Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735682

Identifier: 187735682

GI number: 187735682

Start: 1425003

End: 1425227

Strand: Reverse

Name: 187735682

Synonym: Amuc_1188

Alternate gene names: NA

Gene position: 1425227-1425003 (Counterclockwise)

Preceding gene: 187735683

Following gene: 187735678

Centisome position: 53.5

GC content: 53.78

Gene sequence:

>225_bases
ATGAAAGCCCAAACCAAAATCGCTCTTAGAATTAATGATGACAACCCCAACCACCACCTGTGGAACAACAGGGGGGTTTG
GTGGTGCCACGTTACGGTTCACAAGCCGGACTCCACGGCGGAACGCCTGAGATTCTCGCTGAAAACCCGTGACATTGAAA
AAGCCCGCGCCCGTCGCGACAAGATTTTCGCCTCCATTCAGCAGCATTTCGGCATTGCCGCCTAG

Upstream 100 bases:

>100_bases
ATCTGCTTAAGTGAGGCACCTCCAAGTTGAAGGTTTTATTGAAACATTAATATGCCAACGGACGTAAACAATACGTCCTC
TACTGGAAAAGATCACACAG

Downstream 100 bases:

>100_bases
AAAAGCTGTCGGGAGAGATTAAGGCAAGTCACATCAATCTCTTTTATAAGAACCGCTCCGGATCTGCCGGAGCGGTTTTT
TATTACACAATAACAAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MKAQTKIALRINDDNPNHHLWNNRGVWWCHVTVHKPDSTAERLRFSLKTRDIEKARARRDKIFASIQQHFGIAA

Sequences:

>Translated_74_residues
MKAQTKIALRINDDNPNHHLWNNRGVWWCHVTVHKPDSTAERLRFSLKTRDIEKARARRDKIFASIQQHFGIAA
>Mature_74_residues
MKAQTKIALRINDDNPNHHLWNNRGVWWCHVTVHKPDSTAERLRFSLKTRDIEKARARRDKIFASIQQHFGIAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8717; Mature: 8717

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAQTKIALRINDDNPNHHLWNNRGVWWCHVTVHKPDSTAERLRFSLKTRDIEKARARRD
CCCCCEEEEEECCCCCCCCEECCCCEEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHH
KIFASIQQHFGIAA
HHHHHHHHHCCCCC
>Mature Secondary Structure
MKAQTKIALRINDDNPNHHLWNNRGVWWCHVTVHKPDSTAERLRFSLKTRDIEKARARRD
CCCCCEEEEEECCCCCCCCEECCCCEEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHH
KIFASIQQHFGIAA
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA