Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yxaH [H]

Identifier: 187735665

GI number: 187735665

Start: 1406676

End: 1407860

Strand: Direct

Name: yxaH [H]

Synonym: Amuc_1171

Alternate gene names: 187735665

Gene position: 1406676-1407860 (Clockwise)

Preceding gene: 187735657

Following gene: 187735666

Centisome position: 52.8

GC content: 57.47

Gene sequence:

>1185_bases
ATGCCTTCCGTATATCCCCCCGGCAACGAACGCATTTACGTGGTGGACGCTCTGCGCGGCTTTGCCGTAATGGCGATCAT
GCTGCTGCATTTTCTTGAACATTTCATCTATAATTCCTATCCCGTGGCTTCTTCCCCAATGATGGAAGCGGCCAACCAGC
AGTTCAAGGAGGTCTTTTTTTTCCTGTTTGCCGGCAAGTCCTACACCATTTTCGCCCTTCTGTTCGGATTCACTTTTGCG
GTCCAGTACCGTAACCAGGCCCGGAAGGGAAGGGATTTTGCGGGCAGGTTTGTCTGGCGCATGTGCCTGCTGGCGGTGTT
CGCCTGCATGAATGCAGCGTTTTTCCCGGGCGGTGATGTTCTGCTGACTTTTTCACTTGCAGGTTTGTTGCTGGTGCCGT
GCCGCCGGTTGAAGACATCCTCGCTGGTGGCTTTGTCCCTGTTTTTCCTGGCCCAGCCGCTGGAGTGGGCCTATGCGGCG
GTGCAGTGGATGCATCCGGGTTGGGTTCCTCCCTCCCTGTCTGTTGCGGAATCGTACGCTTCCTTAAAATCCGCCGTGGA
TACGGGAAATTTCTGGGTGATGGCCTGGGAGAACCTGACTACAGGACAATGGGCCAGCCTGGCATGGGGTATTGAAGCCG
GGCGTTTGATGCAGGCTCCGGGTCTGTTCCTGCTGGGGTTTGTTCTGGGGCGCCAGGATTTCTTTTTGCAGAATGACGGA
ACGGCTGTGTTCTGGACCCGCGGACTGCTATTTTCCCTGGCCGGGGCCTGTGCATTTTACGTGGTGATGTGCCTGCCGGG
GCTGCCGGGGCCTGTGCATACCGTGTTTAGCATGTGGCACAATGTTTGCTTTACCGGCGTATGGGTGGCCGGGTTCGTTC
TGTTGTACCGGCTGGAATATTTCAGGAAAGCGACGGCTCCGTTGCTGACCTACGGGCGCATGAGCCTGACCAACTATGTT
TCCCAGTCCGTGATCGGCTCCCTGATTTTTTTCCCGTATGCACTGGGGCTAGCTCCCTACTGCGGGTATCTGGCCAGTTT
TGTGGTCGGCTTTGCCGCCATGACCGGACAGATATGGTTCTGCCGCTGGTGGCTGGAGCGGCACCGCTACGGGGTGCTGG
AAGGATTGTGGCACCGGGCGACATGGCTGGCCGCCGGGAAGGTTTCCGCTCCGGAACACCGGTAA

Upstream 100 bases:

>100_bases
GAAGAGAAAATACCCTGCGGGGTTTGAGTGGTAAATGGAATTGCCGCAATATATGTTCCATCTGTTGAAAAAAGAAGGCT
TCCTGGCATGTATTATTGTC

Downstream 100 bases:

>100_bases
GAAACGGGGGCCGGCGCAATGATGTTTCCCGATACTTGCGGGACGCTTTTTAGCGTCTTCTGCCAAAGCCGGTGATTTAT
CCGGACGGAGGATGCATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MPSVYPPGNERIYVVDALRGFAVMAIMLLHFLEHFIYNSYPVASSPMMEAANQQFKEVFFFLFAGKSYTIFALLFGFTFA
VQYRNQARKGRDFAGRFVWRMCLLAVFACMNAAFFPGGDVLLTFSLAGLLLVPCRRLKTSSLVALSLFFLAQPLEWAYAA
VQWMHPGWVPPSLSVAESYASLKSAVDTGNFWVMAWENLTTGQWASLAWGIEAGRLMQAPGLFLLGFVLGRQDFFLQNDG
TAVFWTRGLLFSLAGACAFYVVMCLPGLPGPVHTVFSMWHNVCFTGVWVAGFVLLYRLEYFRKATAPLLTYGRMSLTNYV
SQSVIGSLIFFPYALGLAPYCGYLASFVVGFAAMTGQIWFCRWWLERHRYGVLEGLWHRATWLAAGKVSAPEHR

Sequences:

>Translated_394_residues
MPSVYPPGNERIYVVDALRGFAVMAIMLLHFLEHFIYNSYPVASSPMMEAANQQFKEVFFFLFAGKSYTIFALLFGFTFA
VQYRNQARKGRDFAGRFVWRMCLLAVFACMNAAFFPGGDVLLTFSLAGLLLVPCRRLKTSSLVALSLFFLAQPLEWAYAA
VQWMHPGWVPPSLSVAESYASLKSAVDTGNFWVMAWENLTTGQWASLAWGIEAGRLMQAPGLFLLGFVLGRQDFFLQNDG
TAVFWTRGLLFSLAGACAFYVVMCLPGLPGPVHTVFSMWHNVCFTGVWVAGFVLLYRLEYFRKATAPLLTYGRMSLTNYV
SQSVIGSLIFFPYALGLAPYCGYLASFVVGFAAMTGQIWFCRWWLERHRYGVLEGLWHRATWLAAGKVSAPEHR
>Mature_393_residues
PSVYPPGNERIYVVDALRGFAVMAIMLLHFLEHFIYNSYPVASSPMMEAANQQFKEVFFFLFAGKSYTIFALLFGFTFAV
QYRNQARKGRDFAGRFVWRMCLLAVFACMNAAFFPGGDVLLTFSLAGLLLVPCRRLKTSSLVALSLFFLAQPLEWAYAAV
QWMHPGWVPPSLSVAESYASLKSAVDTGNFWVMAWENLTTGQWASLAWGIEAGRLMQAPGLFLLGFVLGRQDFFLQNDGT
AVFWTRGLLFSLAGACAFYVVMCLPGLPGPVHTVFSMWHNVCFTGVWVAGFVLLYRLEYFRKATAPLLTYGRMSLTNYVS
QSVIGSLIFFPYALGLAPYCGYLASFVVGFAAMTGQIWFCRWWLERHRYGVLEGLWHRATWLAAGKVSAPEHR

Specific function: Involved in transport (Potential) [H]

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007349 [H]

Pfam domain/function: PF04235 DUF418 [H]

EC number: NA

Molecular weight: Translated: 44297; Mature: 44166

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVYPPGNERIYVVDALRGFAVMAIMLLHFLEHFIYNSYPVASSPMMEAANQQFKEVFF
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FLFAGKSYTIFALLFGFTFAVQYRNQARKGRDFAGRFVWRMCLLAVFACMNAAFFPGGDV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LLTFSLAGLLLVPCRRLKTSSLVALSLFFLAQPLEWAYAAVQWMHPGWVPPSLSVAESYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SLKSAVDTGNFWVMAWENLTTGQWASLAWGIEAGRLMQAPGLFLLGFVLGRQDFFLQNDG
HHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCCHHCCCHHHHHHHHHCCCCEEEECCC
TAVFWTRGLLFSLAGACAFYVVMCLPGLPGPVHTVFSMWHNVCFTGVWVAGFVLLYRLEY
CEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRKATAPLLTYGRMSLTNYVSQSVIGSLIFFPYALGLAPYCGYLASFVVGFAAMTGQIWF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
CRWWLERHRYGVLEGLWHRATWLAAGKVSAPEHR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PSVYPPGNERIYVVDALRGFAVMAIMLLHFLEHFIYNSYPVASSPMMEAANQQFKEVFF
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
FLFAGKSYTIFALLFGFTFAVQYRNQARKGRDFAGRFVWRMCLLAVFACMNAAFFPGGDV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LLTFSLAGLLLVPCRRLKTSSLVALSLFFLAQPLEWAYAAVQWMHPGWVPPSLSVAESYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SLKSAVDTGNFWVMAWENLTTGQWASLAWGIEAGRLMQAPGLFLLGFVLGRQDFFLQNDG
HHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCCHHCCCHHHHHHHHHCCCCEEEECCC
TAVFWTRGLLFSLAGACAFYVVMCLPGLPGPVHTVFSMWHNVCFTGVWVAGFVLLYRLEY
CEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRKATAPLLTYGRMSLTNYVSQSVIGSLIFFPYALGLAPYCGYLASFVVGFAAMTGQIWF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
CRWWLERHRYGVLEGLWHRATWLAAGKVSAPEHR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]