Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735642
Identifier: 187735642
GI number: 187735642
Start: 1375379
End: 1376257
Strand: Direct
Name: 187735642
Synonym: Amuc_1147
Alternate gene names: NA
Gene position: 1375379-1376257 (Clockwise)
Preceding gene: 187735641
Following gene: 187735643
Centisome position: 51.63
GC content: 35.15
Gene sequence:
>879_bases ATGCTGTCCAATTCAATATGTTCATATATTCCGGAGTTGCCACCGAATGCCCGTGAATATCCAAACAAGTGGAATTCGCA GAAATGGAATAAATGTGGTAAAAAATGGATTTCTTTTTTATGGCGTGTTTTTTTCTGTGAAGATAATAACTGCGTTCCTT CGTATGAGCACTATTCTCATTTATATATTGGTTTTCAGTCCAGTATGGATACCCTTTATTTCATGAATAATGGGGCGGTA ATTCACTTTTTCTCAAAGAAAAAAGGGAAAAAAGAGATAGAGGAAATTCGTTTTTATACAAGTCAGCAGGCTGATAGAAA TGGAATTCGCATTCAGAATTATCTACATAATTCCTCTTATCAAAATATTCCTATTTATTGGGAAGGGACAGGTGGTCTTT ATCCTCTTGAAGGAGGATTTATTGTCACACCAAGTTTTTGTTCCAGCGGAAAGCTTTGCGATATGAAAGCTTATGAACTT AATCATATTGAAAATTCACGCAGTATCGATTTTGTGCAAGGAGCTTTTAGTCTGGCAAAATATCCGGAAGAAAGTCGTGC ATTTAGAGAGCTTCCTTCGTATTTCTGTGAACTGGCAGATTCCTCATTTGACTATGAATCATGGGAGATGGCTATGACAT CGGAATCCATTCCTCTGGAACACAACTGTGTTCATCCGTTTTATAAGAATGACATATGTATAGCTGAATTGGTAATTGTT AATTTAATATGGGGAACTTCTTATTATCCCTATCAAGATTCATATGTACTTTTGTTACGCTACTCTCCATCAGTAGAATC TTGTGTTATCCAACTTGTTGACCTTGTATTGGAAAAATTTCCCAGTATCAGATTAATAGAAAATAAAGAAATTATATGA
Upstream 100 bases:
>100_bases AAAATTTTATAAAAATGAATCGAAAAATAAATAAGTACTATTTTGATATTAATAGTGAAGCAAAGTATATTTTTTTGAAT GCAAAAATGGTTTGCATTAT
Downstream 100 bases:
>100_bases TGATTTTGTCTAATTTTGAAAACTATTTTTAATCATCAGAAGATGATGCGAAATACTGAAAGCTGTCCTGATGCCAAAAA GAGATAGAAATCTTATGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MLSNSICSYIPELPPNAREYPNKWNSQKWNKCGKKWISFLWRVFFCEDNNCVPSYEHYSHLYIGFQSSMDTLYFMNNGAV IHFFSKKKGKKEIEEIRFYTSQQADRNGIRIQNYLHNSSYQNIPIYWEGTGGLYPLEGGFIVTPSFCSSGKLCDMKAYEL NHIENSRSIDFVQGAFSLAKYPEESRAFRELPSYFCELADSSFDYESWEMAMTSESIPLEHNCVHPFYKNDICIAELVIV NLIWGTSYYPYQDSYVLLLRYSPSVESCVIQLVDLVLEKFPSIRLIENKEII
Sequences:
>Translated_292_residues MLSNSICSYIPELPPNAREYPNKWNSQKWNKCGKKWISFLWRVFFCEDNNCVPSYEHYSHLYIGFQSSMDTLYFMNNGAV IHFFSKKKGKKEIEEIRFYTSQQADRNGIRIQNYLHNSSYQNIPIYWEGTGGLYPLEGGFIVTPSFCSSGKLCDMKAYEL NHIENSRSIDFVQGAFSLAKYPEESRAFRELPSYFCELADSSFDYESWEMAMTSESIPLEHNCVHPFYKNDICIAELVIV NLIWGTSYYPYQDSYVLLLRYSPSVESCVIQLVDLVLEKFPSIRLIENKEII >Mature_292_residues MLSNSICSYIPELPPNAREYPNKWNSQKWNKCGKKWISFLWRVFFCEDNNCVPSYEHYSHLYIGFQSSMDTLYFMNNGAV IHFFSKKKGKKEIEEIRFYTSQQADRNGIRIQNYLHNSSYQNIPIYWEGTGGLYPLEGGFIVTPSFCSSGKLCDMKAYEL NHIENSRSIDFVQGAFSLAKYPEESRAFRELPSYFCELADSSFDYESWEMAMTSESIPLEHNCVHPFYKNDICIAELVIV NLIWGTSYYPYQDSYVLLLRYSPSVESCVIQLVDLVLEKFPSIRLIENKEII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34122; Mature: 34122
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNSICSYIPELPPNAREYPNKWNSQKWNKCGKKWISFLWRVFFCEDNNCVPSYEHYSH CCCCCHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCHHCCEE LYIGFQSSMDTLYFMNNGAVIHFFSKKKGKKEIEEIRFYTSQQADRNGIRIQNYLHNSSY EEEEECCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC QNIPIYWEGTGGLYPLEGGFIVTPSFCSSGKLCDMKAYELNHIENSRSIDFVQGAFSLAK CCCCEEEECCCCEEEECCCEEECCCCCCCCCEECEEHHHHHCCCCCCCCHHHHHHHHHHH YPEESRAFRELPSYFCELADSSFDYESWEMAMTSESIPLEHNCVHPFYKNDICIAELVIV CCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH NLIWGTSYYPYQDSYVLLLRYSPSVESCVIQLVDLVLEKFPSIRLIENKEII HHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCC >Mature Secondary Structure MLSNSICSYIPELPPNAREYPNKWNSQKWNKCGKKWISFLWRVFFCEDNNCVPSYEHYSH CCCCCHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCHHCCEE LYIGFQSSMDTLYFMNNGAVIHFFSKKKGKKEIEEIRFYTSQQADRNGIRIQNYLHNSSY EEEEECCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC QNIPIYWEGTGGLYPLEGGFIVTPSFCSSGKLCDMKAYELNHIENSRSIDFVQGAFSLAK CCCCEEEECCCCEEEECCCEEECCCCCCCCCEECEEHHHHHCCCCCCCCHHHHHHHHHHH YPEESRAFRELPSYFCELADSSFDYESWEMAMTSESIPLEHNCVHPFYKNDICIAELVIV CCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH NLIWGTSYYPYQDSYVLLLRYSPSVESCVIQLVDLVLEKFPSIRLIENKEII HHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA