Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is gmk [H]
Identifier: 187735980
GI number: 187735980
Start: 1779046
End: 1779648
Strand: Direct
Name: gmk [H]
Synonym: Amuc_1489
Alternate gene names: 187735980
Gene position: 1779046-1779648 (Clockwise)
Preceding gene: 187735979
Following gene: 187735982
Centisome position: 66.78
GC content: 57.88
Gene sequence:
>603_bases ATGACAGCCATGAAACAGCCATTGGGAACATTGCTGGTGGTATCCGGGCCTTCCGGTTCCGGGAAGACGACGTTGTGCCG CCGCGCGACGGAAAACGGTCTGTGTGTGTACAGCATTTCCTGCACGACGCGCCAGCCCAGACCCGGGGAAGTCAATGGAG TGGATTACCATTTCCTGACTCCCGCCGAATTTGACGCCAGGGTGGAGCGGGGAGACTTTCTGGAATATGCGGAGGTGCAC GGCAACCGCTACGGTACGCTGAAAGCGGATATTTTGACTCTTCTGGAACAGGGGAAAAACGTGGTGATGGATATTGACGT GCAGGGGGCTGGGCAAGTCCGTTCCTGCCGGGAGGGCATTCTACCCCTCTGCTATGTGGACGTTTACATTTATGTGCCGC AGGCGGAGCTTAAAAACCGCCTTTGCGGACGGCAGACGGATGGCGCTGAAACCATTGCCCTGCGTCTTCGCAATGCGGAA CAGGAAGACGCCTGCCTGCCGCAGTACCAGTACTGCCTGGTTTCCTCCGACCGCGAGACGGATTATGCTTCCTTTTGCGC CCTGCTCAAATGCCAGTCCATGCGGGTGGGACTGATGCGGTGA
Upstream 100 bases:
>100_bases ACACCATCGGCTCCAAGGCGAACGATTCCACGCTGGCCCATCTGGTTGTGGCTGCCAAGACGGAGCTGGAGAAAATCAGG GAACAGGTTCAGAACATCGA
Downstream 100 bases:
>100_bases TAAGGTCTTGCCTGTTTATCGAGAGACTGCGTTCTCTCGTTTCGTCCCCCGTCACATGGCATCCGGGATGGCGGCTCCGG TTCCGAGACATTTGGAATTG
Product: Guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTAMKQPLGTLLVVSGPSGSGKTTLCRRATENGLCVYSISCTTRQPRPGEVNGVDYHFLTPAEFDARVERGDFLEYAEVH GNRYGTLKADILTLLEQGKNVVMDIDVQGAGQVRSCREGILPLCYVDVYIYVPQAELKNRLCGRQTDGAETIALRLRNAE QEDACLPQYQYCLVSSDRETDYASFCALLKCQSMRVGLMR
Sequences:
>Translated_200_residues MTAMKQPLGTLLVVSGPSGSGKTTLCRRATENGLCVYSISCTTRQPRPGEVNGVDYHFLTPAEFDARVERGDFLEYAEVH GNRYGTLKADILTLLEQGKNVVMDIDVQGAGQVRSCREGILPLCYVDVYIYVPQAELKNRLCGRQTDGAETIALRLRNAE QEDACLPQYQYCLVSSDRETDYASFCALLKCQSMRVGLMR >Mature_199_residues TAMKQPLGTLLVVSGPSGSGKTTLCRRATENGLCVYSISCTTRQPRPGEVNGVDYHFLTPAEFDARVERGDFLEYAEVHG NRYGTLKADILTLLEQGKNVVMDIDVQGAGQVRSCREGILPLCYVDVYIYVPQAELKNRLCGRQTDGAETIALRLRNAEQ EDACLPQYQYCLVSSDRETDYASFCALLKCQSMRVGLMR
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=154, Percent_Identity=38.961038961039, Blast_Score=100, Evalue=6e-22, Organism=Homo sapiens, GI4504221, Length=154, Percent_Identity=38.961038961039, Blast_Score=100, Evalue=6e-22, Organism=Homo sapiens, GI226874831, Length=154, Percent_Identity=38.961038961039, Blast_Score=100, Evalue=7e-22, Organism=Escherichia coli, GI1790080, Length=194, Percent_Identity=39.1752577319588, Blast_Score=126, Evalue=9e-31, Organism=Caenorhabditis elegans, GI193203132, Length=186, Percent_Identity=34.4086021505376, Blast_Score=103, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17508835, Length=186, Percent_Identity=34.4086021505376, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17557440, Length=182, Percent_Identity=28.021978021978, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320662, Length=154, Percent_Identity=40.2597402597403, Blast_Score=112, Evalue=3e-26, Organism=Drosophila melanogaster, GI21356141, Length=162, Percent_Identity=37.6543209876543, Blast_Score=93, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 22189; Mature: 22057
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMKQPLGTLLVVSGPSGSGKTTLCRRATENGLCVYSISCTTRQPRPGEVNGVDYHFLT CCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEC PAEFDARVERGDFLEYAEVHGNRYGTLKADILTLLEQGKNVVMDIDVQGAGQVRSCREGI CCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCC LPLCYVDVYIYVPQAELKNRLCGRQTDGAETIALRLRNAEQEDACLPQYQYCLVSSDRET CEEEEEEEEEEECCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCC DYASFCALLKCQSMRVGLMR CHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TAMKQPLGTLLVVSGPSGSGKTTLCRRATENGLCVYSISCTTRQPRPGEVNGVDYHFLT CCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEC PAEFDARVERGDFLEYAEVHGNRYGTLKADILTLLEQGKNVVMDIDVQGAGQVRSCREGI CCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCC LPLCYVDVYIYVPQAELKNRLCGRQTDGAETIALRLRNAEQEDACLPQYQYCLVSSDRET CEEEEEEEEEEECCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCC DYASFCALLKCQSMRVGLMR CHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]