Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is mtaD [H]
Identifier: 187736175
GI number: 187736175
Start: 2051564
End: 2052886
Strand: Direct
Name: mtaD [H]
Synonym: Amuc_1688
Alternate gene names: 187736175
Gene position: 2051564-2052886 (Clockwise)
Preceding gene: 187736173
Following gene: 187736176
Centisome position: 77.01
GC content: 60.54
Gene sequence:
>1323_bases ATGGAACAACAAGCGTGTGATTTGCTGGTGACCGCTTCCCGCATGCTGGGCGGAGCGGAACAGTCCGTTGCTCCCGGGGA TGCGGCCGTCGCCGTCCGGGACGGGAAAATTCTGGAAACGGGAAGCGCCGCAGAACTGGAGGCCAGGTGGAGGCCCGCCG TCCGCAGGAATTTGGGGAATGTGCTGCTGATGCCGGGGCTTATTAATGCCCATACGCATGTCCCCATGACCTTTTTGCGC GGTTTTGCGGATGACTTGCCGCTGATGGAATGGCTGACCGGACATATTTTCCCAGTGGAAGCCCGGCTGACGGATAAAAT CGTCTCCCTGGGGGCCCGGCTGGGCATGTATGAAATGATGCGGACGGGCACCACGGCATTTGTAGATTCCTACCTGTTGG AAGCCAACGTTCTCCAGGAGGCGGAACGCATGGGAATGCGCTGTGTGGGCGGAGAGGTTGTTTTTGCCTTTCCCTCTCCG GCGTACGGCGGGTGGGACGGTGCGGAAGCCCTGTACCGGGAGCAGGCGGAGCGCTTTTCCGGCCGCGGCAGGGTACAGGT GGCCCTGATGCCGCACAGCGTGTACACCACCAGTGACGAAGTGCTCCGGCGTTCCATGAAGCTGGCGGAGGAACTGGACC TGATGCTGCATATCCATTTGTCCGAATCCGCCGGGGAAGTGGAGCAGTGCCGTTCCCTGCACGGGGGCAGGCGTCCCGTA GGCTATGCCCGTGATATGGGGCTGCTGAATGAACGCTCCGTGCTGGCCCATATGGTGGACGTGACGGATGAGGAACTGGA ACTGGTGGCCGCTTCCGGAGCGGCGGTTGTCCATAACCCGGTCAGCAACCTGAAACTGGCATCCGGCTTCGCCCGCGTGC GGGATATGGTGCGGGCCGGCGTTCCCGTCTCTCTGGGAACGGACGGAGCGTGCAGCAACAACAGTCTGGACATGTTTGAA ACAATGAAGCTGGCCGCTATTCTTGCCAAGGGGTACAGCGGGGACGCTACCGCGGTCCCCGCCATGCAGGCGTTGAAGAT GGCGACGGAGGAGGGCGCCCGCATTTTCCGGACGCCGGGGCTGGGAACACTGGTTCCGGGGGCTCCCGCGGATATGATCG CCCTGAACCTGGATGAACCGAACCTGTGCCCGATTTTCAACGAAACGTCCCATGCCGTTTATGCCTCTTCCGGCAAGGAT TGCGTGTTCACCATGGTGGAAGGGAGAATTTTGTATGATCATGGAATTTACACGGACGGCCTGTATGCGGATACCGCCGC GGAAATGCGGGATCTGGTAAAGTGGGTGAAGAATAGTGATTGA
Upstream 100 bases:
>100_bases TCTCTTTTGAAGTCAAACATGAAATGTCAAATGGATGCGAAATCCCCGAGCCGAGGAGATGAAGTTGCCAGAACCCTCCC GCTGGGGTACATTCTGCGCC
Downstream 100 bases:
>100_bases GTATTGAGGATGAGCGAATAAAGGCAGGTTCTCAACACATGCTTTAATCTCTGGGTCCTTACCTCTGCTATCTGTCGGCC TCCCGAACCGGCGCATGCTC
Product: amidohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MEQQACDLLVTASRMLGGAEQSVAPGDAAVAVRDGKILETGSAAELEARWRPAVRRNLGNVLLMPGLINAHTHVPMTFLR GFADDLPLMEWLTGHIFPVEARLTDKIVSLGARLGMYEMMRTGTTAFVDSYLLEANVLQEAERMGMRCVGGEVVFAFPSP AYGGWDGAEALYREQAERFSGRGRVQVALMPHSVYTTSDEVLRRSMKLAEELDLMLHIHLSESAGEVEQCRSLHGGRRPV GYARDMGLLNERSVLAHMVDVTDEELELVAASGAAVVHNPVSNLKLASGFARVRDMVRAGVPVSLGTDGACSNNSLDMFE TMKLAAILAKGYSGDATAVPAMQALKMATEEGARIFRTPGLGTLVPGAPADMIALNLDEPNLCPIFNETSHAVYASSGKD CVFTMVEGRILYDHGIYTDGLYADTAAEMRDLVKWVKNSD
Sequences:
>Translated_440_residues MEQQACDLLVTASRMLGGAEQSVAPGDAAVAVRDGKILETGSAAELEARWRPAVRRNLGNVLLMPGLINAHTHVPMTFLR GFADDLPLMEWLTGHIFPVEARLTDKIVSLGARLGMYEMMRTGTTAFVDSYLLEANVLQEAERMGMRCVGGEVVFAFPSP AYGGWDGAEALYREQAERFSGRGRVQVALMPHSVYTTSDEVLRRSMKLAEELDLMLHIHLSESAGEVEQCRSLHGGRRPV GYARDMGLLNERSVLAHMVDVTDEELELVAASGAAVVHNPVSNLKLASGFARVRDMVRAGVPVSLGTDGACSNNSLDMFE TMKLAAILAKGYSGDATAVPAMQALKMATEEGARIFRTPGLGTLVPGAPADMIALNLDEPNLCPIFNETSHAVYASSGKD CVFTMVEGRILYDHGIYTDGLYADTAAEMRDLVKWVKNSD >Mature_440_residues MEQQACDLLVTASRMLGGAEQSVAPGDAAVAVRDGKILETGSAAELEARWRPAVRRNLGNVLLMPGLINAHTHVPMTFLR GFADDLPLMEWLTGHIFPVEARLTDKIVSLGARLGMYEMMRTGTTAFVDSYLLEANVLQEAERMGMRCVGGEVVFAFPSP AYGGWDGAEALYREQAERFSGRGRVQVALMPHSVYTTSDEVLRRSMKLAEELDLMLHIHLSESAGEVEQCRSLHGGRRPV GYARDMGLLNERSVLAHMVDVTDEELELVAASGAAVVHNPVSNLKLASGFARVRDMVRAGVPVSLGTDGACSNNSLDMFE TMKLAAILAKGYSGDATAVPAMQALKMATEEGARIFRTPGLGTLVPGAPADMIALNLDEPNLCPIFNETSHAVYASSGKD CVFTMVEGRILYDHGIYTDGLYADTAAEMRDLVKWVKNSD
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=378, Percent_Identity=28.5714285714286, Blast_Score=114, Evalue=1e-25, Organism=Escherichia coli, GI1789249, Length=375, Percent_Identity=28, Blast_Score=123, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17540282, Length=360, Percent_Identity=25.2777777777778, Blast_Score=78, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6319963, Length=345, Percent_Identity=25.7971014492754, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI24643849, Length=417, Percent_Identity=27.8177458033573, Blast_Score=130, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 47596; Mature: 47596
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQQACDLLVTASRMLGGAEQSVAPGDAAVAVRDGKILETGSAAELEARWRPAVRRNLGN CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEECCCCCHHHHHCCHHHHHCCCC VLLMPGLINAHTHVPMTFLRGFADDLPLMEWLTGHIFPVEARLTDKIVSLGARLGMYEMM EEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHH RTGTTAFVDSYLLEANVLQEAERMGMRCVGGEVVFAFPSPAYGGWDGAEALYREQAERFS HCCCHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHC GRGRVQVALMPHSVYTTSDEVLRRSMKLAEELDLMLHIHLSESAGEVEQCRSLHGGRRPV CCCEEEEEEECCCEECCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCCCCC GYARDMGLLNERSVLAHMVDVTDEELELVAASGAAVVHNPVSNLKLASGFARVRDMVRAG CHHHHCCCCCHHHHHHHHHHCCCCHHHEEEECCCEEEECCHHHHHHHHHHHHHHHHHHCC VPVSLGTDGACSNNSLDMFETMKLAAILAKGYSGDATAVPAMQALKMATEEGARIFRTPG CCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC LGTLVPGAPADMIALNLDEPNLCPIFNETSHAVYASSGKDCVFTMVEGRILYDHGIYTDG CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCEEEEECCCCCCC LYADTAAEMRDLVKWVKNSD CCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEQQACDLLVTASRMLGGAEQSVAPGDAAVAVRDGKILETGSAAELEARWRPAVRRNLGN CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEECCCCCHHHHHCCHHHHHCCCC VLLMPGLINAHTHVPMTFLRGFADDLPLMEWLTGHIFPVEARLTDKIVSLGARLGMYEMM EEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHH RTGTTAFVDSYLLEANVLQEAERMGMRCVGGEVVFAFPSPAYGGWDGAEALYREQAERFS HCCCHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHC GRGRVQVALMPHSVYTTSDEVLRRSMKLAEELDLMLHIHLSESAGEVEQCRSLHGGRRPV CCCEEEEEEECCCEECCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCCCCC GYARDMGLLNERSVLAHMVDVTDEELELVAASGAAVVHNPVSNLKLASGFARVRDMVRAG CHHHHCCCCCHHHHHHHHHHCCCCHHHEEEECCCEEEECCHHHHHHHHHHHHHHHHHHCC VPVSLGTDGACSNNSLDMFETMKLAAILAKGYSGDATAVPAMQALKMATEEGARIFRTPG CCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC LGTLVPGAPADMIALNLDEPNLCPIFNETSHAVYASSGKDCVFTMVEGRILYDHGIYTDG CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCEEEEECCCCCCC LYADTAAEMRDLVKWVKNSD CCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA