Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yghZ [H]
Identifier: 187735501
GI number: 187735501
Start: 1198127
End: 1198675
Strand: Reverse
Name: yghZ [H]
Synonym: Amuc_1006
Alternate gene names: 187735501
Gene position: 1198675-1198127 (Counterclockwise)
Preceding gene: 187735511
Following gene: 187735500
Centisome position: 44.99
GC content: 57.19
Gene sequence:
>549_bases ATGAAAACAATTAACGGGCAAAACATGACATGCAGGGAGCTGGGCAAAAGCGGCCTGAAGGTTTCAGCCATAGGCCTGGG CTGCATGGGAATGAGCCATGCCTACGGAGCGCCCGCAGACAAAAAGGAAATGGCGGAACTCCTTTCCCGGGCCGTGGATA TGGGATATACATTCTTTGATACGGCGGAAGTGTACGGAACGCCCGGACACCCCCACGACAACGAAGAACTGCTGGGGAAA GCGCTGGCGCCCTACCGGGACAGGATCGTTATTGCGACCAAATTCGGAATCCGTTTCAGCGGCACGGCAGGCCCCGGACC ATACCCGCTGATCACCGATTCCCGCCCCGGCACAATCCGCCAATCCGTGGAAAGTTCCCTTAAAAGGCTGGGAGTAGAAC GCATCGGCCTGTATTACCAGCACCGCATGGATGATTCCGTACCGCCGGAGGAAGTGGCGGGCGTCATGCAGGAGTTGATC CGTGAAGGCAAAATCGCGCATTGGGTATTTCCGAAGCAACGGAGGAAGCCATACGGCGCGCACACGTAA
Upstream 100 bases:
>100_bases AGCCGGCTATCCAGCTCATTCCGGGAACCTGTAATCATGGTAGCAAAACCTGTAATCCGTCTATCGGAAAAAATAGAAAT CCTATGGTAGTTTTGCAGGC
Downstream 100 bases:
>100_bases CATGTCCGGTCACCGCCATCCAGAACCGTTATTCCATGATGGCGCGCTATCATGAATCCCTTCTTCCCGTACTGGAAGAA CTGGGCATCGGCTTTGTAGC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKTINGQNMTCRELGKSGLKVSAIGLGCMGMSHAYGAPADKKEMAELLSRAVDMGYTFFDTAEVYGTPGHPHDNEELLGK ALAPYRDRIVIATKFGIRFSGTAGPGPYPLITDSRPGTIRQSVESSLKRLGVERIGLYYQHRMDDSVPPEEVAGVMQELI REGKIAHWVFPKQRRKPYGAHT
Sequences:
>Translated_182_residues MKTINGQNMTCRELGKSGLKVSAIGLGCMGMSHAYGAPADKKEMAELLSRAVDMGYTFFDTAEVYGTPGHPHDNEELLGK ALAPYRDRIVIATKFGIRFSGTAGPGPYPLITDSRPGTIRQSVESSLKRLGVERIGLYYQHRMDDSVPPEEVAGVMQELI REGKIAHWVFPKQRRKPYGAHT >Mature_182_residues MKTINGQNMTCRELGKSGLKVSAIGLGCMGMSHAYGAPADKKEMAELLSRAVDMGYTFFDTAEVYGTPGHPHDNEELLGK ALAPYRDRIVIATKFGIRFSGTAGPGPYPLITDSRPGTIRQSVESSLKRLGVERIGLYYQHRMDDSVPPEEVAGVMQELI REGKIAHWVFPKQRRKPYGAHT
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789375, Length=160, Percent_Identity=35.625, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI87081735, Length=164, Percent_Identity=32.9268292682927, Blast_Score=74, Evalue=4e-15, Organism=Escherichia coli, GI1788070, Length=165, Percent_Identity=32.7272727272727, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 20052; Mature: 20052
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTINGQNMTCRELGKSGLKVSAIGLGCMGMSHAYGAPADKKEMAELLSRAVDMGYTFFD CCCCCCCCCCHHHHCCCCCEEEEEEECHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEC TAEVYGTPGHPHDNEELLGKALAPYRDRIVIATKFGIRFSGTAGPGPYPLITDSRPGTIR HHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCEEECCCCCHHH QSVESSLKRLGVERIGLYYQHRMDDSVPPEEVAGVMQELIREGKIAHWVFPKQRRKPYGA HHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCC HT CC >Mature Secondary Structure MKTINGQNMTCRELGKSGLKVSAIGLGCMGMSHAYGAPADKKEMAELLSRAVDMGYTFFD CCCCCCCCCCHHHHCCCCCEEEEEEECHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEC TAEVYGTPGHPHDNEELLGKALAPYRDRIVIATKFGIRFSGTAGPGPYPLITDSRPGTIR HHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCCCCEEECCCCCHHH QSVESSLKRLGVERIGLYYQHRMDDSVPPEEVAGVMQELIREGKIAHWVFPKQRRKPYGA HHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCC HT CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]