Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yghZ [H]

Identifier: 187735501

GI number: 187735501

Start: 1198127

End: 1198675

Strand: Reverse

Name: yghZ [H]

Synonym: Amuc_1006

Alternate gene names: 187735501

Gene position: 1198675-1198127 (Counterclockwise)

Preceding gene: 187735511

Following gene: 187735500

Centisome position: 44.99

GC content: 57.19

Gene sequence:

>549_bases
ATGAAAACAATTAACGGGCAAAACATGACATGCAGGGAGCTGGGCAAAAGCGGCCTGAAGGTTTCAGCCATAGGCCTGGG
CTGCATGGGAATGAGCCATGCCTACGGAGCGCCCGCAGACAAAAAGGAAATGGCGGAACTCCTTTCCCGGGCCGTGGATA
TGGGATATACATTCTTTGATACGGCGGAAGTGTACGGAACGCCCGGACACCCCCACGACAACGAAGAACTGCTGGGGAAA
GCGCTGGCGCCCTACCGGGACAGGATCGTTATTGCGACCAAATTCGGAATCCGTTTCAGCGGCACGGCAGGCCCCGGACC
ATACCCGCTGATCACCGATTCCCGCCCCGGCACAATCCGCCAATCCGTGGAAAGTTCCCTTAAAAGGCTGGGAGTAGAAC
GCATCGGCCTGTATTACCAGCACCGCATGGATGATTCCGTACCGCCGGAGGAAGTGGCGGGCGTCATGCAGGAGTTGATC
CGTGAAGGCAAAATCGCGCATTGGGTATTTCCGAAGCAACGGAGGAAGCCATACGGCGCGCACACGTAA

Upstream 100 bases:

>100_bases
AGCCGGCTATCCAGCTCATTCCGGGAACCTGTAATCATGGTAGCAAAACCTGTAATCCGTCTATCGGAAAAAATAGAAAT
CCTATGGTAGTTTTGCAGGC

Downstream 100 bases:

>100_bases
CATGTCCGGTCACCGCCATCCAGAACCGTTATTCCATGATGGCGCGCTATCATGAATCCCTTCTTCCCGTACTGGAAGAA
CTGGGCATCGGCTTTGTAGC

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKTINGQNMTCRELGKSGLKVSAIGLGCMGMSHAYGAPADKKEMAELLSRAVDMGYTFFDTAEVYGTPGHPHDNEELLGK
ALAPYRDRIVIATKFGIRFSGTAGPGPYPLITDSRPGTIRQSVESSLKRLGVERIGLYYQHRMDDSVPPEEVAGVMQELI
REGKIAHWVFPKQRRKPYGAHT

Sequences:

>Translated_182_residues
MKTINGQNMTCRELGKSGLKVSAIGLGCMGMSHAYGAPADKKEMAELLSRAVDMGYTFFDTAEVYGTPGHPHDNEELLGK
ALAPYRDRIVIATKFGIRFSGTAGPGPYPLITDSRPGTIRQSVESSLKRLGVERIGLYYQHRMDDSVPPEEVAGVMQELI
REGKIAHWVFPKQRRKPYGAHT
>Mature_182_residues
MKTINGQNMTCRELGKSGLKVSAIGLGCMGMSHAYGAPADKKEMAELLSRAVDMGYTFFDTAEVYGTPGHPHDNEELLGK
ALAPYRDRIVIATKFGIRFSGTAGPGPYPLITDSRPGTIRQSVESSLKRLGVERIGLYYQHRMDDSVPPEEVAGVMQELI
REGKIAHWVFPKQRRKPYGAHT

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789375, Length=160, Percent_Identity=35.625, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI87081735, Length=164, Percent_Identity=32.9268292682927, Blast_Score=74, Evalue=4e-15,
Organism=Escherichia coli, GI1788070, Length=165, Percent_Identity=32.7272727272727, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR005399
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: NA

Molecular weight: Translated: 20052; Mature: 20052

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTINGQNMTCRELGKSGLKVSAIGLGCMGMSHAYGAPADKKEMAELLSRAVDMGYTFFD
CCCCCCCCCCHHHHCCCCCEEEEEEECHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEC
TAEVYGTPGHPHDNEELLGKALAPYRDRIVIATKFGIRFSGTAGPGPYPLITDSRPGTIR
HHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCEEECCCCCHHH
QSVESSLKRLGVERIGLYYQHRMDDSVPPEEVAGVMQELIREGKIAHWVFPKQRRKPYGA
HHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCC
HT
CC
>Mature Secondary Structure
MKTINGQNMTCRELGKSGLKVSAIGLGCMGMSHAYGAPADKKEMAELLSRAVDMGYTFFD
CCCCCCCCCCHHHHCCCCCEEEEEEECHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEC
TAEVYGTPGHPHDNEELLGKALAPYRDRIVIATKFGIRFSGTAGPGPYPLITDSRPGTIR
HHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCEEECCCCCHHH
QSVESSLKRLGVERIGLYYQHRMDDSVPPEEVAGVMQELIREGKIAHWVFPKQRRKPYGA
HHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCC
HT
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]