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The map label for this gene is dpnC [H]

Identifier: 187736054

GI number: 187736054

Start: 1882455

End: 1883225

Strand: Reverse

Name: dpnC [H]

Synonym: Amuc_1564

Alternate gene names: 187736054

Gene position: 1883225-1882455 (Counterclockwise)

Preceding gene: 187736055

Following gene: 187736053

Centisome position: 70.69

GC content: 34.89

Gene sequence:

>771_bases
ATGGACTTATTTTTCAATAATAATGTGACTGAAGGCTACAAAAACCATAGCCAAATAGCAAGAAGACTAACCGAAGATTG
GGTAGAACGCAATATGTTTTGCCCTATTTGTGGACACTCTGTATTGAATCATTACCAAAACAACAAACCTGTTGCCGACT
TCTATTGTTGTTGCTGCCATTCGGACTTTGAACTAAAAAGTCTTAAAAGTTCCAATAAAATATTAAGCAAAAAGATAAAT
GATGGAGCCTATGACACGATGATTAGCCGGATAAAATCATATAACAATCCAAACTTCTTTTTTATGAACTATGCAGATGG
AGCGGTAAACAACCTTTGGCTAATTCCTAACCATTTCTTTATTCCTGCTATTATTGAAAAACGTCCTCCTCTCTCAGCAA
ATGCAAAAAGAGCGGGATGGACAGGCTGCAATATCCTTTTGAGTGAAATACCAGAAAGTGGAAAAATACAAATCATCAAA
AACTCTATTGTAATTGAGAAAGAAGAAATTCTTGCAAAATACAAACGTACAAAATCACTCTTAACAAAAAACCTTGATAG
TCGAGGATGGCTTATGGATGTTCTTGCCTGCGTTGAAAGACTCCCCAACAAAGACTTTACACTTAATGAAATGTATTTAT
TTACTGAAGAACTTCAAGCAAAACATCCTGTAAATACTTTCATTCAACCTAAGATACGTCAACAACTACAGCGTTTACGC
GACAAAGGGTATATAGAATTCTTAGATAGAGGACACTATCGAAAATTGTAA

Upstream 100 bases:

>100_bases
ATTACAAAATATCATAATTTAATTTTTGTTATTAAAAAATCATTAGTTAAATTATGTTATAGAAGATAATTTCGTATCTT
TACAGCCAAAATTCTGAACT

Downstream 100 bases:

>100_bases
GCATAATTAACCTTTTCGTAGAACAAATAAGAAACGCCTTGAGTCACTCAAAAACAGAGTAAAGAGAGTCAGAATAACGA
GTTCTTCCAAATGCTCCGGA

Product: Type II site-specific deoxyribonuclease

Products: NA

Alternate protein names: R.DpnI; Endonuclease DpnI; Type II restriction enzyme DpnI [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MDLFFNNNVTEGYKNHSQIARRLTEDWVERNMFCPICGHSVLNHYQNNKPVADFYCCCCHSDFELKSLKSSNKILSKKIN
DGAYDTMISRIKSYNNPNFFFMNYADGAVNNLWLIPNHFFIPAIIEKRPPLSANAKRAGWTGCNILLSEIPESGKIQIIK
NSIVIEKEEILAKYKRTKSLLTKNLDSRGWLMDVLACVERLPNKDFTLNEMYLFTEELQAKHPVNTFIQPKIRQQLQRLR
DKGYIEFLDRGHYRKL

Sequences:

>Translated_256_residues
MDLFFNNNVTEGYKNHSQIARRLTEDWVERNMFCPICGHSVLNHYQNNKPVADFYCCCCHSDFELKSLKSSNKILSKKIN
DGAYDTMISRIKSYNNPNFFFMNYADGAVNNLWLIPNHFFIPAIIEKRPPLSANAKRAGWTGCNILLSEIPESGKIQIIK
NSIVIEKEEILAKYKRTKSLLTKNLDSRGWLMDVLACVERLPNKDFTLNEMYLFTEELQAKHPVNTFIQPKIRQQLQRLR
DKGYIEFLDRGHYRKL
>Mature_256_residues
MDLFFNNNVTEGYKNHSQIARRLTEDWVERNMFCPICGHSVLNHYQNNKPVADFYCCCCHSDFELKSLKSSNKILSKKIN
DGAYDTMISRIKSYNNPNFFFMNYADGAVNNLWLIPNHFFIPAIIEKRPPLSANAKRAGWTGCNILLSEIPESGKIQIIK
NSIVIEKEEILAKYKRTKSLLTKNLDSRGWLMDVLACVERLPNKDFTLNEMYLFTEELQAKHPVNTFIQPKIRQQLQRLR
DKGYIEFLDRGHYRKL

Specific function: Recognizes the double-stranded and methylated sequence G(Me)ATC and cleaves after A-2 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010324 [H]

Pfam domain/function: PF06044 DRP [H]

EC number: =3.1.21.4 [H]

Molecular weight: Translated: 29921; Mature: 29921

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLFFNNNVTEGYKNHSQIARRLTEDWVERNMFCPICGHSVLNHYQNNKPVADFYCCCCH
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHCC
SDFELKSLKSSNKILSKKINDGAYDTMISRIKSYNNPNFFFMNYADGAVNNLWLIPNHFF
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCC
IPAIIEKRPPLSANAKRAGWTGCNILLSEIPESGKIQIIKNSIVIEKEEILAKYKRTKSL
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCEEECHHHHHHHHHHHHHH
LTKNLDSRGWLMDVLACVERLPNKDFTLNEMYLFTEELQAKHPVNTFIQPKIRQQLQRLR
HHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHH
DKGYIEFLDRGHYRKL
HCCHHHHHCCCCCCCC
>Mature Secondary Structure
MDLFFNNNVTEGYKNHSQIARRLTEDWVERNMFCPICGHSVLNHYQNNKPVADFYCCCCH
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHCC
SDFELKSLKSSNKILSKKINDGAYDTMISRIKSYNNPNFFFMNYADGAVNNLWLIPNHFF
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCC
IPAIIEKRPPLSANAKRAGWTGCNILLSEIPESGKIQIIKNSIVIEKEEILAKYKRTKSL
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCEEECHHHHHHHHHHHHHH
LTKNLDSRGWLMDVLACVERLPNKDFTLNEMYLFTEELQAKHPVNTFIQPKIRQQLQRLR
HHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHH
DKGYIEFLDRGHYRKL
HCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2844782; 3019562; 11463916 [H]