Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735420
Identifier: 187735420
GI number: 187735420
Start: 1098255
End: 1099271
Strand: Reverse
Name: 187735420
Synonym: Amuc_0919
Alternate gene names: NA
Gene position: 1099271-1098255 (Counterclockwise)
Preceding gene: 187735422
Following gene: 187735419
Centisome position: 41.26
GC content: 55.26
Gene sequence:
>1017_bases ATGCGTTACCTACTTCTCATCCTGTTGCTCGCCGGGGGATACTACGGCTGGGATTATTATCAAAACGGCCTTGCACCCAG GCATGAAGCCCTCAAAGCCATGGAGCAGGAACCCTGCCCGGAGCTGGATGCGGCCCAAGCCCGTTTTGATGAAGCCGCGG AACTTCACGAACAGCAGGTGGTGCGTCTCCAGAAAGCTATTCAACGGAAGGAAGAAGCCGTCCGCAAATACTGGGATGCT CGAATAAAGCAAGCCGGCCAGGAAAAAGACGGGAAAAAGACGCCCTCTCCCGTAAGCGGAAAGCCCAATGCCCGAAGCGC GGAAGCCCGAATAGCCCATCTGCTGGAACAATATGACCGGCGCGTTGCGGAAGTGGAAGAACTCAAAAGCAGGAGGGACG CCACCAGACAACAATTGGACAGCGCCCGAAACCGGCTTCAGGAACAAATACGCCAGGTGGAAACCCGTCTGGACATCAAC CGCATCCAGCTCGCGGAGGCGTCCAACACAAAAAGCAGGAATTTTAAAGTGACGGAGAACAGGACGGATCTGCTCAAACT TCAGGCCAGTCTTCCGCAGGAACTGGAGCGCATTACCGACCAGGGGGAAGCCGCTCTGCGCGACCAGACGGAAGCTTACG AAAAGGCCAAAAGAGAGTTGGGCCTGTTCCAAAACAATGTGGACAGGCAGATCGCCAGTCTTCGGAACACCATGAACTCC CCTCTGGCGGAAGATTATGATGAGACGGAAATACTTTCGGAAGACCCCGAATTCCGCACGATGATTGCTCCTTACGACCA GGCCGTCAGCCATGAGGAAACGATTGTCATGCGAACGGAGGCGGATGTGGAGGAACAGGCCAAAGCCCTGCACGGGCTGC AACGCGTCAGAGACGCGAAACTCGAAGAGGAGCGCAGCCGGCTCAGACAGGAAGAAGAAATTTTCTTCACGGCGGCAGTC GTTATCGGCGTAATATTGCTGATCTCCATTCTGCTCTCTTTCGCCAGAAGGAGATGA
Upstream 100 bases:
>100_bases ATTGAGGGGAAAAGCTCCGGATGGCTGATTTTAGAGTTTGCAAAATCCGGCGGAATTCCCACTATGAGATTTACTTCTGA CTCTACCCTTTTTTTCATTG
Downstream 100 bases:
>100_bases TGTCTTTGAAGGTTGACACTGCACTGCAAACCTAGTTTACTGGGTGAGCCGCCGGGAACCCCGTGGAGGCACGACTGGCA AACCCCGCCAGGACCGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MRYLLLILLLAGGYYGWDYYQNGLAPRHEALKAMEQEPCPELDAAQARFDEAAELHEQQVVRLQKAIQRKEEAVRKYWDA RIKQAGQEKDGKKTPSPVSGKPNARSAEARIAHLLEQYDRRVAEVEELKSRRDATRQQLDSARNRLQEQIRQVETRLDIN RIQLAEASNTKSRNFKVTENRTDLLKLQASLPQELERITDQGEAALRDQTEAYEKAKRELGLFQNNVDRQIASLRNTMNS PLAEDYDETEILSEDPEFRTMIAPYDQAVSHEETIVMRTEADVEEQAKALHGLQRVRDAKLEEERSRLRQEEEIFFTAAV VIGVILLISILLSFARRR
Sequences:
>Translated_338_residues MRYLLLILLLAGGYYGWDYYQNGLAPRHEALKAMEQEPCPELDAAQARFDEAAELHEQQVVRLQKAIQRKEEAVRKYWDA RIKQAGQEKDGKKTPSPVSGKPNARSAEARIAHLLEQYDRRVAEVEELKSRRDATRQQLDSARNRLQEQIRQVETRLDIN RIQLAEASNTKSRNFKVTENRTDLLKLQASLPQELERITDQGEAALRDQTEAYEKAKRELGLFQNNVDRQIASLRNTMNS PLAEDYDETEILSEDPEFRTMIAPYDQAVSHEETIVMRTEADVEEQAKALHGLQRVRDAKLEEERSRLRQEEEIFFTAAV VIGVILLISILLSFARRR >Mature_338_residues MRYLLLILLLAGGYYGWDYYQNGLAPRHEALKAMEQEPCPELDAAQARFDEAAELHEQQVVRLQKAIQRKEEAVRKYWDA RIKQAGQEKDGKKTPSPVSGKPNARSAEARIAHLLEQYDRRVAEVEELKSRRDATRQQLDSARNRLQEQIRQVETRLDIN RIQLAEASNTKSRNFKVTENRTDLLKLQASLPQELERITDQGEAALRDQTEAYEKAKRELGLFQNNVDRQIASLRNTMNS PLAEDYDETEILSEDPEFRTMIAPYDQAVSHEETIVMRTEADVEEQAKALHGLQRVRDAKLEEERSRLRQEEEIFFTAAV VIGVILLISILLSFARRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39085; Mature: 39085
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLLLILLLAGGYYGWDYYQNGLAPRHEALKAMEQEPCPELDAAQARFDEAAELHEQQV CHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VRLQKAIQRKEEAVRKYWDARIKQAGQEKDGKKTPSPVSGKPNARSAEARIAHLLEQYDR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RVAEVEELKSRRDATRQQLDSARNRLQEQIRQVETRLDINRIQLAEASNTKSRNFKVTEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEECCC RTDLLKLQASLPQELERITDQGEAALRDQTEAYEKAKRELGLFQNNVDRQIASLRNTMNS HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLAEDYDETEILSEDPEFRTMIAPYDQAVSHEETIVMRTEADVEEQAKALHGLQRVRDAK CCCCCCCHHHHHCCCCCHHHHHCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH LEEERSRLRQEEEIFFTAAVVIGVILLISILLSFARRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRYLLLILLLAGGYYGWDYYQNGLAPRHEALKAMEQEPCPELDAAQARFDEAAELHEQQV CHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VRLQKAIQRKEEAVRKYWDARIKQAGQEKDGKKTPSPVSGKPNARSAEARIAHLLEQYDR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RVAEVEELKSRRDATRQQLDSARNRLQEQIRQVETRLDINRIQLAEASNTKSRNFKVTEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEECCC RTDLLKLQASLPQELERITDQGEAALRDQTEAYEKAKRELGLFQNNVDRQIASLRNTMNS HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLAEDYDETEILSEDPEFRTMIAPYDQAVSHEETIVMRTEADVEEQAKALHGLQRVRDAK CCCCCCCHHHHHCCCCCHHHHHCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH LEEERSRLRQEEEIFFTAAVVIGVILLISILLSFARRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA