Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is phoU [H]
Identifier: 187735801
GI number: 187735801
Start: 1586871
End: 1587518
Strand: Direct
Name: phoU [H]
Synonym: Amuc_1308
Alternate gene names: 187735801
Gene position: 1586871-1587518 (Clockwise)
Preceding gene: 187735800
Following gene: 187735805
Centisome position: 59.56
GC content: 58.49
Gene sequence:
>648_bases ATGAATCACGACGCGCACACCCTGAGGGAGTTTGACGCCGCCCTTTCCTCCCTGAATACGCATTTGCTCCAGATGGCCTA TAAGGCGCAGAGCGCCCTTGATTTGGCCGCCGCCGGCCTTTTGCAGCAGAATGAGTCTTCCGCCAACCGGGTTATTGCTG ATGACGAAGAATTGGACGAGCTGGAAATGACGGTGGACAGGGAAGGGCTGCATCTGCTGGCTTTTTTCAGTCCGGTGGCT TCCGACCTCAAAGTGGTGCTGGCTTCCCTGCGCATGTCCTCCATGTATGAACGGATTGGTGATGAGGCCGTGACCATCGC CAAAAGGGCCAACAGGCTGAATAAGCGCCCGCGCATCCGGGAGGCTGCCTTGGCGGATCCTGTCTATCGGGAAATGGCGG AGCGGTTCAGGGCTGTGAATAAGGCTGTTTCCTCCTGGGACGGGGAGGCTCTGGCGGAGCTTGTCCCTGCGCTGGAGGAT TTGGCGGAGCATGCGGCGTCCCTGACGGAGGCATTTGCCTGCTTGCCTGAGCAATATCAGGACAATCTGGTTTCCGTTGC GGATCTGGTTTTTGTAAGCCGTTCCCTGGAACGCATCGCGGAAGGGCTCCAAAAGGTAGCTGCGGAAGGGCTTTACGCGG CCTCCTGA
Upstream 100 bases:
>100_bases CTGGCTGCCAGCGCCGCCAGAAAGAACAGCCTGCGCAGGCAGCATCTTTTTTATCATGCCGGCAAAACCTTATCCAATCA TCAAGCCAATATTCCGAATC
Downstream 100 bases:
>100_bases TGCCGCGTGCCTGCACAGGAAAGCCCGTTGCGGGCGTTGTCGAAGCGCCGTTTTTTGTTCGGAAACGGGATTCAGGCATG CCGCCTATCTGACAGTCCAG
Product: phosphate uptake regulator, PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNHDAHTLREFDAALSSLNTHLLQMAYKAQSALDLAAAGLLQQNESSANRVIADDEELDELEMTVDREGLHLLAFFSPVA SDLKVVLASLRMSSMYERIGDEAVTIAKRANRLNKRPRIREAALADPVYREMAERFRAVNKAVSSWDGEALAELVPALED LAEHAASLTEAFACLPEQYQDNLVSVADLVFVSRSLERIAEGLQKVAAEGLYAAS
Sequences:
>Translated_215_residues MNHDAHTLREFDAALSSLNTHLLQMAYKAQSALDLAAAGLLQQNESSANRVIADDEELDELEMTVDREGLHLLAFFSPVA SDLKVVLASLRMSSMYERIGDEAVTIAKRANRLNKRPRIREAALADPVYREMAERFRAVNKAVSSWDGEALAELVPALED LAEHAASLTEAFACLPEQYQDNLVSVADLVFVSRSLERIAEGLQKVAAEGLYAAS >Mature_215_residues MNHDAHTLREFDAALSSLNTHLLQMAYKAQSALDLAAAGLLQQNESSANRVIADDEELDELEMTVDREGLHLLAFFSPVA SDLKVVLASLRMSSMYERIGDEAVTIAKRANRLNKRPRIREAALADPVYREMAERFRAVNKAVSSWDGEALAELVPALED LAEHAASLTEAFACLPEQYQDNLVSVADLVFVSRSLERIAEGLQKVAAEGLYAAS
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 23615; Mature: 23615
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHDAHTLREFDAALSSLNTHLLQMAYKAQSALDLAAAGLLQQNESSANRVIADDEELDE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH LEMTVDREGLHLLAFFSPVASDLKVVLASLRMSSMYERIGDEAVTIAKRANRLNKRPRIR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHH EAALADPVYREMAERFRAVNKAVSSWDGEALAELVPALEDLAEHAASLTEAFACLPEQYQ HHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH DNLVSVADLVFVSRSLERIAEGLQKVAAEGLYAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNHDAHTLREFDAALSSLNTHLLQMAYKAQSALDLAAAGLLQQNESSANRVIADDEELDE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH LEMTVDREGLHLLAFFSPVASDLKVVLASLRMSSMYERIGDEAVTIAKRANRLNKRPRIR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHH EAALADPVYREMAERFRAVNKAVSSWDGEALAELVPALEDLAEHAASLTEAFACLPEQYQ HHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH DNLVSVADLVFVSRSLERIAEGLQKVAAEGLYAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]