Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is pssA [H]
Identifier: 187735877
GI number: 187735877
Start: 1651999
End: 1652823
Strand: Direct
Name: pssA [H]
Synonym: Amuc_1384
Alternate gene names: 187735877
Gene position: 1651999-1652823 (Clockwise)
Preceding gene: 187735876
Following gene: 187735879
Centisome position: 62.01
GC content: 57.58
Gene sequence:
>825_bases ATGGATAAGAAGATTTTCCCGGACGAACCTGAGATTCCCATTTTGCCTAATTTGTTTACGGCAGGGAACCTGGTGTGCGG TTTTTTCGCCATTCTGACGATTTTTGAGGGAATCAACCAGGCGGACAGCGACGCTGTGGCTGCTTTTTCCTATTATCAGA ATGCCACTTTTTTAATCTTCGCGGCATGTTTGTTTGACTTGTTTGACGGCCGTATTGCCCGCATGCGCGGGCAGGACGGC CCGTTCGGGCGGGAATTCGATTCTCTGGCGGATATTGTCTCCTTCGGCATTGCCCCGGCGCTGCTGGTAGCCAAGGCCGT CCTGTTCCAGCTGTCCCCTCCGGAGGTGGGTTGGGGCATCGGCATCCTGTATCTGCTGTGCGCCGCGCTGCGCCTGGCGC GGTTTAATTGCATGGCGGCCGCTCCCCGGAAGGAAGGCCAGAGCAGCGATTTTGTGGGTCTGCCCGTTCCGATGGCGGCG GGAGCCGTGGTCTCCACCATGTACCTGGTGATGTATCTGGCAGGCAGGGTTCCGGACGGGGCCATGGACCTGGGCGTCTT CAAATACGTGATTGCGCTGGCAATGGCGGGAGTCTCCATTCTGATGATGAGCCGGGTGGTCTATCCCAGCTTCAAGCATA TCAACATGCGCACGCGGGGGACGATGTACGCGATTGTGTTCATCGTGCTGGCGGTCATCTGCATTTTCAAATTCCCGTGG GTGATGCCCGCAGTCATTTTTTCCATTTATCTGCTTTACGGGCTGGTGCGGCCCTGGGTGGCCCGCCGCTGGCGGAACAG GCTGGAAGCCCGTGATGGAGAATAG
Upstream 100 bases:
>100_bases GTTCCGCTCCGCAGGATGCCGATCCTCAGGCCCTGGCTGCCGCCGCCCGCAATATTATTAACGGATAAACCCCTTACCTG GGCCCTATCGGACACCAATC
Downstream 100 bases:
>100_bases GAAGACTTTCAGAAAACTGTTCCTGCCTCTTCTTTGAACAGACCATGCTGCGCCGGATTGGTGCCGGGCGGCGGTGTCTC CGCAGCCCGGTTCCGGGAAT
Product: CDP-diacylglycerol/serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MDKKIFPDEPEIPILPNLFTAGNLVCGFFAILTIFEGINQADSDAVAAFSYYQNATFLIFAACLFDLFDGRIARMRGQDG PFGREFDSLADIVSFGIAPALLVAKAVLFQLSPPEVGWGIGILYLLCAALRLARFNCMAAAPRKEGQSSDFVGLPVPMAA GAVVSTMYLVMYLAGRVPDGAMDLGVFKYVIALAMAGVSILMMSRVVYPSFKHINMRTRGTMYAIVFIVLAVICIFKFPW VMPAVIFSIYLLYGLVRPWVARRWRNRLEARDGE
Sequences:
>Translated_274_residues MDKKIFPDEPEIPILPNLFTAGNLVCGFFAILTIFEGINQADSDAVAAFSYYQNATFLIFAACLFDLFDGRIARMRGQDG PFGREFDSLADIVSFGIAPALLVAKAVLFQLSPPEVGWGIGILYLLCAALRLARFNCMAAAPRKEGQSSDFVGLPVPMAA GAVVSTMYLVMYLAGRVPDGAMDLGVFKYVIALAMAGVSILMMSRVVYPSFKHINMRTRGTMYAIVFIVLAVICIFKFPW VMPAVIFSIYLLYGLVRPWVARRWRNRLEARDGE >Mature_274_residues MDKKIFPDEPEIPILPNLFTAGNLVCGFFAILTIFEGINQADSDAVAAFSYYQNATFLIFAACLFDLFDGRIARMRGQDG PFGREFDSLADIVSFGIAPALLVAKAVLFQLSPPEVGWGIGILYLLCAALRLARFNCMAAAPRKEGQSSDFVGLPVPMAA GAVVSTMYLVMYLAGRVPDGAMDLGVFKYVIALAMAGVSILMMSRVVYPSFKHINMRTRGTMYAIVFIVLAVICIFKFPW VMPAVIFSIYLLYGLVRPWVARRWRNRLEARDGE
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=178, Percent_Identity=35.3932584269663, Blast_Score=86, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 30256; Mature: 30256
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKIFPDEPEIPILPNLFTAGNLVCGFFAILTIFEGINQADSDAVAAFSYYQNATFLIF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHH AACLFDLFDGRIARMRGQDGPFGREFDSLADIVSFGIAPALLVAKAVLFQLSPPEVGWGI HHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH GILYLLCAALRLARFNCMAAAPRKEGQSSDFVGLPVPMAAGAVVSTMYLVMYLAGRVPDG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC AMDLGVFKYVIALAMAGVSILMMSRVVYPSFKHINMRTRGTMYAIVFIVLAVICIFKFPW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VMPAVIFSIYLLYGLVRPWVARRWRNRLEARDGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDKKIFPDEPEIPILPNLFTAGNLVCGFFAILTIFEGINQADSDAVAAFSYYQNATFLIF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHH AACLFDLFDGRIARMRGQDGPFGREFDSLADIVSFGIAPALLVAKAVLFQLSPPEVGWGI HHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH GILYLLCAALRLARFNCMAAAPRKEGQSSDFVGLPVPMAAGAVVSTMYLVMYLAGRVPDG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC AMDLGVFKYVIALAMAGVSILMMSRVVYPSFKHINMRTRGTMYAIVFIVLAVICIFKFPW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VMPAVIFSIYLLYGLVRPWVARRWRNRLEARDGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]