Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735852
Identifier: 187735852
GI number: 187735852
Start: 1631255
End: 1631533
Strand: Direct
Name: 187735852
Synonym: Amuc_1359
Alternate gene names: NA
Gene position: 1631255-1631533 (Clockwise)
Preceding gene: 187735851
Following gene: 187735853
Centisome position: 61.23
GC content: 54.84
Gene sequence:
>279_bases ATGACCGGATCTGTTGTCAACGCGGGCCTGCTGGGGGCTAATGCCCTGTCCGTGATTGCGTCCGTCACGTCAGGCAACCC CTTTTTGGAGTACATTCAAAACGGGGCCAGCGTGGCCGCGGTCATGGGAATTTTTCTGTGGCGGGAAATGAAACGGGCGG AACGTTATGAGCGGCTCTATGACGAGGAACGCAAAAAACGCATTGATGCGGAAAATAAATGTTCCGGCTGCGAGTTCACG CGCAAGGCGCATGAAGAATTCCTGGACAACAGGGACTAG
Upstream 100 bases:
>100_bases GGCTCCTGCCTCGTCATTGAGCAGGGACATATCTCCTATTCCCAGGCCCAGCCGGAAACGGACGTTCCGCCCGTTGTTCA ACCTCTGAAAAAGTGAAGCC
Downstream 100 bases:
>100_bases TTTCAACTGTAAAGTTTTTCTTACAAGTTCTAACCAGTTCTAACAGAAATAATTGATAACTATGAATCCTACAGAAAGAA AGATGGCTGCGGCCATCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MTGSVVNAGLLGANALSVIASVTSGNPFLEYIQNGASVAAVMGIFLWREMKRAERYERLYDEERKKRIDAENKCSGCEFT RKAHEEFLDNRD
Sequences:
>Translated_92_residues MTGSVVNAGLLGANALSVIASVTSGNPFLEYIQNGASVAAVMGIFLWREMKRAERYERLYDEERKKRIDAENKCSGCEFT RKAHEEFLDNRD >Mature_91_residues TGSVVNAGLLGANALSVIASVTSGNPFLEYIQNGASVAAVMGIFLWREMKRAERYERLYDEERKKRIDAENKCSGCEFTR KAHEEFLDNRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10347; Mature: 10216
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSVVNAGLLGANALSVIASVTSGNPFLEYIQNGASVAAVMGIFLWREMKRAERYERLY CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH DEERKKRIDAENKCSGCEFTRKAHEEFLDNRD HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TGSVVNAGLLGANALSVIASVTSGNPFLEYIQNGASVAAVMGIFLWREMKRAERYERLY CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH DEERKKRIDAENKCSGCEFTRKAHEEFLDNRD HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA