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The map label for this gene is omp85 [H]

Identifier: 187735548

GI number: 187735548

Start: 1256369

End: 1258792

Strand: Direct

Name: omp85 [H]

Synonym: Amuc_1053

Alternate gene names: 187735548

Gene position: 1256369-1258792 (Clockwise)

Preceding gene: 187735532

Following gene: 187735549

Centisome position: 47.16

GC content: 54.41

Gene sequence:

>2424_bases
ATGATTCGTCCCGTTTTTTTGTATGTTTCCTTTCCCTTGATAGCATGTTCGGCTGTTTTGGCCCAGGATGAAACTTCCCT
TAACAGAGGCGCCTATGGTTCCGTGATGACTCCGGAACAGGTAATGCGGGAACTGGGGCCGGGCACGGGGCTTCTTCCCG
GTGACCAGGCGTATGAGGGGCGGCCTGTGAAGAGCGTTTCCGTGCGGTACAGAAGCACCGGCAAGACCGTGTCCGAAGAC
CGTCTGAAAAATTTGCTGGCTACGCAGCCGGGCACCAGTTATTCCCCGGAAGTGGTCAACAAGGACTTGGAACGGTTGTT
GGAAAGCGGTCTGGTAGGCGGCAATACAACAGTAGCCGTGGAGCCTTCCGGCGACGGCGTGGCGGTGGTGTTTGAAATGG
CGGCCCAGAATCTGCTGGGCGGCGTGGGGTTCCGCGGCAATACCGCGTTCGACAACAGGGACCTCTCCGAGGAATGCGGG
CTGAAGGGGGGGGAAGCTCTCAGCGACAAGGCCCTGAGCAGCGCTATTGCCAAGCTGCGCACTTATTACCAGGAAGCCCG
GTATCCGGATGTACGTGTTTCCTATTTTTACCAGAAAACGGAACGGCCCGGCTTTGTGGATGTGGTCTTCGACATTAACG
AAGGAAAAAAGGCCAATATTATCAAGATTGACTTTGTGGGCAATGAACACATCAGCGCCAAGGATCTCCGACAGGTGATG
AAAACCAAGGAGAAGGGCTGGTTGACCTGGATTACCAAATCCGGACGCATTGACCGTGAACAAGTGGAGGACGATCTGGC
GGAATTGGTGACTTATTACCGCAATAAAGGTTATCTGCGCGTCAAGCTGGACAAGGTGGAATATTTTGACGCCGGCAAAG
GCAATGAGCAGAAGCTGACGATGAGAATTACCCTTACCGAGGGGCGCCGCTACAAGGTCAACCAGGTTGCCTTCGGCCCC
ACCAAGGTGTTTACGGCCCAGGAACTGATTCCTGGCCTGAGCATGTACAACGGGGATACCTATTCCGCCCAGAAAGTGGC
CGACGACGTGACGATGATCCGCCGTTATTACGGTTCCCGGGGGTATGCGGACGCCTCCGTGCGTCCGGACATTCAGGAAG
TGGGCGTTGATCCCAAGACAGGTTACGGACAAATCAACATCGTGTACCATGTGACGGAAGGCAATCCCTACCGCGTAGGC
AATATCCGCCTGACCGGGAATAACCGCACGAAGGATTACGTCATCCGCCAGGAACTTCCCCTCCAGTCCAATGACCCCAT
GAACGCCGTGGATTTGGATACCGCCCAGAAGCGCCTCCAGAACCTGAACTATTTTGACATGGTGGACGTAGCCCAGGTGG
GATCCACGCGACCCGGCTACCGTGATATCAATATCGAGGTGGCGGAAAAACGTACGGGGTCCCTGAATATCGGCGTGGCA
TTTTCCTCTATTGAAAGCGTTTACCTGTTCGCAGGCATCACCCAGTCCAATTTTGACATGTATGACTGGTCCTCTTTCGT
GGGCGGCGGCCAGCGTTTCGCGATTAACGCCCGTGTCGGTTTTGAAACGCAGGATGCCAGTATTTCCTGGGTGGATCCGT
GGTTCCTGCACCGCAAGCTGGCCTTCGGGACGGAAATCTTCTACAGCAATTCCACATATTTTTCCGATTATTACGACCAG
CAGAACTATGGCTTTGCCATTTCTCTCCGCAAGCCGATCGGGGAACTGGATTACGTGAAACTGGAATACCGCCTGGAACA
GTACCGTATTGACGCCGAAGGGAACGCCCCTATCTTCTTCTGGCAACAGGACGGAGACTACCTGCGCAGCCATGTGGAAC
TTTCCTACACCATTGATACCCGCGACGCGCAGATTTTTCCCCGCAAGGGAGGCAAATTTGAAGTGCTGGCCGGTTATTCC
GGCCTGGGCGGCGATGTGCATACATACAATTTCGGCGTGAATGGCTCCTATTACTGGAATTTGCGCGGAGACACCATTTT
CAGCATCAATGCCGGTGCGGCTACCGTGGATTCCTATGGCAACCACGATGTGCCCATTTTTGAGCGCCTCTACCTCGGCG
GGCCATACAACATGCGCGGTTTCCGTTTCCGGGACGTGGCGCCGTACAATCCCGCCCTGAGCGGTGATGAGACGATGGGC
GGCCGTTCCTCCTTCTTCTGCCAGTTTGAATATTCCATTCCTGTGATTGAAGAAGTGCGCGTCGCGGTGTTTTATGACAT
CGGTTTTGTCAACGGAGATTCTTTTGACTTCAGCACGTCCAAAATAGTTTCCGACTACGGGATCGGCCTGCGCCTGAACC
TGCCCATCGGTCCGCTGGCAGTGGACTATGCCATTCCGATTCAGAAGAACAACGCCATTGACCGCGGAGGACAATTCCAG
TTCTATCTCAATTATTCCTATTAA

Upstream 100 bases:

>100_bases
GATGTAATAGAATACGGGGCAACTGTGTTCTACGCGGAATCACGTCTTGACTATGCAAGAGGAAAAGTCCTTTATATCCC
AAGCATTAAGTTCAGCGCTC

Downstream 100 bases:

>100_bases
TTACGTTTGATAATTTCTCTACCGTTTGACGACATGAGTAATTTCCGCATTCTTATCCTGGCGTTTCTGGTGGTGGTGCT
GGCTGTTCTGGGAATGATTT

Product: outer membrane protein assembly complex, YaeT protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 807; Mature: 807

Protein sequence:

>807_residues
MIRPVFLYVSFPLIACSAVLAQDETSLNRGAYGSVMTPEQVMRELGPGTGLLPGDQAYEGRPVKSVSVRYRSTGKTVSED
RLKNLLATQPGTSYSPEVVNKDLERLLESGLVGGNTTVAVEPSGDGVAVVFEMAAQNLLGGVGFRGNTAFDNRDLSEECG
LKGGEALSDKALSSAIAKLRTYYQEARYPDVRVSYFYQKTERPGFVDVVFDINEGKKANIIKIDFVGNEHISAKDLRQVM
KTKEKGWLTWITKSGRIDREQVEDDLAELVTYYRNKGYLRVKLDKVEYFDAGKGNEQKLTMRITLTEGRRYKVNQVAFGP
TKVFTAQELIPGLSMYNGDTYSAQKVADDVTMIRRYYGSRGYADASVRPDIQEVGVDPKTGYGQINIVYHVTEGNPYRVG
NIRLTGNNRTKDYVIRQELPLQSNDPMNAVDLDTAQKRLQNLNYFDMVDVAQVGSTRPGYRDINIEVAEKRTGSLNIGVA
FSSIESVYLFAGITQSNFDMYDWSSFVGGGQRFAINARVGFETQDASISWVDPWFLHRKLAFGTEIFYSNSTYFSDYYDQ
QNYGFAISLRKPIGELDYVKLEYRLEQYRIDAEGNAPIFFWQQDGDYLRSHVELSYTIDTRDAQIFPRKGGKFEVLAGYS
GLGGDVHTYNFGVNGSYYWNLRGDTIFSINAGAATVDSYGNHDVPIFERLYLGGPYNMRGFRFRDVAPYNPALSGDETMG
GRSSFFCQFEYSIPVIEEVRVAVFYDIGFVNGDSFDFSTSKIVSDYGIGLRLNLPIGPLAVDYAIPIQKNNAIDRGGQFQ
FYLNYSY

Sequences:

>Translated_807_residues
MIRPVFLYVSFPLIACSAVLAQDETSLNRGAYGSVMTPEQVMRELGPGTGLLPGDQAYEGRPVKSVSVRYRSTGKTVSED
RLKNLLATQPGTSYSPEVVNKDLERLLESGLVGGNTTVAVEPSGDGVAVVFEMAAQNLLGGVGFRGNTAFDNRDLSEECG
LKGGEALSDKALSSAIAKLRTYYQEARYPDVRVSYFYQKTERPGFVDVVFDINEGKKANIIKIDFVGNEHISAKDLRQVM
KTKEKGWLTWITKSGRIDREQVEDDLAELVTYYRNKGYLRVKLDKVEYFDAGKGNEQKLTMRITLTEGRRYKVNQVAFGP
TKVFTAQELIPGLSMYNGDTYSAQKVADDVTMIRRYYGSRGYADASVRPDIQEVGVDPKTGYGQINIVYHVTEGNPYRVG
NIRLTGNNRTKDYVIRQELPLQSNDPMNAVDLDTAQKRLQNLNYFDMVDVAQVGSTRPGYRDINIEVAEKRTGSLNIGVA
FSSIESVYLFAGITQSNFDMYDWSSFVGGGQRFAINARVGFETQDASISWVDPWFLHRKLAFGTEIFYSNSTYFSDYYDQ
QNYGFAISLRKPIGELDYVKLEYRLEQYRIDAEGNAPIFFWQQDGDYLRSHVELSYTIDTRDAQIFPRKGGKFEVLAGYS
GLGGDVHTYNFGVNGSYYWNLRGDTIFSINAGAATVDSYGNHDVPIFERLYLGGPYNMRGFRFRDVAPYNPALSGDETMG
GRSSFFCQFEYSIPVIEEVRVAVFYDIGFVNGDSFDFSTSKIVSDYGIGLRLNLPIGPLAVDYAIPIQKNNAIDRGGQFQ
FYLNYSY
>Mature_807_residues
MIRPVFLYVSFPLIACSAVLAQDETSLNRGAYGSVMTPEQVMRELGPGTGLLPGDQAYEGRPVKSVSVRYRSTGKTVSED
RLKNLLATQPGTSYSPEVVNKDLERLLESGLVGGNTTVAVEPSGDGVAVVFEMAAQNLLGGVGFRGNTAFDNRDLSEECG
LKGGEALSDKALSSAIAKLRTYYQEARYPDVRVSYFYQKTERPGFVDVVFDINEGKKANIIKIDFVGNEHISAKDLRQVM
KTKEKGWLTWITKSGRIDREQVEDDLAELVTYYRNKGYLRVKLDKVEYFDAGKGNEQKLTMRITLTEGRRYKVNQVAFGP
TKVFTAQELIPGLSMYNGDTYSAQKVADDVTMIRRYYGSRGYADASVRPDIQEVGVDPKTGYGQINIVYHVTEGNPYRVG
NIRLTGNNRTKDYVIRQELPLQSNDPMNAVDLDTAQKRLQNLNYFDMVDVAQVGSTRPGYRDINIEVAEKRTGSLNIGVA
FSSIESVYLFAGITQSNFDMYDWSSFVGGGQRFAINARVGFETQDASISWVDPWFLHRKLAFGTEIFYSNSTYFSDYYDQ
QNYGFAISLRKPIGELDYVKLEYRLEQYRIDAEGNAPIFFWQQDGDYLRSHVELSYTIDTRDAQIFPRKGGKFEVLAGYS
GLGGDVHTYNFGVNGSYYWNLRGDTIFSINAGAATVDSYGNHDVPIFERLYLGGPYNMRGFRFRDVAPYNPALSGDETMG
GRSSFFCQFEYSIPVIEEVRVAVFYDIGFVNGDSFDFSTSKIVSDYGIGLRLNLPIGPLAVDYAIPIQKNNAIDRGGQFQ
FYLNYSY

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=758, Percent_Identity=23.6147757255937, Blast_Score=160, Evalue=3e-40,
Organism=Drosophila melanogaster, GI45552629, Length=225, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=2e-11,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 90547; Mature: 90547

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRPVFLYVSFPLIACSAVLAQDETSLNRGAYGSVMTPEQVMRELGPGTGLLPGDQAYEG
CCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
RPVKSVSVRYRSTGKTVSEDRLKNLLATQPGTSYSPEVVNKDLERLLESGLVGGNTTVAV
CCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
EPSGDGVAVVFEMAAQNLLGGVGFRGNTAFDNRDLSEECGLKGGEALSDKALSSAIAKLR
ECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH
TYYQEARYPDVRVSYFYQKTERPGFVDVVFDINEGKKANIIKIDFVGNEHISAKDLRQVM
HHHHHHCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHH
KTKEKGWLTWITKSGRIDREQVEDDLAELVTYYRNKGYLRVKLDKVEYFDAGKGNEQKLT
HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCEEEE
MRITLTEGRRYKVNQVAFGPTKVFTAQELIPGLSMYNGDTYSAQKVADDVTMIRRYYGSR
EEEEEECCCEEEEEEEEECCHHEEEHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCC
GYADASVRPDIQEVGVDPKTGYGQINIVYHVTEGNPYRVGNIRLTGNNRTKDYVIRQELP
CCCCCCCCCCHHHCCCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCEEEEEECCC
LQSNDPMNAVDLDTAQKRLQNLNYFDMVDVAQVGSTRPGYRDINIEVAEKRTGSLNIGVA
CCCCCCCCEEECHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEE
FSSIESVYLFAGITQSNFDMYDWSSFVGGGQRFAINARVGFETQDASISWVDPWFLHRKL
ECCCCEEEEEEECCCCCCCCCCCHHHCCCCEEEEEEEEECCCCCCCEEEECCHHHHHHHH
AFGTEIFYSNSTYFSDYYDQQNYGFAISLRKPIGELDYVKLEYRLEQYRIDAEGNAPIFF
HCCEEEEECCCCEECCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCEEE
WQQDGDYLRSHVELSYTIDTRDAQIFPRKGGKFEVLAGYSGLGGDVHTYNFGVNGSYYWN
ECCCCHHHHCEEEEEEEEECCCCEEEECCCCEEEEEECCCCCCCCEEEEEECCCCEEEEE
LRGDTIFSINAGAATVDSYGNHDVPIFERLYLGGPYNMRGFRFRDVAPYNPALSGDETMG
ECCCEEEEEECCCEEECCCCCCCCCHHHHEEECCCCCCCCEEEECCCCCCCCCCCCCCCC
GRSSFFCQFEYSIPVIEEVRVAVFYDIGFVNGDSFDFSTSKIVSDYGIGLRLNLPIGPLA
CCCEEEEEEECCCCCHHHEEEEEEEEEEEECCCCCCCCHHHHHHHCCCCEEEECCCCCEE
VDYAIPIQKNNAIDRGGQFQFYLNYSY
EEEEEEEECCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MIRPVFLYVSFPLIACSAVLAQDETSLNRGAYGSVMTPEQVMRELGPGTGLLPGDQAYEG
CCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
RPVKSVSVRYRSTGKTVSEDRLKNLLATQPGTSYSPEVVNKDLERLLESGLVGGNTTVAV
CCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
EPSGDGVAVVFEMAAQNLLGGVGFRGNTAFDNRDLSEECGLKGGEALSDKALSSAIAKLR
ECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH
TYYQEARYPDVRVSYFYQKTERPGFVDVVFDINEGKKANIIKIDFVGNEHISAKDLRQVM
HHHHHHCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHH
KTKEKGWLTWITKSGRIDREQVEDDLAELVTYYRNKGYLRVKLDKVEYFDAGKGNEQKLT
HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCEEEE
MRITLTEGRRYKVNQVAFGPTKVFTAQELIPGLSMYNGDTYSAQKVADDVTMIRRYYGSR
EEEEEECCCEEEEEEEEECCHHEEEHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCC
GYADASVRPDIQEVGVDPKTGYGQINIVYHVTEGNPYRVGNIRLTGNNRTKDYVIRQELP
CCCCCCCCCCHHHCCCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCEEEEEECCC
LQSNDPMNAVDLDTAQKRLQNLNYFDMVDVAQVGSTRPGYRDINIEVAEKRTGSLNIGVA
CCCCCCCCEEECHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEE
FSSIESVYLFAGITQSNFDMYDWSSFVGGGQRFAINARVGFETQDASISWVDPWFLHRKL
ECCCCEEEEEEECCCCCCCCCCCHHHCCCCEEEEEEEEECCCCCCCEEEECCHHHHHHHH
AFGTEIFYSNSTYFSDYYDQQNYGFAISLRKPIGELDYVKLEYRLEQYRIDAEGNAPIFF
HCCEEEEECCCCEECCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCEEE
WQQDGDYLRSHVELSYTIDTRDAQIFPRKGGKFEVLAGYSGLGGDVHTYNFGVNGSYYWN
ECCCCHHHHCEEEEEEEEECCCCEEEECCCCEEEEEECCCCCCCCEEEEEECCCCEEEEE
LRGDTIFSINAGAATVDSYGNHDVPIFERLYLGGPYNMRGFRFRDVAPYNPALSGDETMG
ECCCEEEEEECCCEEECCCCCCCCCHHHHEEECCCCCCCCEEEECCCCCCCCCCCCCCCC
GRSSFFCQFEYSIPVIEEVRVAVFYDIGFVNGDSFDFSTSKIVSDYGIGLRLNLPIGPLA
CCCEEEEEEECCCCCHHHEEEEEEEEEEEECCCCCCCCHHHHHHHCCCCEEEECCCCCEE
VDYAIPIQKNNAIDRGGQFQFYLNYSY
EEEEEEEECCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]