Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735611

Identifier: 187735611

GI number: 187735611

Start: 1334351

End: 1335268

Strand: Reverse

Name: 187735611

Synonym: Amuc_1116

Alternate gene names: NA

Gene position: 1335268-1334351 (Counterclockwise)

Preceding gene: 187735614

Following gene: 187735609

Centisome position: 50.12

GC content: 58.17

Gene sequence:

>918_bases
ATGAGCGCTACACCGAACAGCCTTTTCCGCCATTATCTTGATTCCCTGATCCAGCAGGGAACAACGCGAACGAGCCTGAC
GGATGAAGCCAGAAACGTTCTCAGAACATGGTACGTGGCTTCCAGGCAGGGAGGCCGTCCCGCCGCATCAGCACCCGCTT
CTCCGGAACCGCCGCCCCTGCAGGCAGCCGCTCCTGCCTCCGCTCCTGCCTCCGCTCCTGCCGGAAAGCCGGAACCGCCG
GAGCTGTTTCCGCAAAACAGGGAACCGGCCTCTGCCATTACCCTCCCGGAAGGGACAATGGAAGACAAGCTGCAATACCT
CCGTAATCTGGCGCAGAACTGGAAACCGGCGCGGGAACTCAACTCCCTGCGGGACACCATGGTCTTTGCCACGGGCAATC
CCCATACGAAACTCATGCTCATCGGGGAAGCTCCCGGATATTATGAAGAAGTGCAGCAGGAGCCCTTTGTGGGCCGTGCC
GGGGAAAAACTCAACCAGATATTAAGGGCCATGGGGCTCTCCAGAGACATGGTCTATATTTCCAATATCGTCAAATTCCG
CCCGGCCCTCCCCAACCAGCGGACCAATAACCGTGCACCCACGCCGGAAGAAATTGAAGCATGCCTGCCCATCATCATGC
ATGAAATCCGGGTCATCCAGCCGAAAATGATTGTAGCCTTGGGCGGTACCGCCGCCGTAGGCCTATTGGGGGAACAGGGA
TCCGTCAGTTCCATGCGCGGCAGGTTCCACGACCTTAACGGCATTCCCGTACGCGTCACTTACCATCCCAGTTATCTGCT
CAGATCGGACAGCCCGCGGGAAAAACGCAAGGTATGGGAAGACATGCTGGCCGTTATGGAACGCCTGGACATGCCCATCT
CAGAAAAACAGCGCGGCTACTTCCTGCCCAGGGCATAA

Upstream 100 bases:

>100_bases
CCGTGTCATTTCCCGGAGAGGAGCGTTCCATGAAGGCCGGGGAGCCTGCGAATCGTCGTGACAGACGGCCTCTTATGGAC
TAATCTGGCTTTATCCTCCC

Downstream 100 bases:

>100_bases
CCATGGGGACTCCCTCATGCCGCCCTTTTCCGGCTGCGGCAGTCAAACAGCCGTCCCTTCATAGAAAGTCCGTTCCTGCA
ATGCCGGTTTTGTTGTTCCA

Product: phage SPO1 DNA polymerase-related protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; Bacteriophage-Related DNA Polymerase; Phage DNA Polymerase; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Phage SpO1 DNA Polymerase-Related Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSATPNSLFRHYLDSLIQQGTTRTSLTDEARNVLRTWYVASRQGGRPAASAPASPEPPPLQAAAPASAPASAPAGKPEPP
ELFPQNREPASAITLPEGTMEDKLQYLRNLAQNWKPARELNSLRDTMVFATGNPHTKLMLIGEAPGYYEEVQQEPFVGRA
GEKLNQILRAMGLSRDMVYISNIVKFRPALPNQRTNNRAPTPEEIEACLPIIMHEIRVIQPKMIVALGGTAAVGLLGEQG
SVSSMRGRFHDLNGIPVRVTYHPSYLLRSDSPREKRKVWEDMLAVMERLDMPISEKQRGYFLPRA

Sequences:

>Translated_305_residues
MSATPNSLFRHYLDSLIQQGTTRTSLTDEARNVLRTWYVASRQGGRPAASAPASPEPPPLQAAAPASAPASAPAGKPEPP
ELFPQNREPASAITLPEGTMEDKLQYLRNLAQNWKPARELNSLRDTMVFATGNPHTKLMLIGEAPGYYEEVQQEPFVGRA
GEKLNQILRAMGLSRDMVYISNIVKFRPALPNQRTNNRAPTPEEIEACLPIIMHEIRVIQPKMIVALGGTAAVGLLGEQG
SVSSMRGRFHDLNGIPVRVTYHPSYLLRSDSPREKRKVWEDMLAVMERLDMPISEKQRGYFLPRA
>Mature_304_residues
SATPNSLFRHYLDSLIQQGTTRTSLTDEARNVLRTWYVASRQGGRPAASAPASPEPPPLQAAAPASAPASAPAGKPEPPE
LFPQNREPASAITLPEGTMEDKLQYLRNLAQNWKPARELNSLRDTMVFATGNPHTKLMLIGEAPGYYEEVQQEPFVGRAG
EKLNQILRAMGLSRDMVYISNIVKFRPALPNQRTNNRAPTPEEIEACLPIIMHEIRVIQPKMIVALGGTAAVGLLGEQGS
VSSMRGRFHDLNGIPVRVTYHPSYLLRSDSPREKRKVWEDMLAVMERLDMPISEKQRGYFLPRA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 33844; Mature: 33713

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATPNSLFRHYLDSLIQQGTTRTSLTDEARNVLRTWYVASRQGGRPAASAPASPEPPPL
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QAAAPASAPASAPAGKPEPPELFPQNREPASAITLPEGTMEDKLQYLRNLAQNWKPAREL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHH
NSLRDTMVFATGNPHTKLMLIGEAPGYYEEVQQEPFVGRAGEKLNQILRAMGLSRDMVYI
HHHHHHEEEECCCCCEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH
SNIVKFRPALPNQRTNNRAPTPEEIEACLPIIMHEIRVIQPKMIVALGGTAAVGLLGEQG
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHEEECCCCC
SVSSMRGRFHDLNGIPVRVTYHPSYLLRSDSPREKRKVWEDMLAVMERLDMPISEKQRGY
CHHHHHHHHCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
FLPRA
CCCCC
>Mature Secondary Structure 
SATPNSLFRHYLDSLIQQGTTRTSLTDEARNVLRTWYVASRQGGRPAASAPASPEPPPL
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QAAAPASAPASAPAGKPEPPELFPQNREPASAITLPEGTMEDKLQYLRNLAQNWKPAREL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHH
NSLRDTMVFATGNPHTKLMLIGEAPGYYEEVQQEPFVGRAGEKLNQILRAMGLSRDMVYI
HHHHHHEEEECCCCCEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH
SNIVKFRPALPNQRTNNRAPTPEEIEACLPIIMHEIRVIQPKMIVALGGTAAVGLLGEQG
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHEEECCCCC
SVSSMRGRFHDLNGIPVRVTYHPSYLLRSDSPREKRKVWEDMLAVMERLDMPISEKQRGY
CHHHHHHHHCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
FLPRA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA