Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is argC
Identifier: 187735938
GI number: 187735938
Start: 1737891
End: 1738934
Strand: Direct
Name: argC
Synonym: Amuc_1447
Alternate gene names: 187735938
Gene position: 1737891-1738934 (Clockwise)
Preceding gene: 187735935
Following gene: 187735939
Centisome position: 65.23
GC content: 60.06
Gene sequence:
>1044_bases ATGAAGCAAGTTCAAGTTGCAGTCGTCGGGGCCAGTGGCTACACCGGGCAGGAATTGTTGCGCATCCTGCTGAACCATCG CGGGGTGAAGCTGGTGTGCGCTACTTCCCGCCAGTATGCCGGGCAGCCGTTGTGGGAGGTTTTTCCCCGTTTTCGTCAGG TTCCGGGTTCCGGCCTGAAGTTTACGGATTCCGATGTGGAGGCGATTGCCGCCACTGGGGCGGAGGTCGCTTTTCTGGCC CTGCCTCATGGCGTGGCTGCTTCCTATGCCCGCGGCCTGGTGGACAGGGGCGTGCGCGTGATTGACCTGAGCGCGGATTT TCGCCTGGACAGCCCGGATGTGTACGAAGAGTATTACGGGAACCCCCACCCGGATACGGCCCTGATGCAGGAAGCCGTGT ACGGTTTGCCGGAGTGGCGCCGGGAGGAGATTGCCCGGGCGCGCATTGTGGCTTCCCCCGGCTGCTATCCCACCAGCATT CTTCTGCCTCTCATTCCCTTGTTCAGGGCGGGCATGCTGGAGCCGGAGGACGTGGTGGCCTGTTCCGGCAGCGGCGTGAG CGGAGCAGGGCGCAAGGCATCCATTCCGCTGCTGTTCTGCGAGTGCAATGAGAGTTTTCATGCTTACGGAGTACCGAAAC ACCGCCATTTGAGCGAAATTGAGCAGGAGCTTTCCCATGCCGCCGGGGAAACGGTGGTGATGTCCTTCACCCCCCATTTG ATTCCCGTTAATACGGGTATTTGCTCCACGATTACGGCCAAAGTGAAAAAAGGGGCGGACCCCGAGTCCGTCGGCCGCCT GCTGGAAGAAGCCTATGCTGCGGCCCCGTTCGTCCGCCTTCTGGGGCGTAACCAGCCTGCGGATACCAAGAATGTAACAC GGACGAACTGCGTGGATATTGGCTGGGCTTATGATCCCCGCACGAACCGCGTGATTCTGATGAGCGCAGAGGATAATGTG GTGAAGGGCGCGGGTGGGCAGGCCGTTCAGTCCTTCAATATCATGTGCGGATTTGATGAAACGGAAGGCTTGTGGGTTCT GTAG
Upstream 100 bases:
>100_bases GAACTCGGACCGACCGGGGTCGTGTCTTGTGACGGCGAGGTGTATATAGGAAAACTTTAGTGTTGGCAAGAGTCTTTTTT CATAGCATACCTTTTTTGTC
Downstream 100 bases:
>100_bases CTTTTTGATACGCTGAAAGGCACTTTCAAGACGATGAATGATTCATCCTATATTCCGGTTGACGGGGGCGTTTGCGCGCC CCAGGGCTTTTTGGGGAGCG
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKQVQVAVVGASGYTGQELLRILLNHRGVKLVCATSRQYAGQPLWEVFPRFRQVPGSGLKFTDSDVEAIAATGAEVAFLA LPHGVAASYARGLVDRGVRVIDLSADFRLDSPDVYEEYYGNPHPDTALMQEAVYGLPEWRREEIARARIVASPGCYPTSI LLPLIPLFRAGMLEPEDVVACSGSGVSGAGRKASIPLLFCECNESFHAYGVPKHRHLSEIEQELSHAAGETVVMSFTPHL IPVNTGICSTITAKVKKGADPESVGRLLEEAYAAAPFVRLLGRNQPADTKNVTRTNCVDIGWAYDPRTNRVILMSAEDNV VKGAGGQAVQSFNIMCGFDETEGLWVL
Sequences:
>Translated_347_residues MKQVQVAVVGASGYTGQELLRILLNHRGVKLVCATSRQYAGQPLWEVFPRFRQVPGSGLKFTDSDVEAIAATGAEVAFLA LPHGVAASYARGLVDRGVRVIDLSADFRLDSPDVYEEYYGNPHPDTALMQEAVYGLPEWRREEIARARIVASPGCYPTSI LLPLIPLFRAGMLEPEDVVACSGSGVSGAGRKASIPLLFCECNESFHAYGVPKHRHLSEIEQELSHAAGETVVMSFTPHL IPVNTGICSTITAKVKKGADPESVGRLLEEAYAAAPFVRLLGRNQPADTKNVTRTNCVDIGWAYDPRTNRVILMSAEDNV VKGAGGQAVQSFNIMCGFDETEGLWVL >Mature_347_residues MKQVQVAVVGASGYTGQELLRILLNHRGVKLVCATSRQYAGQPLWEVFPRFRQVPGSGLKFTDSDVEAIAATGAEVAFLA LPHGVAASYARGLVDRGVRVIDLSADFRLDSPDVYEEYYGNPHPDTALMQEAVYGLPEWRREEIARARIVASPGCYPTSI LLPLIPLFRAGMLEPEDVVACSGSGVSGAGRKASIPLLFCECNESFHAYGVPKHRHLSEIEQELSHAAGETVVMSFTPHL IPVNTGICSTITAKVKKGADPESVGRLLEEAYAAAPFVRLLGRNQPADTKNVTRTNCVDIGWAYDPRTNRVILMSAEDNV VKGAGGQAVQSFNIMCGFDETEGLWVL
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1790396, Length=341, Percent_Identity=39.0029325513196, Blast_Score=191, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6320913, Length=346, Percent_Identity=27.4566473988439, Blast_Score=93, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGC_AKKM8 (B2UKZ6)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001878050.1 - ProteinModelPortal: B2UKZ6 - SMR: B2UKZ6 - GeneID: 6275797 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_1447 - HOGENOM: HBG294213 - OMA: VCRIAVH - ProtClustDB: CLSK2335560 - GO: GO:0005737 - HAMAP: MF_00150 - InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 - Gene3D: G3DSA:3.40.50.720 - SMART: SM00859 - TIGRFAMs: TIGR01850
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC
EC number: =1.2.1.38
Molecular weight: Translated: 37587; Mature: 37587
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS01224 ARGC
Important sites: ACT_SITE 155-155
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVQVAVVGASGYTGQELLRILLNHRGVKLVCATSRQYAGQPLWEVFPRFRQVPGSGLK CCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHHHCCCCCCE FTDSDVEAIAATGAEVAFLALPHGVAASYARGLVDRGVRVIDLSADFRLDSPDVYEEYYG ECCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCC NPHPDTALMQEAVYGLPEWRREEIARARIVASPGCYPTSILLPLIPLFRAGMLEPEDVVA CCCCCHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCHHEEE CSGSGVSGAGRKASIPLLFCECNESFHAYGVPKHRHLSEIEQELSHAAGETVVMSFTPHL ECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCE IPVNTGICSTITAKVKKGADPESVGRLLEEAYAAAPFVRLLGRNQPADTKNVTRTNCVDI EEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE GWAYDPRTNRVILMSAEDNVVKGAGGQAVQSFNIMCGFDETEGLWVL CCCCCCCCCEEEEEECCCCEEECCCCCCEEEEEEEECCCCCCCEEEC >Mature Secondary Structure MKQVQVAVVGASGYTGQELLRILLNHRGVKLVCATSRQYAGQPLWEVFPRFRQVPGSGLK CCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHHHCCCCCCE FTDSDVEAIAATGAEVAFLALPHGVAASYARGLVDRGVRVIDLSADFRLDSPDVYEEYYG ECCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHCC NPHPDTALMQEAVYGLPEWRREEIARARIVASPGCYPTSILLPLIPLFRAGMLEPEDVVA CCCCCHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCHHEEE CSGSGVSGAGRKASIPLLFCECNESFHAYGVPKHRHLSEIEQELSHAAGETVVMSFTPHL ECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCE IPVNTGICSTITAKVKKGADPESVGRLLEEAYAAAPFVRLLGRNQPADTKNVTRTNCVDI EEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE GWAYDPRTNRVILMSAEDNVVKGAGGQAVQSFNIMCGFDETEGLWVL CCCCCCCCCEEEEEECCCCEEECCCCCCEEEEEEEECCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA