Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is tilS [H]
Identifier: 187735920
GI number: 187735920
Start: 1715438
End: 1716442
Strand: Reverse
Name: tilS [H]
Synonym: Amuc_1429
Alternate gene names: 187735920
Gene position: 1716442-1715438 (Counterclockwise)
Preceding gene: 187735921
Following gene: 187735918
Centisome position: 64.43
GC content: 59.5
Gene sequence:
>1005_bases ATGTTGACACCGGACCATTTTGACAGCCAGTCCGCGGAACTCCTCCGCTCCGGCCGCCCCGTCCTTGCCGGAATCAGCGG GGGGAGGGACTCCATGGCTTTGCTTTCCCTGCTGTCCGGCATGCCGGGATGCAATCTGGTTGCATGCCATGTAAATCACC AGCTGCGTCCGGAAGCGGAGGAAGAGGAAATGTTTGTGCTCCGTTACGCCGCCTCCCTGGGTATTCCCTGTGTCCGGGAA CGCGTCAATGTCCGCAGTATGGCCCATACCCGCGGAATAGCCATTGAAGAAGCGGCCAGGGAAGCCAGGCAGGCCTCGTT TCTGAAATGGGCCGCCGGTTACCCGGGGGCTCTCGTGGCTCTGGCCCACCACCGGAACGACCAGCAGGAAACGGCCCTTC TTCACCTCTGCCGCGGTGCCTCCGGCATTCACGGTATGTTCCCCGTCTCCACCTGGGCCAACGGATTGACCGTCGTACGC CCCATGCTGGATTTTTCCCGGGAGGATATCACCTCCTATCTGGAGCATCGCCATATTCCATGGAGGGAAGATTCCAGCAA CCAGTCTGCCGAATATACCAGGAACGCCCTGCGCCATGAGATTATTCCCAAATTGAATGCGCTGTTCCAAAGGGACACCA GCCTTCCCTTTTCACGTGCCTGCCACCTGGAAAATCAAATCCGCACGGCGCTTTCCCAGGCGCTGGACTCCATGAACCTG ACAGATCCCCAGGGGCGCCTGTTCTTGCCGAAAATCAACCTGCTTCCTGCGGAGCTGAGACAATGCGCCGTGCATGATTA CCTGCGCCGGCAACATATTCCGGACCTGACGGAAGACGCCGTACTCCGGGTAATGGACATCCTGAATACGGACGGCCCTT CCCGAACTTCCCTGCCCGGCGGAAAACTGGCCGTACGCAAGGAAAAGCGCCTGCTGGTCACGGACACGCCGCGCCCGGTC AATAAAGCGGAGCAACCCCCTGCGGATACAACAGGTGGAATTTAA
Upstream 100 bases:
>100_bases CCTTCAGCAATTTTCCAACCCCGTTTCCTTCCCGGAAAACGGGGTTTTTATTTGCAGGCTTCCTTTGATCTCTTTTTCCT GATTCACTCGCAGCAGCACC
Downstream 100 bases:
>100_bases TGGCTTCATTCCCCACCACCAGCGCAGTACCGAACATCCTGTCTTCATCTGTCAGCCGCGGCAGCTGGGCAATCGGGAAG AGCAGACCGCCCAGAATAAG
Product: tRNA(Ile)-lysidine synthetase
Products: NA
Alternate protein names: tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthetase [H]
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLTPDHFDSQSAELLRSGRPVLAGISGGRDSMALLSLLSGMPGCNLVACHVNHQLRPEAEEEEMFVLRYAASLGIPCVRE RVNVRSMAHTRGIAIEEAAREARQASFLKWAAGYPGALVALAHHRNDQQETALLHLCRGASGIHGMFPVSTWANGLTVVR PMLDFSREDITSYLEHRHIPWREDSSNQSAEYTRNALRHEIIPKLNALFQRDTSLPFSRACHLENQIRTALSQALDSMNL TDPQGRLFLPKINLLPAELRQCAVHDYLRRQHIPDLTEDAVLRVMDILNTDGPSRTSLPGGKLAVRKEKRLLVTDTPRPV NKAEQPPADTTGGI
Sequences:
>Translated_334_residues MLTPDHFDSQSAELLRSGRPVLAGISGGRDSMALLSLLSGMPGCNLVACHVNHQLRPEAEEEEMFVLRYAASLGIPCVRE RVNVRSMAHTRGIAIEEAAREARQASFLKWAAGYPGALVALAHHRNDQQETALLHLCRGASGIHGMFPVSTWANGLTVVR PMLDFSREDITSYLEHRHIPWREDSSNQSAEYTRNALRHEIIPKLNALFQRDTSLPFSRACHLENQIRTALSQALDSMNL TDPQGRLFLPKINLLPAELRQCAVHDYLRRQHIPDLTEDAVLRVMDILNTDGPSRTSLPGGKLAVRKEKRLLVTDTPRPV NKAEQPPADTTGGI >Mature_334_residues MLTPDHFDSQSAELLRSGRPVLAGISGGRDSMALLSLLSGMPGCNLVACHVNHQLRPEAEEEEMFVLRYAASLGIPCVRE RVNVRSMAHTRGIAIEEAAREARQASFLKWAAGYPGALVALAHHRNDQQETALLHLCRGASGIHGMFPVSTWANGLTVVR PMLDFSREDITSYLEHRHIPWREDSSNQSAEYTRNALRHEIIPKLNALFQRDTSLPFSRACHLENQIRTALSQALDSMNL TDPQGRLFLPKINLLPAELRQCAVHDYLRRQHIPDLTEDAVLRVMDILNTDGPSRTSLPGGKLAVRKEKRLLVTDTPRPV NKAEQPPADTTGGI
Specific function: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionin
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA(Ile)-lysidine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786386, Length=279, Percent_Identity=30.4659498207885, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012094 - InterPro: IPR012796 - InterPro: IPR012795 - InterPro: IPR020825 - InterPro: IPR014729 - InterPro: IPR011063 [H]
Pfam domain/function: PF01171 ATP_bind_3; PF11734 TilS_C [H]
EC number: NA
Molecular weight: Translated: 37116; Mature: 37116
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTPDHFDSQSAELLRSGRPVLAGISGGRDSMALLSLLSGMPGCNLVACHVNHQLRPEAE CCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC EEEMFVLRYAASLGIPCVRERVNVRSMAHTRGIAIEEAAREARQASFLKWAAGYPGALVA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH LAHHRNDQQETALLHLCRGASGIHGMFPVSTWANGLTVVRPMLDFSREDITSYLEHRHIP HHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCC WREDSSNQSAEYTRNALRHEIIPKLNALFQRDTSLPFSRACHLENQIRTALSQALDSMNL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC TDPQGRLFLPKINLLPAELRQCAVHDYLRRQHIPDLTEDAVLRVMDILNTDGPSRTSLPG CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC GKLAVRKEKRLLVTDTPRPVNKAEQPPADTTGGI CCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTPDHFDSQSAELLRSGRPVLAGISGGRDSMALLSLLSGMPGCNLVACHVNHQLRPEAE CCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC EEEMFVLRYAASLGIPCVRERVNVRSMAHTRGIAIEEAAREARQASFLKWAAGYPGALVA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH LAHHRNDQQETALLHLCRGASGIHGMFPVSTWANGLTVVRPMLDFSREDITSYLEHRHIP HHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCC WREDSSNQSAEYTRNALRHEIIPKLNALFQRDTSLPFSRACHLENQIRTALSQALDSMNL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC TDPQGRLFLPKINLLPAELRQCAVHDYLRRQHIPDLTEDAVLRVMDILNTDGPSRTSLPG CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC GKLAVRKEKRLLVTDTPRPVNKAEQPPADTTGGI CCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA