Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735753
Identifier: 187735753
GI number: 187735753
Start: 1518353
End: 1520530
Strand: Direct
Name: 187735753
Synonym: Amuc_1259
Alternate gene names: NA
Gene position: 1518353-1520530 (Clockwise)
Preceding gene: 187735747
Following gene: 187735754
Centisome position: 56.99
GC content: 51.97
Gene sequence:
>2178_bases ATGATGCTGTGTTGTGCGGGAGCGGGGATGCGGCTTCATGCCCAGCCTTTGAATAAGGGCCGGATTGCCATTCTGGGTGA TAGTATTGCTTACGCGGGCCATTGGGCCAATGAAGTGGAAAACACCTTGAGGGATGATAAAAAATTTGCAGCCTGCGAGA TTGTCAACTTTGCCGTTCCCAGCGAGACGGTAGCCGGGTTGAGCGAATATGGCCATGCGGGCGGCAGATTCCCCCGTCCA TGCCTGCATGAGCGCCTCAGCCGGATTCTCAAGATGTACCAGCCTCAATTGATTCTGGCCTGCTACGGGATGAATGACGG CCTCATGCAGGCGTTTGACAAAGCGCGTTTTCAAGCGTACCAGGAAGGGAATATCCGCCTTAAAAAGGCTGCCGATGCGG TAAAAGCGGAGATTGTCTTCATTACTCCTCCATTGTTCCGGGGGGATTCCGCTGAACAGGCTGAGTACGACGCTGTATTG GACAAGTACGCGGAATGGCTGGTTTCTAAAAGAAAAGACGGCTGGAAAGTCATAGATATCCGTCCCGGGCTTCGGAAACT CATTGCCAGAGAGAAGGCAGGGAATCCCGGTTTCAGGTATTCCGGTGACGGCGTGCACCCCGGCCCGGAAGGGCACCATA TGATAGCCCGGGAAGTTCTTGCCGGGCTGGTCCCGGAAATAGGCCTTGCTCCTGAGGTTGCGGAAAAAGACCATCGGCCG ACGCCGGATACGATGAAAAAACATGAGAAAGTCCGCAATGAATGGCTGGTAAAAACAGGACATGCACGGCCGGAAATTCC GGGGTATGATCCGGAAATGGCCAAGCGTCAGTTCCCTAGGACGGTTTCTGTCTGGAATGGTTTTTTACGGGAGGAGTTTG CCGTGGGCGGCCGCAGGGCATTCATCGTCTTTCCCGACAAGGCTGTTGTTTCTGGAAAAGAACAGTTGTGGATATGGCGG CCGCAATTTTTTGATTATAAGCCTATAGCAGATCTCGAACTGGTAAAGCGCGGTTATGCGGCGGTATTTATCAGCATGGA AGACCTTTACGGTTCTCCCAAGGCCATGGATGTGATGGATCAATTTTACAGGTATCTGGTGGATGAACGCGGTTTTTCCA GAAAAACGGTGTTGTTTGGACTGAGCCGTGGAGGCCTTTATGCGCTTAACTGGGCGGAGAAGAATCCTTTGTGCGTGGCT GGCGTTTATGTGGATGCCCCCGTCTGTGATTTCAAAAGCTGGCCGGCGGGCAGGGGCAAGGGCAAAGGTTCGCCGGATGA CTGGAACAAATGCCTGCGCGCCTACGGCTTTAATGAACAGCAGGCTTTGTCCTATAAGGGTAACCCCGTGGACAATATGC GCGGCATGGCTAAAGCCGGAATTCCTTTGTTGTTTATTTCCCGGACGGAAGATGACGTAGTCCCTATTGAAGAGAATACG GATGTTTTCGCTAAGCGTTACGCCGGGATGGGGGGGCCTGTAAGAGTCATCCGCCGGTCCGGAGGGCATCATCCGCACGG TTTTGACAATCCTGCCCATATCGTAGATTTTGTTCTTTCCGTTACCGGACAGCCCGTCCCCTTGCGCGTTGCGTGCCTGG GAGACAGTAATACTTTTGGAGCAGGAGTAGCCGGAGCCAATAAGGATGTTTTGCGCTGGAGCCATCTTCTTGGTCAGGAA TTGAGGGAAAAATTCAAACGGAAAGAAATAGAAGTGCTGAACTGCGGCGTTAACGGGCGTACCCTTCTGGCCAAGGGAGA CCTTCCCTATATTAAAACGGGCGAGTACCGGAATGCGCTCAATTCCCATGCACAGATTGCCATTATCGCGTTAGGCACCA ATGACGCCAAACCGCAGAACAGGAAATTCCTGTCCGAGTTTAAGCAGAATTATGCCGCCATCATCGCCGAACTGCGGGAA AACATGCCCGGTATTCAAATCTATTGCGCAATTCCGCTTCCCTCGTGGCAGTCTTCCAGCCAAATTGACAAGGAAACGGT GAAAAATAAAATTGTCCCTCTTGTGAAGCAGGTTGCGAAGGACAATAATTGTAAAACCATCGACTTTTTCACCCCTTTTC AAGATAAACCGGAACTTTTTCCCGATGGCGTTCATCCCAATGCCGATGGGCAGGTGATTATGGCTGATGCTGCGCTCAAG GAACTTCTGAAGAAGTAG
Upstream 100 bases:
>100_bases CCCGTATCTTGCAAGAAATTTATTTCGTTTTCAGTAGTAATAAGTACAACCATATTATTGTGAAATGCGTTTTCTGTTAA TAGCAAGATGTTTATTGTTG
Downstream 100 bases:
>100_bases TTTTTTAATTTAATCAATACGGAATAAATGAACGCCAGACTATCGGCAATCACAGGTTCGATTCTCCTGCTGTCGTCCCC GCTGCAGGGATTTTCCGCAA
Product: lipolytic protein G-D-S-L family
Products: NA
Alternate protein names: Xylanase; Lipolytic Protein G-D-S-L Family; O-Antigen Related Protein; Esterase; Lipolytic; Signal Peptide; O-Antigen-Like Protein; Lipase/Acylhydrolase GDSL Family; GDSL-Like Protein; Acetylesterase/GDSL-Like Lipase/Acylhydrolase; Alpha/Beta Hydrolase Fold-3 Domain Protein
Number of amino acids: Translated: 725; Mature: 725
Protein sequence:
>725_residues MMLCCAGAGMRLHAQPLNKGRIAILGDSIAYAGHWANEVENTLRDDKKFAACEIVNFAVPSETVAGLSEYGHAGGRFPRP CLHERLSRILKMYQPQLILACYGMNDGLMQAFDKARFQAYQEGNIRLKKAADAVKAEIVFITPPLFRGDSAEQAEYDAVL DKYAEWLVSKRKDGWKVIDIRPGLRKLIAREKAGNPGFRYSGDGVHPGPEGHHMIAREVLAGLVPEIGLAPEVAEKDHRP TPDTMKKHEKVRNEWLVKTGHARPEIPGYDPEMAKRQFPRTVSVWNGFLREEFAVGGRRAFIVFPDKAVVSGKEQLWIWR PQFFDYKPIADLELVKRGYAAVFISMEDLYGSPKAMDVMDQFYRYLVDERGFSRKTVLFGLSRGGLYALNWAEKNPLCVA GVYVDAPVCDFKSWPAGRGKGKGSPDDWNKCLRAYGFNEQQALSYKGNPVDNMRGMAKAGIPLLFISRTEDDVVPIEENT DVFAKRYAGMGGPVRVIRRSGGHHPHGFDNPAHIVDFVLSVTGQPVPLRVACLGDSNTFGAGVAGANKDVLRWSHLLGQE LREKFKRKEIEVLNCGVNGRTLLAKGDLPYIKTGEYRNALNSHAQIAIIALGTNDAKPQNRKFLSEFKQNYAAIIAELRE NMPGIQIYCAIPLPSWQSSSQIDKETVKNKIVPLVKQVAKDNNCKTIDFFTPFQDKPELFPDGVHPNADGQVIMADAALK ELLKK
Sequences:
>Translated_725_residues MMLCCAGAGMRLHAQPLNKGRIAILGDSIAYAGHWANEVENTLRDDKKFAACEIVNFAVPSETVAGLSEYGHAGGRFPRP CLHERLSRILKMYQPQLILACYGMNDGLMQAFDKARFQAYQEGNIRLKKAADAVKAEIVFITPPLFRGDSAEQAEYDAVL DKYAEWLVSKRKDGWKVIDIRPGLRKLIAREKAGNPGFRYSGDGVHPGPEGHHMIAREVLAGLVPEIGLAPEVAEKDHRP TPDTMKKHEKVRNEWLVKTGHARPEIPGYDPEMAKRQFPRTVSVWNGFLREEFAVGGRRAFIVFPDKAVVSGKEQLWIWR PQFFDYKPIADLELVKRGYAAVFISMEDLYGSPKAMDVMDQFYRYLVDERGFSRKTVLFGLSRGGLYALNWAEKNPLCVA GVYVDAPVCDFKSWPAGRGKGKGSPDDWNKCLRAYGFNEQQALSYKGNPVDNMRGMAKAGIPLLFISRTEDDVVPIEENT DVFAKRYAGMGGPVRVIRRSGGHHPHGFDNPAHIVDFVLSVTGQPVPLRVACLGDSNTFGAGVAGANKDVLRWSHLLGQE LREKFKRKEIEVLNCGVNGRTLLAKGDLPYIKTGEYRNALNSHAQIAIIALGTNDAKPQNRKFLSEFKQNYAAIIAELRE NMPGIQIYCAIPLPSWQSSSQIDKETVKNKIVPLVKQVAKDNNCKTIDFFTPFQDKPELFPDGVHPNADGQVIMADAALK ELLKK >Mature_725_residues MMLCCAGAGMRLHAQPLNKGRIAILGDSIAYAGHWANEVENTLRDDKKFAACEIVNFAVPSETVAGLSEYGHAGGRFPRP CLHERLSRILKMYQPQLILACYGMNDGLMQAFDKARFQAYQEGNIRLKKAADAVKAEIVFITPPLFRGDSAEQAEYDAVL DKYAEWLVSKRKDGWKVIDIRPGLRKLIAREKAGNPGFRYSGDGVHPGPEGHHMIAREVLAGLVPEIGLAPEVAEKDHRP TPDTMKKHEKVRNEWLVKTGHARPEIPGYDPEMAKRQFPRTVSVWNGFLREEFAVGGRRAFIVFPDKAVVSGKEQLWIWR PQFFDYKPIADLELVKRGYAAVFISMEDLYGSPKAMDVMDQFYRYLVDERGFSRKTVLFGLSRGGLYALNWAEKNPLCVA GVYVDAPVCDFKSWPAGRGKGKGSPDDWNKCLRAYGFNEQQALSYKGNPVDNMRGMAKAGIPLLFISRTEDDVVPIEENT DVFAKRYAGMGGPVRVIRRSGGHHPHGFDNPAHIVDFVLSVTGQPVPLRVACLGDSNTFGAGVAGANKDVLRWSHLLGQE LREKFKRKEIEVLNCGVNGRTLLAKGDLPYIKTGEYRNALNSHAQIAIIALGTNDAKPQNRKFLSEFKQNYAAIIAELRE NMPGIQIYCAIPLPSWQSSSQIDKETVKNKIVPLVKQVAKDNNCKTIDFFTPFQDKPELFPDGVHPNADGQVIMADAALK ELLKK
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80841; Mature: 80841
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLCCAGAGMRLHAQPLNKGRIAILGDSIAYAGHWANEVENTLRDDKKFAACEIVNFAVP CEEEECCCCCEEEECCCCCCCEEEEECCHHHCCCCHHHHHHHHHHCCHHHHHEEEEECCC SETVAGLSEYGHAGGRFPRPCLHERLSRILKMYQPQLILACYGMNDGLMQAFDKARFQAY CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHH QEGNIRLKKAADAVKAEIVFITPPLFRGDSAEQAEYDAVLDKYAEWLVSKRKDGWKVIDI HCCCEEEEEHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE RPGLRKLIAREKAGNPGFRYSGDGVHPGPEGHHMIAREVLAGLVPEIGLAPEVAEKDHRP CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCC TPDTMKKHEKVRNEWLVKTGHARPEIPGYDPEMAKRQFPRTVSVWNGFLREEFAVGGRRA CCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEE FIVFPDKAVVSGKEQLWIWRPQFFDYKPIADLELVKRGYAAVFISMEDLYGSPKAMDVMD EEEECCHHHHCCCCEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEHHHHCCCCHHHHHHH QFYRYLVDERGFSRKTVLFGLSRGGLYALNWAEKNPLCVAGVYVDAPVCDFKSWPAGRGK HHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCC GKGSPDDWNKCLRAYGFNEQQALSYKGNPVDNMRGMAKAGIPLLFISRTEDDVVPIEENT CCCCCHHHHHHHHHCCCCCHHEECCCCCCHHHHHHHHHCCCCEEEEECCCCCEECCCCCC DVFAKRYAGMGGPVRVIRRSGGHHPHGFDNPAHIVDFVLSVTGQPVPLRVACLGDSNTFG HHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCC AGVAGANKDVLRWSHLLGQELREKFKRKEIEVLNCGVNGRTLLAKGDLPYIKTGEYRNAL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCEECCHHHHHH NSHAQIAIIALGTNDAKPQNRKFLSEFKQNYAAIIAELRENMPGIQIYCAIPLPSWQSSS CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC QIDKETVKNKIVPLVKQVAKDNNCKTIDFFTPFQDKPELFPDGVHPNADGQVIMADAALK HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEHHHHH ELLKK HHHHC >Mature Secondary Structure MMLCCAGAGMRLHAQPLNKGRIAILGDSIAYAGHWANEVENTLRDDKKFAACEIVNFAVP CEEEECCCCCEEEECCCCCCCEEEEECCHHHCCCCHHHHHHHHHHCCHHHHHEEEEECCC SETVAGLSEYGHAGGRFPRPCLHERLSRILKMYQPQLILACYGMNDGLMQAFDKARFQAY CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHH QEGNIRLKKAADAVKAEIVFITPPLFRGDSAEQAEYDAVLDKYAEWLVSKRKDGWKVIDI HCCCEEEEEHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE RPGLRKLIAREKAGNPGFRYSGDGVHPGPEGHHMIAREVLAGLVPEIGLAPEVAEKDHRP CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCC TPDTMKKHEKVRNEWLVKTGHARPEIPGYDPEMAKRQFPRTVSVWNGFLREEFAVGGRRA CCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEE FIVFPDKAVVSGKEQLWIWRPQFFDYKPIADLELVKRGYAAVFISMEDLYGSPKAMDVMD EEEECCHHHHCCCCEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEHHHHCCCCHHHHHHH QFYRYLVDERGFSRKTVLFGLSRGGLYALNWAEKNPLCVAGVYVDAPVCDFKSWPAGRGK HHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCC GKGSPDDWNKCLRAYGFNEQQALSYKGNPVDNMRGMAKAGIPLLFISRTEDDVVPIEENT CCCCCHHHHHHHHHCCCCCHHEECCCCCCHHHHHHHHHCCCCEEEEECCCCCEECCCCCC DVFAKRYAGMGGPVRVIRRSGGHHPHGFDNPAHIVDFVLSVTGQPVPLRVACLGDSNTFG HHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCC AGVAGANKDVLRWSHLLGQELREKFKRKEIEVLNCGVNGRTLLAKGDLPYIKTGEYRNAL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCEECCHHHHHH NSHAQIAIIALGTNDAKPQNRKFLSEFKQNYAAIIAELRENMPGIQIYCAIPLPSWQSSS CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC QIDKETVKNKIVPLVKQVAKDNNCKTIDFFTPFQDKPELFPDGVHPNADGQVIMADAALK HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEHHHHH ELLKK HHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA