Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735455
Identifier: 187735455
GI number: 187735455
Start: 1139263
End: 1139406
Strand: Direct
Name: 187735455
Synonym: Amuc_0954
Alternate gene names: NA
Gene position: 1139263-1139406 (Clockwise)
Preceding gene: 187735454
Following gene: 187735459
Centisome position: 42.76
GC content: 63.89
Gene sequence:
>144_bases ATGATGATTCCTTACGGGAACAGGGGCCTTCCGGCCCTGCTGCCTCCCGTTACGGATTTTTTCCGGAAGCGTGATTCTGC GTGTTCCGGCCCTCCGCTGTCCCGGCGCATCCAGCGCGGTACGGCCGGGGACACCGTGCCTTAG
Upstream 100 bases:
>100_bases CCGCGATACGGTTGCGCTGGGAAAAGGCTCTCCGGAGCGCCGGTTCCTGAGATTAAAGGTGACGAGATAGGGAATCACCG GTTTCTCTTTCCGTTTCCCG
Downstream 100 bases:
>100_bases CCAGGGGAAGAATATTACTCCCCGTCATTTTCCGCATCGGCAGGGGGGGCTTTGGGCAGGTTCTTGTCAATGTCTTCCAG AAGGTTGACCAGGTCAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MMIPYGNRGLPALLPPVTDFFRKRDSACSGPPLSRRIQRGTAGDTVP
Sequences:
>Translated_47_residues MMIPYGNRGLPALLPPVTDFFRKRDSACSGPPLSRRIQRGTAGDTVP >Mature_47_residues MMIPYGNRGLPALLPPVTDFFRKRDSACSGPPLSRRIQRGTAGDTVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5114; Mature: 5114
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIPYGNRGLPALLPPVTDFFRKRDSACSGPPLSRRIQRGTAGDTVP CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure MMIPYGNRGLPALLPPVTDFFRKRDSACSGPPLSRRIQRGTAGDTVP CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA