCREKVPFYERNGFFPDRTQEAVRLIPPTFGETGIEQEEGE >Mature_77_residues SIICWCIPRYQGCGVGSWLLGMCKRRYAGYLRIVLTSCREKVPFYERNGFFPDRTQEAVRLIPPTFGETGIEQEEGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9011; Mature: 8879
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIICWCIPRYQGCGVGSWLLGMCKRRYAGYLRIVLTSCREKVPFYERNGFFPDRTQEAV CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH RLIPPTFGETGIEQEEGE HHCCCCCCCCCCCCCCCC >Mature Secondary Structure SIICWCIPRYQGCGVGSWLLGMCKRRYAGYLRIVLTSCREKVPFYERNGFFPDRTQEAV CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH RLIPPTFGETGIEQEEGE HHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA