Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736052
Identifier: 187736052
GI number: 187736052
Start: 1878236
End: 1881109
Strand: Reverse
Name: 187736052
Synonym: Amuc_1562
Alternate gene names: NA
Gene position: 1881109-1878236 (Counterclockwise)
Preceding gene: 187736053
Following gene: 187736051
Centisome position: 70.61
GC content: 60.13
Gene sequence:
>2874_bases ATGAACCGATTCTTTCTATCCTGGGACAAACCGGCCTGCCGTGCTGTAGCGGAACGCCTGCTTTCCCTGGGAAATGGCTT CCACCGGCATCTGGTGCTGGTTCCCACACGGGAATCCGGAAGGCAGCTGAGGGAATACCTTGCCTCCATTTCCCGTACAC AGGCCATCTTTGCTCCCCAAGTCATTCCGGCAGACCAGTTCCCCCGGATGGAAGAAAAGGAAGAAACGGCGTCCGCTCCG GAAGAACTGGCCGGGTGGCTCCTGGCCCTGGGGAAAACGCCTCACCGCCTTTATCCCCGCCTGTTTCCACGCACCATGCC GGAGGATTTTTCCAGCATGCTGGAAATGGCCGGCAGCCTGCAAAACCTGAGGCACGCCATGGCGAACCAGGGCGTCTCCT GCATCATGGCCCACCATGCCTGTGCGGGCAGAGACGAACGCTGGAAGGACATGGAAAGGCTGGAGGGACAATGCACGCAA CAACTGGAAAGCTGGAAGCTTGAAGACAGGACCGCCATGAAGGCGGAAGCCCCGCCCCGGCTGCTGAATTCCCTGAGGGA AACAGGTGGAAACATTATTCTGGCCTGCACAGCGGAGGTGCCGCCCCCCCTGCGCCATGCCCTCCAGCATGCGGAAAGAA ATGGCGTACCCGTCCAGATATGGATACATGCGCCGGAAGAAGAAGCCGCCTCCTTTGATTCCTGGGGATGCCCTCTGCCG GAAGAGTGGTCCCGGCGCCCCATCCCAATCCGCGACGGTCAAATCAGAATTGCGGCCAACCCGGCGCGGCTGGCTGAAGA AACGTGCCGCATCATCGCCCGCACAGCGGAAGGAGGAACGCCGGACATCGCCCTGGGCGTTTGCGATCCTGACATGAACG TCGCCCTGGACGCAGCTCTGCGCCAATACGGCTGGGGCCTCCACAATCCGGAAGGGAAGCCTTTTGCCGGAAGCGGCGTC ATGGACCTGCTCCGCAACCTTCGGCGGGCGCTGGAAGAAAAGGGGACGGCGCGCCCCGTCTATTCCCTGGCGCGCTCCTC CCTGCTCTGCGCCTCCCTGGGAATAAAAGGCCAGCAGGGTTGCTGCGCCGCGCTGGACAAAATCCAGCAGAAATTCCTTC CGGAAACGGAAGAATACCTGCTTTCCAGGCTGAAAGAGGCTTATCCCGGCGCCTTTCCTTCCATCCAGGCCATTCTGGAA TGGCGGAACCGGATGGCGGAACCGGGAATGCTGGGGGAACGGCTGATGGAATGGTTCCCGGCTTTGGCAACCATCTATGG CCCGGAGACGGAAGCCATGGAAATGTTCCATTCCTGCCTTTCCGGGCTCATGCGTCTGCAACAGCGCTCCACCGCGTTTT CCAGCCCGGAGACGGCTCTCCTGCTCCTGATGAAATGCCTCCAGCCGCTGCGTGTCAGAAACAGGAGAAAAGCTCATGCG GCGCTGGATTCCCTGGGCTGGATGGAAGTTCACTTCCGCCCGGAAAGAAACCTCATTCTCACGGGACTAAACGAAGGGAC CGTACCGGAAGGAGGCGTTTCCGACCAGTTTATGCCGGAGGAACTGCGGGAAACCCTGGGCATTGATTCCTTTAACCGGA AAAAAGCCCGGGACAGTTTTCTGCTGACCGCCCTGCTCCATTCCCGCGAACGGGAAGGCAGTCTCACCATCCTTCTCTCC CGGACCAGCAGCAGGAACGATCCTCTGACCCCTTCCTCCCTGCTCATGCGCTGCCCGGAGGCGGAGCTGCCGCACCGCGT AGAACGGCTTTTCCAGGAAATCAGCGATGTGCCCGCTCCCCTGCCCTACCAGCGCGGAAACTGGCATCTTCAACCCGCGG AAGGCTGGAAGACCGCTGCGGACATCGGCGCGATGGCGCCCGGCTACAAAAACCCGTGGAAGGAAAAAGGGCTGGCCTTC TCCCCCTCCGTCCTCAAAAGGTTCCTGGCCTGCCCCATGCGCTTCTGGATGCGGGAGGCGCTGCACATGAATGAGGAAGA ATTCCTGCCGGACAAAGAGGACATGGCCGTCAACGAGCTGGGCACCATGCTGCACGACGTGCTGGAATGTTTCTGCCGGG AACACGCCGTCCTGAAAGACGGCATGAACGCAGCCTCCTTTCAGAACGCTATCACGGAAATACTGGAACAAACCTTCCGG AAACAATACGGCCCCTCCCCCCTCATGCCCCTGCTGCTGCAAAAACGCTCCATGGAACAGAGGCTTTCCGTTTACGCCGT TCAGCATTTGCAGGCCCTTCAGGAAGGATGGTCCTGCATTGCCTTTGAGCACCAGGTAGAAAACTGGATACTGGGCGGCT TCCCCATGAAATTCCGCATTGACCGCATTGACCGCCATGCGGACGGGCACATACGGGTCATTGACTACAAAACGGGAGCG GCCTCCTCCTGTGAAAAAAAGCATCTGGACCCGCTCGGACGGCCGGACGCCCTGCCCCTGCTTTCCCCAGCCCTGCATCC CTACACCAAACGCCTGAAAAACGGGAAACTGGCGCACGCGCGCTGGAAAGACCTGCAGCTACCCGTTTATGTGCTGTGGG CCTCGGAAACCTACGGGGGCCATCCCTCTGCGGCTTATTACGCCCTTCCCGCCAATCCCATGGACATCGGAATCTCCTCC TGGGACACCCTCCACGACACCATGCCCGGGTATGAGGAATGCGCGCTGGACAGCGCCTGTTCCTGGACGGTGGAGCTGAT GAAACTTCTTCATGAAGGACGCGGTCTCATCACTGCGGAGGAACTGGGCTGGACACCGCCCTCTTATGACGTATTCAAGG ACCTGATGACTTCCCGGAGGGAAAGCCTGCAGGATCTGCTGGGCCTCCGCCTCACCCCCCACCTTCCTTTTTAA
Upstream 100 bases:
>100_bases CAATAATGAAAAAAATAGATGGGAAATCCCGCCATCCTGATGTAGCATTCCCAGGTAATTTTCCGCTTTCCCCCTTTCCG GGGAATCCTGCTTCCCTGCC
Downstream 100 bases:
>100_bases GATGCCGCCCCTGACCAACATGCTGATCTCCGCTTCCGCCGGAACGGGAAAAACCTACCAGCTCTCCCTGCGTTTCCTGG GGTTGCTGGCGCTGAACAGC
Product: ATP-dependent nuclease subunit B-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 957; Mature: 957
Protein sequence:
>957_residues MNRFFLSWDKPACRAVAERLLSLGNGFHRHLVLVPTRESGRQLREYLASISRTQAIFAPQVIPADQFPRMEEKEETASAP EELAGWLLALGKTPHRLYPRLFPRTMPEDFSSMLEMAGSLQNLRHAMANQGVSCIMAHHACAGRDERWKDMERLEGQCTQ QLESWKLEDRTAMKAEAPPRLLNSLRETGGNIILACTAEVPPPLRHALQHAERNGVPVQIWIHAPEEEAASFDSWGCPLP EEWSRRPIPIRDGQIRIAANPARLAEETCRIIARTAEGGTPDIALGVCDPDMNVALDAALRQYGWGLHNPEGKPFAGSGV MDLLRNLRRALEEKGTARPVYSLARSSLLCASLGIKGQQGCCAALDKIQQKFLPETEEYLLSRLKEAYPGAFPSIQAILE WRNRMAEPGMLGERLMEWFPALATIYGPETEAMEMFHSCLSGLMRLQQRSTAFSSPETALLLLMKCLQPLRVRNRRKAHA ALDSLGWMEVHFRPERNLILTGLNEGTVPEGGVSDQFMPEELRETLGIDSFNRKKARDSFLLTALLHSREREGSLTILLS RTSSRNDPLTPSSLLMRCPEAELPHRVERLFQEISDVPAPLPYQRGNWHLQPAEGWKTAADIGAMAPGYKNPWKEKGLAF SPSVLKRFLACPMRFWMREALHMNEEEFLPDKEDMAVNELGTMLHDVLECFCREHAVLKDGMNAASFQNAITEILEQTFR KQYGPSPLMPLLLQKRSMEQRLSVYAVQHLQALQEGWSCIAFEHQVENWILGGFPMKFRIDRIDRHADGHIRVIDYKTGA ASSCEKKHLDPLGRPDALPLLSPALHPYTKRLKNGKLAHARWKDLQLPVYVLWASETYGGHPSAAYYALPANPMDIGISS WDTLHDTMPGYEECALDSACSWTVELMKLLHEGRGLITAEELGWTPPSYDVFKDLMTSRRESLQDLLGLRLTPHLPF
Sequences:
>Translated_957_residues MNRFFLSWDKPACRAVAERLLSLGNGFHRHLVLVPTRESGRQLREYLASISRTQAIFAPQVIPADQFPRMEEKEETASAP EELAGWLLALGKTPHRLYPRLFPRTMPEDFSSMLEMAGSLQNLRHAMANQGVSCIMAHHACAGRDERWKDMERLEGQCTQ QLESWKLEDRTAMKAEAPPRLLNSLRETGGNIILACTAEVPPPLRHALQHAERNGVPVQIWIHAPEEEAASFDSWGCPLP EEWSRRPIPIRDGQIRIAANPARLAEETCRIIARTAEGGTPDIALGVCDPDMNVALDAALRQYGWGLHNPEGKPFAGSGV MDLLRNLRRALEEKGTARPVYSLARSSLLCASLGIKGQQGCCAALDKIQQKFLPETEEYLLSRLKEAYPGAFPSIQAILE WRNRMAEPGMLGERLMEWFPALATIYGPETEAMEMFHSCLSGLMRLQQRSTAFSSPETALLLLMKCLQPLRVRNRRKAHA ALDSLGWMEVHFRPERNLILTGLNEGTVPEGGVSDQFMPEELRETLGIDSFNRKKARDSFLLTALLHSREREGSLTILLS RTSSRNDPLTPSSLLMRCPEAELPHRVERLFQEISDVPAPLPYQRGNWHLQPAEGWKTAADIGAMAPGYKNPWKEKGLAF SPSVLKRFLACPMRFWMREALHMNEEEFLPDKEDMAVNELGTMLHDVLECFCREHAVLKDGMNAASFQNAITEILEQTFR KQYGPSPLMPLLLQKRSMEQRLSVYAVQHLQALQEGWSCIAFEHQVENWILGGFPMKFRIDRIDRHADGHIRVIDYKTGA ASSCEKKHLDPLGRPDALPLLSPALHPYTKRLKNGKLAHARWKDLQLPVYVLWASETYGGHPSAAYYALPANPMDIGISS WDTLHDTMPGYEECALDSACSWTVELMKLLHEGRGLITAEELGWTPPSYDVFKDLMTSRRESLQDLLGLRLTPHLPF >Mature_957_residues MNRFFLSWDKPACRAVAERLLSLGNGFHRHLVLVPTRESGRQLREYLASISRTQAIFAPQVIPADQFPRMEEKEETASAP EELAGWLLALGKTPHRLYPRLFPRTMPEDFSSMLEMAGSLQNLRHAMANQGVSCIMAHHACAGRDERWKDMERLEGQCTQ QLESWKLEDRTAMKAEAPPRLLNSLRETGGNIILACTAEVPPPLRHALQHAERNGVPVQIWIHAPEEEAASFDSWGCPLP EEWSRRPIPIRDGQIRIAANPARLAEETCRIIARTAEGGTPDIALGVCDPDMNVALDAALRQYGWGLHNPEGKPFAGSGV MDLLRNLRRALEEKGTARPVYSLARSSLLCASLGIKGQQGCCAALDKIQQKFLPETEEYLLSRLKEAYPGAFPSIQAILE WRNRMAEPGMLGERLMEWFPALATIYGPETEAMEMFHSCLSGLMRLQQRSTAFSSPETALLLLMKCLQPLRVRNRRKAHA ALDSLGWMEVHFRPERNLILTGLNEGTVPEGGVSDQFMPEELRETLGIDSFNRKKARDSFLLTALLHSREREGSLTILLS RTSSRNDPLTPSSLLMRCPEAELPHRVERLFQEISDVPAPLPYQRGNWHLQPAEGWKTAADIGAMAPGYKNPWKEKGLAF SPSVLKRFLACPMRFWMREALHMNEEEFLPDKEDMAVNELGTMLHDVLECFCREHAVLKDGMNAASFQNAITEILEQTFR KQYGPSPLMPLLLQKRSMEQRLSVYAVQHLQALQEGWSCIAFEHQVENWILGGFPMKFRIDRIDRHADGHIRVIDYKTGA ASSCEKKHLDPLGRPDALPLLSPALHPYTKRLKNGKLAHARWKDLQLPVYVLWASETYGGHPSAAYYALPANPMDIGISS WDTLHDTMPGYEECALDSACSWTVELMKLLHEGRGLITAEELGWTPPSYDVFKDLMTSRRESLQDLLGLRLTPHLPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107986; Mature: 107986
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFFLSWDKPACRAVAERLLSLGNGFHRHLVLVPTRESGRQLREYLASISRTQAIFAPQ CCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCC VIPADQFPRMEEKEETASAPEELAGWLLALGKTPHRLYPRLFPRTMPEDFSSMLEMAGSL CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH QNLRHAMANQGVSCIMAHHACAGRDERWKDMERLEGQCTQQLESWKLEDRTAMKAEAPPR HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHH LLNSLRETGGNIILACTAEVPPPLRHALQHAERNGVPVQIWIHAPEEEAASFDSWGCPLP HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCC EEWSRRPIPIRDGQIRIAANPARLAEETCRIIARTAEGGTPDIALGVCDPDMNVALDAAL HHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH RQYGWGLHNPEGKPFAGSGVMDLLRNLRRALEEKGTARPVYSLARSSLLCASLGIKGQQG HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC CCAALDKIQQKFLPETEEYLLSRLKEAYPGAFPSIQAILEWRNRMAEPGMLGERLMEWFP HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH ALATIYGPETEAMEMFHSCLSGLMRLQQRSTAFSSPETALLLLMKCLQPLRVRNRRKAHA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALDSLGWMEVHFRPERNLILTGLNEGTVPEGGVSDQFMPEELRETLGIDSFNRKKARDSF HHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH LLTALLHSREREGSLTILLSRTSSRNDPLTPSSLLMRCPEAELPHRVERLFQEISDVPAP HHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC LPYQRGNWHLQPAEGWKTAADIGAMAPGYKNPWKEKGLAFSPSVLKRFLACPMRFWMREA CCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH LHMNEEEFLPDKEDMAVNELGTMLHDVLECFCREHAVLKDGMNAASFQNAITEILEQTFR HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KQYGPSPLMPLLLQKRSMEQRLSVYAVQHLQALQEGWSCIAFEHQVENWILGGFPMKFRI HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHEECCCCCEEEH DRIDRHADGHIRVIDYKTGAASSCEKKHLDPLGRPDALPLLSPALHPYTKRLKNGKLAHA HHHHCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCHHCHHHHHHHHHHCCCCCCCC RWKDLQLPVYVLWASETYGGHPSAAYYALPANPMDIGISSWDTLHDTMPGYEECALDSAC HHCCCCCCEEEEEECCCCCCCCCCEEEEECCCCHHCCCCCHHHHHHCCCCHHHHHCCHHH SWTVELMKLLHEGRGLITAEELGWTPPSYDVFKDLMTSRRESLQDLLGLRLTPHLPF HHHHHHHHHHHCCCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNRFFLSWDKPACRAVAERLLSLGNGFHRHLVLVPTRESGRQLREYLASISRTQAIFAPQ CCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCC VIPADQFPRMEEKEETASAPEELAGWLLALGKTPHRLYPRLFPRTMPEDFSSMLEMAGSL CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH QNLRHAMANQGVSCIMAHHACAGRDERWKDMERLEGQCTQQLESWKLEDRTAMKAEAPPR HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHH LLNSLRETGGNIILACTAEVPPPLRHALQHAERNGVPVQIWIHAPEEEAASFDSWGCPLP HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCCCCC EEWSRRPIPIRDGQIRIAANPARLAEETCRIIARTAEGGTPDIALGVCDPDMNVALDAAL HHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH RQYGWGLHNPEGKPFAGSGVMDLLRNLRRALEEKGTARPVYSLARSSLLCASLGIKGQQG HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC CCAALDKIQQKFLPETEEYLLSRLKEAYPGAFPSIQAILEWRNRMAEPGMLGERLMEWFP HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH ALATIYGPETEAMEMFHSCLSGLMRLQQRSTAFSSPETALLLLMKCLQPLRVRNRRKAHA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALDSLGWMEVHFRPERNLILTGLNEGTVPEGGVSDQFMPEELRETLGIDSFNRKKARDSF HHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH LLTALLHSREREGSLTILLSRTSSRNDPLTPSSLLMRCPEAELPHRVERLFQEISDVPAP HHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC LPYQRGNWHLQPAEGWKTAADIGAMAPGYKNPWKEKGLAFSPSVLKRFLACPMRFWMREA CCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH LHMNEEEFLPDKEDMAVNELGTMLHDVLECFCREHAVLKDGMNAASFQNAITEILEQTFR HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KQYGPSPLMPLLLQKRSMEQRLSVYAVQHLQALQEGWSCIAFEHQVENWILGGFPMKFRI HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHEECCCCCEEEH DRIDRHADGHIRVIDYKTGAASSCEKKHLDPLGRPDALPLLSPALHPYTKRLKNGKLAHA HHHHCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCHHCHHHHHHHHHHCCCCCCCC RWKDLQLPVYVLWASETYGGHPSAAYYALPANPMDIGISSWDTLHDTMPGYEECALDSAC HHCCCCCCEEEEEECCCCCCCCCCEEEEECCCCHHCCCCCHHHHHHCCCCHHHHHCCHHH SWTVELMKLLHEGRGLITAEELGWTPPSYDVFKDLMTSRRESLQDLLGLRLTPHLPF HHHHHHHHHHHCCCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA