Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735865
Identifier: 187735865
GI number: 187735865
Start: 1638737
End: 1639426
Strand: Direct
Name: 187735865
Synonym: Amuc_1372
Alternate gene names: NA
Gene position: 1638737-1639426 (Clockwise)
Preceding gene: 187735864
Following gene: 187735866
Centisome position: 61.51
GC content: 51.3
Gene sequence:
>690_bases ATGATCGCTATGAATACGACTACAGCACTACTGGTAAACGCAGAACCCCTCTCCCGCGGCAACGGGAAAGGGGCGGATGT TGTGAATAATGGCAAGACGGCTAATCCTATCATTGCTCACAAGCCAGTAAGTACGACAGACGGGAAGCCCTGTCAACCGG CAAAGGCTGCCAGAACGGCCAAGAAGCCTGCCGCCCCCAGGAAGAAGCGGTACGATGAAGAGGATTTGATAGCCTTCGGA GAGAATGCTTTCATGCTCCGGGGCGCTGCAGAAGCCATTTTGGACATGTTCCATGCCTTGTTCTATGCCGATGACAACCA GGAAGAGGTTGTCAATGGCGTGAAGGGAGCCTTCGATGAGGCCGCCATTCTTCTGCAAAATGCAGCGAATGCGTTTGAAG AGAAGATTCCTTTCAAGGTTTTGGACAAGAGGCGGAAGACTTTTTTTGCCCTGACGGAAATAGATGAAAAAGACAGCGAT GTTCTTGCCGCGATTACTGCTATCAATTCCGGTTTTATCCAGTGGGATGAAGGAAGTGTTTACGTGAAGGCGACACGTTG CGAAATGGCAACTCTTCTGCTTAACCGCGCATTGGAAAGCGCCAAGAAGTCCTTCTACCTTGCCGAAGACTCAACATCAA ACCCCGCCCTTGCCGCAACGCTTGCTTCCATGAAAGGAGGGCACAGGTGA
Upstream 100 bases:
>100_bases CCTTGTGCGACGAAGACTAACGATTTCTTCACGCCTCTGTCCGGGGCGCGTCGATTGAACCTGATTAAATAATAATAGTT AATTGATAATAAATAAGATT
Downstream 100 bases:
>100_bases TGAAGGTTGTTACCCTGAAGATTCCCATCTCACAATCTATTTATGATACCGCCAAATTTGCGGTGGAAGAAGGGGTGGCG AGAAGCGAAGAAGAGTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MIAMNTTTALLVNAEPLSRGNGKGADVVNNGKTANPIIAHKPVSTTDGKPCQPAKAARTAKKPAAPRKKRYDEEDLIAFG ENAFMLRGAAEAILDMFHALFYADDNQEEVVNGVKGAFDEAAILLQNAANAFEEKIPFKVLDKRRKTFFALTEIDEKDSD VLAAITAINSGFIQWDEGSVYVKATRCEMATLLLNRALESAKKSFYLAEDSTSNPALAATLASMKGGHR
Sequences:
>Translated_229_residues MIAMNTTTALLVNAEPLSRGNGKGADVVNNGKTANPIIAHKPVSTTDGKPCQPAKAARTAKKPAAPRKKRYDEEDLIAFG ENAFMLRGAAEAILDMFHALFYADDNQEEVVNGVKGAFDEAAILLQNAANAFEEKIPFKVLDKRRKTFFALTEIDEKDSD VLAAITAINSGFIQWDEGSVYVKATRCEMATLLLNRALESAKKSFYLAEDSTSNPALAATLASMKGGHR >Mature_229_residues MIAMNTTTALLVNAEPLSRGNGKGADVVNNGKTANPIIAHKPVSTTDGKPCQPAKAARTAKKPAAPRKKRYDEEDLIAFG ENAFMLRGAAEAILDMFHALFYADDNQEEVVNGVKGAFDEAAILLQNAANAFEEKIPFKVLDKRRKTFFALTEIDEKDSD VLAAITAINSGFIQWDEGSVYVKATRCEMATLLLNRALESAKKSFYLAEDSTSNPALAATLASMKGGHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24753; Mature: 24753
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAMNTTTALLVNAEPLSRGNGKGADVVNNGKTANPIIAHKPVSTTDGKPCQPAKAARTA CEEECCEEEEEEECCCCCCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHH KKPAAPRKKRYDEEDLIAFGENAFMLRGAAEAILDMFHALFYADDNQEEVVNGVKGAFDE CCCCCCHHHCCCHHHHEEECCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHH AAILLQNAANAFEEKIPFKVLDKRRKTFFALTEIDEKDSDVLAAITAINSGFIQWDEGSV HHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCEEECCCCE YVKATRCEMATLLLNRALESAKKSFYLAEDSTSNPALAATLASMKGGHR EEEEHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MIAMNTTTALLVNAEPLSRGNGKGADVVNNGKTANPIIAHKPVSTTDGKPCQPAKAARTA CEEECCEEEEEEECCCCCCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHH KKPAAPRKKRYDEEDLIAFGENAFMLRGAAEAILDMFHALFYADDNQEEVVNGVKGAFDE CCCCCCHHHCCCHHHHEEECCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHH AAILLQNAANAFEEKIPFKVLDKRRKTFFALTEIDEKDSDVLAAITAINSGFIQWDEGSV HHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCEEECCCCE YVKATRCEMATLLLNRALESAKKSFYLAEDSTSNPALAATLASMKGGHR EEEEHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA