Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735642

Identifier: 187735642

GI number: 187735642

Start: 1375379

End: 1376257

Strand: Direct

Name: 187735642

Synonym: Amuc_1147

Alternate gene names: NA

Gene position: 1375379-1376257 (Clockwise)

Preceding gene: 187735641

Following gene: 187735643

Centisome position: 51.63

GC content: 35.15

Gene sequence:

>879_bases
ATGCTGTCCAATTCAATATGTTCATATATTCCGGAGTTGCCACCGAATGCCCGTGAATATCCAAACAAGTGGAATTCGCA
GAAATGGAATAAATGTGGTAAAAAATGGATTTCTTTTTTATGGCGTGTTTTTTTCTGTGAAGATAATAACTGCGTTCCTT
CGTATGAGCACTATTCTCATTTATATATTGGTTTTCAGTCCAGTATGGATACCCTTTATTTCATGAATAATGGGGCGGTA
ATTCACTTTTTCTCAAAGAAAAAAGGGAAAAAAGAGATAGAGGAAATTCGTTTTTATACAAGTCAGCAGGCTGATAGAAA
TGGAATTCGCATTCAGAATTATCTACATAATTCCTCTTATCAAAATATTCCTATTTATTGGGAAGGGACAGGTGGTCTTT
ATCCTCTTGAAGGAGGATTTATTGTCACACCAAGTTTTTGTTCCAGCGGAAAGCTTTGCGATATGAAAGCTTATGAACTT
AATCATATTGAAAATTCACGCAGTATCGATTTTGTGCAAGGAGCTTTTAGTCTGGCAAAATATCCGGAAGAAAGTCGTGC
ATTTAGAGAGCTTCCTTCGTATTTCTGTGAACTGGCAGATTCCTCATTTGACTATGAATCATGGGAGATGGCTATGACAT
CGGAATCCATTCCTCTGGAACACAACTGTGTTCATCCGTTTTATAAGAATGACATATGTATAGCTGAATTGGTAATTGTT
AATTTAATATGGGGAACTTCTTATTATCCCTATCAAGATTCATATGTACTTTTGTTACGCTACTCTCCATCAGTAGAATC
TTGTGTTATCCAACTTGTTGACCTTGTATTGGAAAAATTTCCCAGTATCAGATTAATAGAAAATAAAGAAATTATATGA

Upstream 100 bases:

>100_bases
AAAATTTTATAAAAATGAATCGAAAAATAAATAAGTACTATTTTGATATTAATAGTGAAGCAAAGTATATTTTTTTGAAT
GCAAAAATGGTTTGCATTAT

Downstream 100 bases:

>100_bases
TGATTTTGTCTAATTTTGAAAACTATTTTTAATCATCAGAAGATGATGCGAAATACTGAAAGCTGTCCTGATGCCAAAAA
GAGATAGAAATCTTATGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MLSNSICSYIPELPPNAREYPNKWNSQKWNKCGKKWISFLWRVFFCEDNNCVPSYEHYSHLYIGFQSSMDTLYFMNNGAV
IHFFSKKKGKKEIEEIRFYTSQQADRNGIRIQNYLHNSSYQNIPIYWEGTGGLYPLEGGFIVTPSFCSSGKLCDMKAYEL
NHIENSRSIDFVQGAFSLAKYPEESRAFRELPSYFCELADSSFDYESWEMAMTSESIPLEHNCVHPFYKNDICIAELVIV
NLIWGTSYYPYQDSYVLLLRYSPSVESCVIQLVDLVLEKFPSIRLIENKEII

Sequences:

>Translated_292_residues
MLSNSICSYIPELPPNAREYPNKWNSQKWNKCGKKWISFLWRVFFCEDNNCVPSYEHYSHLYIGFQSSMDTLYFMNNGAV
IHFFSKKKGKKEIEEIRFYTSQQADRNGIRIQNYLHNSSYQNIPIYWEGTGGLYPLEGGFIVTPSFCSSGKLCDMKAYEL
NHIENSRSIDFVQGAFSLAKYPEESRAFRELPSYFCELADSSFDYESWEMAMTSESIPLEHNCVHPFYKNDICIAELVIV
NLIWGTSYYPYQDSYVLLLRYSPSVESCVIQLVDLVLEKFPSIRLIENKEII
>Mature_292_residues
MLSNSICSYIPELPPNAREYPNKWNSQKWNKCGKKWISFLWRVFFCEDNNCVPSYEHYSHLYIGFQSSMDTLYFMNNGAV
IHFFSKKKGKKEIEEIRFYTSQQADRNGIRIQNYLHNSSYQNIPIYWEGTGGLYPLEGGFIVTPSFCSSGKLCDMKAYEL
NHIENSRSIDFVQGAFSLAKYPEESRAFRELPSYFCELADSSFDYESWEMAMTSESIPLEHNCVHPFYKNDICIAELVIV
NLIWGTSYYPYQDSYVLLLRYSPSVESCVIQLVDLVLEKFPSIRLIENKEII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34122; Mature: 34122

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNSICSYIPELPPNAREYPNKWNSQKWNKCGKKWISFLWRVFFCEDNNCVPSYEHYSH
CCCCCHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCHHCCEE
LYIGFQSSMDTLYFMNNGAVIHFFSKKKGKKEIEEIRFYTSQQADRNGIRIQNYLHNSSY
EEEEECCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
QNIPIYWEGTGGLYPLEGGFIVTPSFCSSGKLCDMKAYELNHIENSRSIDFVQGAFSLAK
CCCCEEEECCCCEEEECCCEEECCCCCCCCCEECEEHHHHHCCCCCCCCHHHHHHHHHHH
YPEESRAFRELPSYFCELADSSFDYESWEMAMTSESIPLEHNCVHPFYKNDICIAELVIV
CCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
NLIWGTSYYPYQDSYVLLLRYSPSVESCVIQLVDLVLEKFPSIRLIENKEII
HHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCC
>Mature Secondary Structure
MLSNSICSYIPELPPNAREYPNKWNSQKWNKCGKKWISFLWRVFFCEDNNCVPSYEHYSH
CCCCCHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCHHCCEE
LYIGFQSSMDTLYFMNNGAVIHFFSKKKGKKEIEEIRFYTSQQADRNGIRIQNYLHNSSY
EEEEECCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
QNIPIYWEGTGGLYPLEGGFIVTPSFCSSGKLCDMKAYELNHIENSRSIDFVQGAFSLAK
CCCCEEEECCCCEEEECCCEEECCCCCCCCCEECEEHHHHHCCCCCCCCHHHHHHHHHHH
YPEESRAFRELPSYFCELADSSFDYESWEMAMTSESIPLEHNCVHPFYKNDICIAELVIV
CCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
NLIWGTSYYPYQDSYVLLLRYSPSVESCVIQLVDLVLEKFPSIRLIENKEII
HHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA