Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735709
Identifier: 187735709
GI number: 187735709
Start: 1454296
End: 1455000
Strand: Reverse
Name: 187735709
Synonym: Amuc_1215
Alternate gene names: NA
Gene position: 1455000-1454296 (Counterclockwise)
Preceding gene: 187735710
Following gene: 187735708
Centisome position: 54.62
GC content: 59.15
Gene sequence:
>705_bases ATGGCCAACATCTTTCCACCCAATACCAACAAGCGCTTTTACGGGATTGCCGCCCTGGTTGCGCTCGCTGCCGCGTTCGT ACTGGGGGGAATATATTATGTTAATTTCAGCATTCCGGAGTATGAACCCGTGCAGCCCGTCCGCTTTTCCCACAAACTTC ACGCCGGAGATCTGAAGATGAGCTGCACGGCTTGCCACAGCGCCGCACAGCGCTCATCCAGAGCCGGCATTCCGGATACG AAGTCCTGTCTGGGCTGCCACCAGCATATTCTTCCGGACAGCCCGCTCATCGCCCCCCTGAGGGAGGCGGCGGACCCGCA ATACCCCGGTTACACAGGAGAACCGGTCCGCTGGGTGATGGTCAACCGCCTGTCCGGTCACGCCTATTTTAACCACATGG CCCACCTGAACCGGGGCATCGGCTGCACGTCCTGCCATGGAGACGTGGCGGGCATGGAACGCATCAGGGCTCCACGCGAT GCCCGCATGCAATGGTGTCTGGACTGCCACCGCAATCCGGCTCCCCATCTGCGCCCGCTGGAGGAAACGGCCAGTTCCCG TTATTCCGCCGCAGACTACCTCCGCACGCATTCCATCCGGGATGGAGAAGGGAAAAGCATCCAAACCCCGCTTCAACTGG GAAATTTTCTGAAACGCCAATGGAAAATTCAACCGAAGACGGATTGCACCGCATGCCATCACTGA
Upstream 100 bases:
>100_bases CCTGAAGACCTGACGATGGATACGCCCCTGCCGCCCGCCCGCATCCCGCGCCCGGGCAGAACGGCCTGACGGAGGCTCCA TCCCTTTCTCTCTACGGTTC
Downstream 100 bases:
>100_bases CCTCCATGGCCTGTTTGACATCCGCGGCGCCAAAGTTATTCCTCCCTGCGTTCCCGGATACTGCGTAATAAAAAGACCAA AGGACTTTTCATTAAATGAT
Product: cytochrome c
Products: NA
Alternate protein names: Cytochrome C Family Protein; Cytochrome C; Cytochrome C Class I; Cytochrome C Domain-Containing Protein; Cytochrome C Mono- And Diheme Variant; Molybdopterin Oxidoreductase Subunit; Multiheme Cytochrome Domain Protein; Lipoprotein Cytochrome C
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MANIFPPNTNKRFYGIAALVALAAAFVLGGIYYVNFSIPEYEPVQPVRFSHKLHAGDLKMSCTACHSAAQRSSRAGIPDT KSCLGCHQHILPDSPLIAPLREAADPQYPGYTGEPVRWVMVNRLSGHAYFNHMAHLNRGIGCTSCHGDVAGMERIRAPRD ARMQWCLDCHRNPAPHLRPLEETASSRYSAADYLRTHSIRDGEGKSIQTPLQLGNFLKRQWKIQPKTDCTACHH
Sequences:
>Translated_234_residues MANIFPPNTNKRFYGIAALVALAAAFVLGGIYYVNFSIPEYEPVQPVRFSHKLHAGDLKMSCTACHSAAQRSSRAGIPDT KSCLGCHQHILPDSPLIAPLREAADPQYPGYTGEPVRWVMVNRLSGHAYFNHMAHLNRGIGCTSCHGDVAGMERIRAPRD ARMQWCLDCHRNPAPHLRPLEETASSRYSAADYLRTHSIRDGEGKSIQTPLQLGNFLKRQWKIQPKTDCTACHH >Mature_233_residues ANIFPPNTNKRFYGIAALVALAAAFVLGGIYYVNFSIPEYEPVQPVRFSHKLHAGDLKMSCTACHSAAQRSSRAGIPDTK SCLGCHQHILPDSPLIAPLREAADPQYPGYTGEPVRWVMVNRLSGHAYFNHMAHLNRGIGCTSCHGDVAGMERIRAPRDA RMQWCLDCHRNPAPHLRPLEETASSRYSAADYLRTHSIRDGEGKSIQTPLQLGNFLKRQWKIQPKTDCTACHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26057; Mature: 25926
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIFPPNTNKRFYGIAALVALAAAFVLGGIYYVNFSIPEYEPVQPVRFSHKLHAGDLKM CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHCCEECCCCCCH SCTACHSAAQRSSRAGIPDTKSCLGCHQHILPDSPLIAPLREAADPQYPGYTGEPVRWVM HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEE VNRLSGHAYFNHMAHLNRGIGCTSCHGDVAGMERIRAPRDARMQWCLDCHRNPAPHLRPL EEHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCH EETASSRYSAADYLRTHSIRDGEGKSIQTPLQLGNFLKRQWKIQPKTDCTACHH HHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ANIFPPNTNKRFYGIAALVALAAAFVLGGIYYVNFSIPEYEPVQPVRFSHKLHAGDLKM CCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHCCEECCCCCCH SCTACHSAAQRSSRAGIPDTKSCLGCHQHILPDSPLIAPLREAADPQYPGYTGEPVRWVM HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEE VNRLSGHAYFNHMAHLNRGIGCTSCHGDVAGMERIRAPRDARMQWCLDCHRNPAPHLRPL EEHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCH EETASSRYSAADYLRTHSIRDGEGKSIQTPLQLGNFLKRQWKIQPKTDCTACHH HHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA