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The map label for this gene is secY [H]

Identifier: 187735434

GI number: 187735434

Start: 1110496

End: 1111998

Strand: Direct

Name: secY [H]

Synonym: Amuc_0933

Alternate gene names: 187735434

Gene position: 1110496-1111998 (Clockwise)

Preceding gene: 187735433

Following gene: 187735435

Centisome position: 41.68

GC content: 58.75

Gene sequence:

>1503_bases
ATGATATCCGCATTTGCAAACTCCATGAAAGTACCGGAGCTCAGGCGCCGGATTTTGTTCACACTGGCGATGATTGTCGT
CGTCCGCCTGGGGGTACAGATTCCCCTGCCGGGCATTGACGTCATGGAGCTGCAGAAAGTGATTGAAGCCTCCGCGAACG
CCAGCGGTCCCGGAGCGGGTCTGGCTACCGTGCTGACCATTTTCTCCGGCGGCGGCCTCCAGCAGTGCGGCATTTTTGCT
TTGGGCATCATGCCCTACATTTCCGCTTCCATCATGACCCAGCTCCTTTCCGCGGTGGTTCCCCAGTGGGCCAAGATGGT
GCGGGAAGAAGGCGGCCGCCAGAAAATGACCAAGTGGACGCGCGCCATCGCCATCGTCATTGCCCTTGTGCAGGGCTGGT
TTCTGGTCGGCACGCTAGAACACCCGGAACGCCTGCAGGCCGTGGGTCTCAACATTCCCGCGGACTGCCAGCTTGTCATT
GACCCCGGCATCCAGTTCGCCCTCATGACGGTGCTCATTATGGTGGCGGGCACCATGTTCCTGATGTGGATAGGCGACCA
GATTACGGAACGCGGCGTCGGCAACGGCGTTTCCCTCATCATTTCCGTCAACATTATTCACGCCCTTCCGGGAGCAGTCA
CCCTGGCCTGGAAAACCCTGGTGTACAAGGACGGCGCGGTTGTCCCCATGGGAGCCATGCTGCTCGTGGCCCTGATTGCC
TTCCTGATTGTCGTGGTGGCGCTCGTCGTGACGGTGACGCAGGCCCAGCGGCGCATTCCCGTGCAGTACGCCAAGCGGGT
CATGGGCAATAAAATGTTCAACGGTGCCACGCAGTACCTGCCTCTCAAGCTTAACTACTCCGGCGTGATGCCCGTCATTT
TCGCTACGGCCATCCTCTCCCTTCCGCAGGTTCTCTTCTCCCAGATCGCCCACTACAACACTACGCTGCAGTGGATCGCG
ACCAAGATGAATGACTGGCTGAATCCCGCTTCTTCCGGCTATTACATTATTTCCGGCCTCATGATTTTCTTCTTCTCCTA
CTTCTGGGTGGCGACCATGTTCCAGCCCTCCCAGATCGCGGAAGACCTGAAGCGCAATGGCGGCTATATTCCCGGCATCC
GTCCCGGCCCCCCCACCGCCCTCTTCCTGGACCAGACCATGCAAAGGCTGACCTTTGCCGGGTCCGCATTCCTGACCCTC
ATTTACTTCCTGCCTTCCCTGCTGAATATCGGGGGCAATATCCCCTACCTGGTTACCCAGTTCTTCGGAGGCACCAGCCT
TCTCATTCTGGTGGGCGTACTGCTTGACATGATGCGCCAGGTGGAAACGACCCTTCTTTCCCGCAATTACGACGGCTTCC
TGAAAAAAGGCAAGCTCAAGGGCAAATACGGGCACATCCAAGGTACCGGCGCCGCCGCGGGCAGCCGCACCGTTACCGTC
ATGTGGATTGTTATCGCTCTGCTTGTGCTGGCCGGAGCCATCGCCTACAACGCCATGCAGTAA

Upstream 100 bases:

>100_bases
GCATCATTGTGTTTACTGTTGCGGTTCCCATGGATGCCCCGGGTGCAAACCGCCGCGACATGCAAGCCAAGCTGCGCGCC
AACTTTTATATTACAGGACC

Downstream 100 bases:

>100_bases
GCCCCCTTTTTTACTGAAAGTAAAGATATGAAGGAACTCAAGCATTTCATTCTGGTTGGGGCTCCCGCATCCGGCAAAGG
GACCCAGGGCCGGTTTTTGG

Product: preprotein translocase, SecY subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MISAFANSMKVPELRRRILFTLAMIVVVRLGVQIPLPGIDVMELQKVIEASANASGPGAGLATVLTIFSGGGLQQCGIFA
LGIMPYISASIMTQLLSAVVPQWAKMVREEGGRQKMTKWTRAIAIVIALVQGWFLVGTLEHPERLQAVGLNIPADCQLVI
DPGIQFALMTVLIMVAGTMFLMWIGDQITERGVGNGVSLIISVNIIHALPGAVTLAWKTLVYKDGAVVPMGAMLLVALIA
FLIVVVALVVTVTQAQRRIPVQYAKRVMGNKMFNGATQYLPLKLNYSGVMPVIFATAILSLPQVLFSQIAHYNTTLQWIA
TKMNDWLNPASSGYYIISGLMIFFFSYFWVATMFQPSQIAEDLKRNGGYIPGIRPGPPTALFLDQTMQRLTFAGSAFLTL
IYFLPSLLNIGGNIPYLVTQFFGGTSLLILVGVLLDMMRQVETTLLSRNYDGFLKKGKLKGKYGHIQGTGAAAGSRTVTV
MWIVIALLVLAGAIAYNAMQ

Sequences:

>Translated_500_residues
MISAFANSMKVPELRRRILFTLAMIVVVRLGVQIPLPGIDVMELQKVIEASANASGPGAGLATVLTIFSGGGLQQCGIFA
LGIMPYISASIMTQLLSAVVPQWAKMVREEGGRQKMTKWTRAIAIVIALVQGWFLVGTLEHPERLQAVGLNIPADCQLVI
DPGIQFALMTVLIMVAGTMFLMWIGDQITERGVGNGVSLIISVNIIHALPGAVTLAWKTLVYKDGAVVPMGAMLLVALIA
FLIVVVALVVTVTQAQRRIPVQYAKRVMGNKMFNGATQYLPLKLNYSGVMPVIFATAILSLPQVLFSQIAHYNTTLQWIA
TKMNDWLNPASSGYYIISGLMIFFFSYFWVATMFQPSQIAEDLKRNGGYIPGIRPGPPTALFLDQTMQRLTFAGSAFLTL
IYFLPSLLNIGGNIPYLVTQFFGGTSLLILVGVLLDMMRQVETTLLSRNYDGFLKKGKLKGKYGHIQGTGAAAGSRTVTV
MWIVIALLVLAGAIAYNAMQ
>Mature_500_residues
MISAFANSMKVPELRRRILFTLAMIVVVRLGVQIPLPGIDVMELQKVIEASANASGPGAGLATVLTIFSGGGLQQCGIFA
LGIMPYISASIMTQLLSAVVPQWAKMVREEGGRQKMTKWTRAIAIVIALVQGWFLVGTLEHPERLQAVGLNIPADCQLVI
DPGIQFALMTVLIMVAGTMFLMWIGDQITERGVGNGVSLIISVNIIHALPGAVTLAWKTLVYKDGAVVPMGAMLLVALIA
FLIVVVALVVTVTQAQRRIPVQYAKRVMGNKMFNGATQYLPLKLNYSGVMPVIFATAILSLPQVLFSQIAHYNTTLQWIA
TKMNDWLNPASSGYYIISGLMIFFFSYFWVATMFQPSQIAEDLKRNGGYIPGIRPGPPTALFLDQTMQRLTFAGSAFLTL
IYFLPSLLNIGGNIPYLVTQFFGGTSLLILVGVLLDMMRQVETTLLSRNYDGFLKKGKLKGKYGHIQGTGAAAGSRTVTV
MWIVIALLVLAGAIAYNAMQ

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=455, Percent_Identity=39.7802197802198, Blast_Score=285, Evalue=7e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 54299; Mature: 54299

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISAFANSMKVPELRRRILFTLAMIVVVRLGVQIPLPGIDVMELQKVIEASANASGPGAG
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHH
LATVLTIFSGGGLQQCGIFALGIMPYISASIMTQLLSAVVPQWAKMVREEGGRQKMTKWT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RAIAIVIALVQGWFLVGTLEHPERLQAVGLNIPADCQLVIDPGIQFALMTVLIMVAGTMF
HHHHHHHHHHHHHHEEEECCCHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
LMWIGDQITERGVGNGVSLIISVNIIHALPGAVTLAWKTLVYKDGAVVPMGAMLLVALIA
HHHHHHHHHHCCCCCCEEEEEEEHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
FLIVVVALVVTVTQAQRRIPVQYAKRVMGNKMFNGATQYLPLKLNYSGVMPVIFATAILS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCCCEEEEEECCCCCHHHHHHHHHHH
LPQVLFSQIAHYNTTLQWIATKMNDWLNPASSGYYIISGLMIFFFSYFWVATMFQPSQIA
HHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
EDLKRNGGYIPGIRPGPPTALFLDQTMQRLTFAGSAFLTLIYFLPSLLNIGGNIPYLVTQ
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FFGGTSLLILVGVLLDMMRQVETTLLSRNYDGFLKKGKLKGKYGHIQGTGAAAGSRTVTV
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEECCCCCCCCCHHHH
MWIVIALLVLAGAIAYNAMQ
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISAFANSMKVPELRRRILFTLAMIVVVRLGVQIPLPGIDVMELQKVIEASANASGPGAG
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHH
LATVLTIFSGGGLQQCGIFALGIMPYISASIMTQLLSAVVPQWAKMVREEGGRQKMTKWT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RAIAIVIALVQGWFLVGTLEHPERLQAVGLNIPADCQLVIDPGIQFALMTVLIMVAGTMF
HHHHHHHHHHHHHHEEEECCCHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
LMWIGDQITERGVGNGVSLIISVNIIHALPGAVTLAWKTLVYKDGAVVPMGAMLLVALIA
HHHHHHHHHHCCCCCCEEEEEEEHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
FLIVVVALVVTVTQAQRRIPVQYAKRVMGNKMFNGATQYLPLKLNYSGVMPVIFATAILS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCCCEEEEEECCCCCHHHHHHHHHHH
LPQVLFSQIAHYNTTLQWIATKMNDWLNPASSGYYIISGLMIFFFSYFWVATMFQPSQIA
HHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
EDLKRNGGYIPGIRPGPPTALFLDQTMQRLTFAGSAFLTLIYFLPSLLNIGGNIPYLVTQ
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FFGGTSLLILVGVLLDMMRQVETTLLSRNYDGFLKKGKLKGKYGHIQGTGAAAGSRTVTV
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEECCCCCCCCCHHHH
MWIVIALLVLAGAIAYNAMQ
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA