Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is pssA [H]

Identifier: 187735877

GI number: 187735877

Start: 1651999

End: 1652823

Strand: Direct

Name: pssA [H]

Synonym: Amuc_1384

Alternate gene names: 187735877

Gene position: 1651999-1652823 (Clockwise)

Preceding gene: 187735876

Following gene: 187735879

Centisome position: 62.01

GC content: 57.58

Gene sequence:

>825_bases
ATGGATAAGAAGATTTTCCCGGACGAACCTGAGATTCCCATTTTGCCTAATTTGTTTACGGCAGGGAACCTGGTGTGCGG
TTTTTTCGCCATTCTGACGATTTTTGAGGGAATCAACCAGGCGGACAGCGACGCTGTGGCTGCTTTTTCCTATTATCAGA
ATGCCACTTTTTTAATCTTCGCGGCATGTTTGTTTGACTTGTTTGACGGCCGTATTGCCCGCATGCGCGGGCAGGACGGC
CCGTTCGGGCGGGAATTCGATTCTCTGGCGGATATTGTCTCCTTCGGCATTGCCCCGGCGCTGCTGGTAGCCAAGGCCGT
CCTGTTCCAGCTGTCCCCTCCGGAGGTGGGTTGGGGCATCGGCATCCTGTATCTGCTGTGCGCCGCGCTGCGCCTGGCGC
GGTTTAATTGCATGGCGGCCGCTCCCCGGAAGGAAGGCCAGAGCAGCGATTTTGTGGGTCTGCCCGTTCCGATGGCGGCG
GGAGCCGTGGTCTCCACCATGTACCTGGTGATGTATCTGGCAGGCAGGGTTCCGGACGGGGCCATGGACCTGGGCGTCTT
CAAATACGTGATTGCGCTGGCAATGGCGGGAGTCTCCATTCTGATGATGAGCCGGGTGGTCTATCCCAGCTTCAAGCATA
TCAACATGCGCACGCGGGGGACGATGTACGCGATTGTGTTCATCGTGCTGGCGGTCATCTGCATTTTCAAATTCCCGTGG
GTGATGCCCGCAGTCATTTTTTCCATTTATCTGCTTTACGGGCTGGTGCGGCCCTGGGTGGCCCGCCGCTGGCGGAACAG
GCTGGAAGCCCGTGATGGAGAATAG

Upstream 100 bases:

>100_bases
GTTCCGCTCCGCAGGATGCCGATCCTCAGGCCCTGGCTGCCGCCGCCCGCAATATTATTAACGGATAAACCCCTTACCTG
GGCCCTATCGGACACCAATC

Downstream 100 bases:

>100_bases
GAAGACTTTCAGAAAACTGTTCCTGCCTCTTCTTTGAACAGACCATGCTGCGCCGGATTGGTGCCGGGCGGCGGTGTCTC
CGCAGCCCGGTTCCGGGAAT

Product: CDP-diacylglycerol/serine O-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MDKKIFPDEPEIPILPNLFTAGNLVCGFFAILTIFEGINQADSDAVAAFSYYQNATFLIFAACLFDLFDGRIARMRGQDG
PFGREFDSLADIVSFGIAPALLVAKAVLFQLSPPEVGWGIGILYLLCAALRLARFNCMAAAPRKEGQSSDFVGLPVPMAA
GAVVSTMYLVMYLAGRVPDGAMDLGVFKYVIALAMAGVSILMMSRVVYPSFKHINMRTRGTMYAIVFIVLAVICIFKFPW
VMPAVIFSIYLLYGLVRPWVARRWRNRLEARDGE

Sequences:

>Translated_274_residues
MDKKIFPDEPEIPILPNLFTAGNLVCGFFAILTIFEGINQADSDAVAAFSYYQNATFLIFAACLFDLFDGRIARMRGQDG
PFGREFDSLADIVSFGIAPALLVAKAVLFQLSPPEVGWGIGILYLLCAALRLARFNCMAAAPRKEGQSSDFVGLPVPMAA
GAVVSTMYLVMYLAGRVPDGAMDLGVFKYVIALAMAGVSILMMSRVVYPSFKHINMRTRGTMYAIVFIVLAVICIFKFPW
VMPAVIFSIYLLYGLVRPWVARRWRNRLEARDGE
>Mature_274_residues
MDKKIFPDEPEIPILPNLFTAGNLVCGFFAILTIFEGINQADSDAVAAFSYYQNATFLIFAACLFDLFDGRIARMRGQDG
PFGREFDSLADIVSFGIAPALLVAKAVLFQLSPPEVGWGIGILYLLCAALRLARFNCMAAAPRKEGQSSDFVGLPVPMAA
GAVVSTMYLVMYLAGRVPDGAMDLGVFKYVIALAMAGVSILMMSRVVYPSFKHINMRTRGTMYAIVFIVLAVICIFKFPW
VMPAVIFSIYLLYGLVRPWVARRWRNRLEARDGE

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=178, Percent_Identity=35.3932584269663, Blast_Score=86, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 30256; Mature: 30256

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]