Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736195
Identifier: 187736195
GI number: 187736195
Start: 2075033
End: 2075440
Strand: Direct
Name: 187736195
Synonym: Amuc_1708
Alternate gene names: NA
Gene position: 2075033-2075440 (Clockwise)
Preceding gene: 187736193
Following gene: 187736196
Centisome position: 77.89
GC content: 48.53
Gene sequence:
>408_bases ATGAGAGAGATACAAATACAGTTTTCCAAGCCCGGTAACTGGAGGGAATTCACACTAACAGCCATCTACCAGGATTCGGA TGGATATACCCGCATAGACCGCTATAAACAGAATGATATACCGTCCGGGCAGGCCCCGGCTTTGAGCGCGGCTGTAGCCG TCATTGCAGACATGGAAGAGGACTGGCAAGCCGTCCAGGTATGGGCAAGGCTGGGAAATACCTCTGTTCTCAATAATTCC GCAGAAGACGATGAGGCCGTTGAGTTTCGTGAAGCAGTTCTACTGACGATTGAGGCTGTCAATAGCCTCGGGGGCCGCCG TATTTTTACCCCCGGTAATTATGCGCAGTTCATACTGATGGATTTTGCCTCCATATCGTTTTTCAAGTATTTTACCATCA GAAAATAA
Upstream 100 bases:
>100_bases CTCCAACAAGACGGGACAAGCCCGGCAGGTGTGGGTGTTTGCCAGCCATCACGATGCTCGCGCCGCCATTATTAAATCAG CCAATTAGCATAATGATACC
Downstream 100 bases:
>100_bases TAAGGATATCAGCAAATAAGATTGTTGGACTGACTGCATGATTGCGGCAGACTGGGGGATATGTGATGCAGTGTTTTTTC CGGACAAGGCGTTTCCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MREIQIQFSKPGNWREFTLTAIYQDSDGYTRIDRYKQNDIPSGQAPALSAAVAVIADMEEDWQAVQVWARLGNTSVLNNS AEDDEAVEFREAVLLTIEAVNSLGGRRIFTPGNYAQFILMDFASISFFKYFTIRK
Sequences:
>Translated_135_residues MREIQIQFSKPGNWREFTLTAIYQDSDGYTRIDRYKQNDIPSGQAPALSAAVAVIADMEEDWQAVQVWARLGNTSVLNNS AEDDEAVEFREAVLLTIEAVNSLGGRRIFTPGNYAQFILMDFASISFFKYFTIRK >Mature_135_residues MREIQIQFSKPGNWREFTLTAIYQDSDGYTRIDRYKQNDIPSGQAPALSAAVAVIADMEEDWQAVQVWARLGNTSVLNNS AEDDEAVEFREAVLLTIEAVNSLGGRRIFTPGNYAQFILMDFASISFFKYFTIRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15339; Mature: 15339
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREIQIQFSKPGNWREFTLTAIYQDSDGYTRIDRYKQNDIPSGQAPALSAAVAVIADMEE CCEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCH DWQAVQVWARLGNTSVLNNSAEDDEAVEFREAVLLTIEAVNSLGGRRIFTPGNYAQFILM HHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHH DFASISFFKYFTIRK HHHHHHHEEEEEECC >Mature Secondary Structure MREIQIQFSKPGNWREFTLTAIYQDSDGYTRIDRYKQNDIPSGQAPALSAAVAVIADMEE CCEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCH DWQAVQVWARLGNTSVLNNSAEDDEAVEFREAVLLTIEAVNSLGGRRIFTPGNYAQFILM HHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHH DFASISFFKYFTIRK HHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA