Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735751

Identifier: 187735751

GI number: 187735751

Start: 1515436

End: 1515621

Strand: Reverse

Name: 187735751

Synonym: Amuc_1257

Alternate gene names: NA

Gene position: 1515621-1515436 (Counterclockwise)

Preceding gene: 187735752

Following gene: 187735750

Centisome position: 56.89

GC content: 60.22

Gene sequence:

>186_bases
ATGAGCAAGAGGACTTATCAACCATCCAAGCGTTGCCGCAAGCGTCAGTTCGGATTCCGTGCACGCATGGCCACCAAGAA
CGGAGCGGACATCATCCGCCGCCGCCGCGCTAAAGGCCGCAAGCGCCTGCTTCCCAAGGGAGCCGAAATCCAGTACAAGC
GCCACACCATCCAGCACGGCCGTTAA

Upstream 100 bases:

>100_bases
AAAACAATCAAAATAGTTATCCTTTCCGTCCGGTTGTGCATAGGCCGCTTAGACGGACGGCACTGAATCTAGTAATTCAC
AAGAAGCATCTTTCAACATC

Downstream 100 bases:

>100_bases
TCCAGCCGCCAGGATCCGGTTAACGCCTCCTTGGAACTTCTTTTCACGGGCCGACCCGCGGGAGATGCGTCTTACTCGTC
AACAAAGCATGACCAGGGCA

Product: ribosomal protein L34

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MSKRTYQPSKRCRKRQFGFRARMATKNGADIIRRRRAKGRKRLLPKGAEIQYKRHTIQHGR

Sequences:

>Translated_61_residues
MSKRTYQPSKRCRKRQFGFRARMATKNGADIIRRRRAKGRKRLLPKGAEIQYKRHTIQHGR
>Mature_60_residues
SKRTYQPSKRCRKRQFGFRARMATKNGADIIRRRRAKGRKRLLPKGAEIQYKRHTIQHGR

Specific function: Unknown

COG id: COG0230

COG function: function code J; Ribosomal protein L34

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7353; Mature: 7222

Theoretical pI: Translated: 12.64; Mature: 12.64

Prosite motif: PS00784 RIBOSOMAL_L34

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRTYQPSKRCRKRQFGFRARMATKNGADIIRRRRAKGRKRLLPKGAEIQYKRHTIQHG
CCCCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC
R
C
>Mature Secondary Structure 
SKRTYQPSKRCRKRQFGFRARMATKNGADIIRRRRAKGRKRLLPKGAEIQYKRHTIQHG
CCCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA