Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735751
Identifier: 187735751
GI number: 187735751
Start: 1515436
End: 1515621
Strand: Reverse
Name: 187735751
Synonym: Amuc_1257
Alternate gene names: NA
Gene position: 1515621-1515436 (Counterclockwise)
Preceding gene: 187735752
Following gene: 187735750
Centisome position: 56.89
GC content: 60.22
Gene sequence:
>186_bases ATGAGCAAGAGGACTTATCAACCATCCAAGCGTTGCCGCAAGCGTCAGTTCGGATTCCGTGCACGCATGGCCACCAAGAA CGGAGCGGACATCATCCGCCGCCGCCGCGCTAAAGGCCGCAAGCGCCTGCTTCCCAAGGGAGCCGAAATCCAGTACAAGC GCCACACCATCCAGCACGGCCGTTAA
Upstream 100 bases:
>100_bases AAAACAATCAAAATAGTTATCCTTTCCGTCCGGTTGTGCATAGGCCGCTTAGACGGACGGCACTGAATCTAGTAATTCAC AAGAAGCATCTTTCAACATC
Downstream 100 bases:
>100_bases TCCAGCCGCCAGGATCCGGTTAACGCCTCCTTGGAACTTCTTTTCACGGGCCGACCCGCGGGAGATGCGTCTTACTCGTC AACAAAGCATGACCAGGGCA
Product: ribosomal protein L34
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MSKRTYQPSKRCRKRQFGFRARMATKNGADIIRRRRAKGRKRLLPKGAEIQYKRHTIQHGR
Sequences:
>Translated_61_residues MSKRTYQPSKRCRKRQFGFRARMATKNGADIIRRRRAKGRKRLLPKGAEIQYKRHTIQHGR >Mature_60_residues SKRTYQPSKRCRKRQFGFRARMATKNGADIIRRRRAKGRKRLLPKGAEIQYKRHTIQHGR
Specific function: Unknown
COG id: COG0230
COG function: function code J; Ribosomal protein L34
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7353; Mature: 7222
Theoretical pI: Translated: 12.64; Mature: 12.64
Prosite motif: PS00784 RIBOSOMAL_L34
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRTYQPSKRCRKRQFGFRARMATKNGADIIRRRRAKGRKRLLPKGAEIQYKRHTIQHG CCCCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC R C >Mature Secondary Structure SKRTYQPSKRCRKRQFGFRARMATKNGADIIRRRRAKGRKRLLPKGAEIQYKRHTIQHG CCCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA