Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yhgN [C]

Identifier: 187735513

GI number: 187735513

Start: 1210602

End: 1211207

Strand: Reverse

Name: yhgN [C]

Synonym: Amuc_1018

Alternate gene names: 187735513

Gene position: 1211207-1210602 (Counterclockwise)

Preceding gene: 187735514

Following gene: 187735512

Centisome position: 45.46

GC content: 55.45

Gene sequence:

>606_bases
ATGCAGGACTTCCTTTCCACTGTTATTCTTCTGTTCATCGTCATCGACCCGGTGGGTCTGGCGCCCATGATCCAGGGAAT
GCTGAAAAAATACTCGCCCGCCCAGCAGAAGGCTATTCTGACACGGGAGCTTGTATTTGCGTTGAGCCTGCTGCTCCTTT
TCTTCTTTTCCGGAAAATTCCTGCTGAACCTGCTGGGGCTGGAACCTTCCACCCTGAGCATTTCCGGAGGCATCCTGCTG
TTTCTCGTAGCGCTGGGCATGGTCTTCCCCGCCAAGGATATGCTTTCTTCTTCCGGACGAGCGGACGGAAAAGACGAACC
CTTCATTGTTCCCATCGCCATGCCCCTGATGGCCGGCCCCTCTTCCCTGTCCATCATTATGCTGCACGCCTCCCAGACTC
CGGACAGCATTTCCCAGATGACCTATGCCGGGGCCATCGTGACCGCCTGGTTCCTCTCCGGAATGGTGCTTTTCATCGCC
CAGAAGTTCCTGCGTCTGCTGGGAGAAAAAGGGACAATCGCCTTGGAACGGATGATGGGCATGGTGCTCATCATGATTTC
CGTCCAGATGTTTATGAACGGCCTCGCCGGCTACGGCGTCAAATAG

Upstream 100 bases:

>100_bases
GCGCTGGTGAAGAAAATAGCAATCCGGGCAGAGAAAATTTCCACTGCTGGCGGTTCCCTTTGACGTACACGCCCGTATCG
TTTACAACGGGGCATATCCC

Downstream 100 bases:

>100_bases
AAAGACGGTTCCGACCATGCTTTGGCTTCTGCACGGCAATCTGGGTTCTCCGGCGGATTGGAAACCCGTCATGGATTTTC
TTCGTGCCGGAGGAGTGGAG

Product: multiple antibiotic resistance (MarC)-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MQDFLSTVILLFIVIDPVGLAPMIQGMLKKYSPAQQKAILTRELVFALSLLLLFFFSGKFLLNLLGLEPSTLSISGGILL
FLVALGMVFPAKDMLSSSGRADGKDEPFIVPIAMPLMAGPSSLSIIMLHASQTPDSISQMTYAGAIVTAWFLSGMVLFIA
QKFLRLLGEKGTIALERMMGMVLIMISVQMFMNGLAGYGVK

Sequences:

>Translated_201_residues
MQDFLSTVILLFIVIDPVGLAPMIQGMLKKYSPAQQKAILTRELVFALSLLLLFFFSGKFLLNLLGLEPSTLSISGGILL
FLVALGMVFPAKDMLSSSGRADGKDEPFIVPIAMPLMAGPSSLSIIMLHASQTPDSISQMTYAGAIVTAWFLSGMVLFIA
QKFLRLLGEKGTIALERMMGMVLIMISVQMFMNGLAGYGVK
>Mature_201_residues
MQDFLSTVILLFIVIDPVGLAPMIQGMLKKYSPAQQKAILTRELVFALSLLLLFFFSGKFLLNLLGLEPSTLSISGGILL
FLVALGMVFPAKDMLSSSGRADGKDEPFIVPIAMPLMAGPSSLSIIMLHASQTPDSISQMTYAGAIVTAWFLSGMVLFIA
QKFLRLLGEKGTIALERMMGMVLIMISVQMFMNGLAGYGVK

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1789842, Length=198, Percent_Identity=42.9292929292929, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1787809, Length=197, Percent_Identity=24.3654822335025, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787494, Length=193, Percent_Identity=27.4611398963731, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21730; Mature: 21730

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDFLSTVILLFIVIDPVGLAPMIQGMLKKYSPAQQKAILTRELVFALSLLLLFFFSGKF
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLNLLGLEPSTLSISGGILLFLVALGMVFPAKDMLSSSGRADGKDEPFIVPIAMPLMAGP
HHHHHCCCCCCEEECCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEEHHHHHCCC
SSLSIIMLHASQTPDSISQMTYAGAIVTAWFLSGMVLFIAQKFLRLLGEKGTIALERMMG
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MVLIMISVQMFMNGLAGYGVK
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQDFLSTVILLFIVIDPVGLAPMIQGMLKKYSPAQQKAILTRELVFALSLLLLFFFSGKF
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLNLLGLEPSTLSISGGILLFLVALGMVFPAKDMLSSSGRADGKDEPFIVPIAMPLMAGP
HHHHHCCCCCCEEECCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEEHHHHHCCC
SSLSIIMLHASQTPDSISQMTYAGAIVTAWFLSGMVLFIAQKFLRLLGEKGTIALERMMG
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MVLIMISVQMFMNGLAGYGVK
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]