Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is ywoG [H]
Identifier: 187735412
GI number: 187735412
Start: 1087839
End: 1089071
Strand: Reverse
Name: ywoG [H]
Synonym: Amuc_0911
Alternate gene names: 187735412
Gene position: 1089071-1087839 (Counterclockwise)
Preceding gene: 187735413
Following gene: 187735410
Centisome position: 40.88
GC content: 58.31
Gene sequence:
>1233_bases ATGACTCGGACAAGAGATGAATTGGCGGCGGAAACCGCACCATCCGTCAAAGCGCCTCTCTGGACGCGAGACTACATCCT GGCCTGTTGCGCCAACTTAATGACGGGGCTGGCCTTCTATGAACTGGTGCCCGTTCTCCCGCTGTACCTGACGGGACAAT TGCAGGTCTCCTCTGGCTGGCTGGGCTGGATCATGTCCATTTATGTTCTGGCCGCCATTATCTCCCGCCCCTGGTTCGCG CACCGGGTGGATACCGGAGACCGCAAGAAGATTTACATCACGGTTTACATTATGCTGGCCCTGTCCTTTTCAGGGTATGC TGCGGCCGCCACCGCCCTGGCGTTTTTCCTGACGCGCTTCATACAGGGCCTGATCTGGGGAGGCATGACCACCTCCGGCC CGACAATGGCGGTGGATATCATCCCCCCTGCCCGCCGCGGGGAAGGCCTGGGCTTCTTTGGCATGACAATGACGCTGGGC ATGTGCCTGGGCCCCGTCATCGGCCTTCAGGTATACCAGCAGTACGGCTTTTACGTGATTACCTGGAGCTCCCTGCTCCT GTGCCTGGCCGGAGCGGGCATTGCATCTCTCATCCGCGTTCCCAGGAGCCCTGTTCAGGAGCCCGTGTATGAAACGCCTA AAAAGGTACTGGACCGTCTTGTGCTGCGCGTGGGCATTCCGCTGGCGGTGAACGTGATGATCGCCACCTTCTCTTATGGC GTGGTGGCCGTGTATTCCGCCCTGTACGGGGAAATGCACGGGTTCAAATACGCCGGGCTGTTTTACGCGCTGATGGGGCT GGGCATGCTGGTCTCCAGGTTCATGGTAGGCAGGCAAATCGACCGCGGACGCGTGGCGGAGCTTTCCGTCATCTCCCTGA GCATCCTGACCGTCAGTTTCGGCGCGCTGGCGCTGGCGCCGCTGGAATGGATCTATTACGCTTCCGCCATCCTCATCGGC TTTGGCTTCGGCATTTTCATCCCCACGTTCCAAACCATGAAACTGAACATGGCGGACCGCGGCCACCGGGGAGCCGTCAA TTCCACATTTTTCACCGCTTTTGACATCGGGGTGGGAACAGGCATGTTCCTGGGAGGCAAAATTTACGCGTACCTGAACC TGAACTGGGCCTTCGGAACGGGAGCCCTGCTGAATTTGCTGGCGATCGTATATTTTTACCGCATCTCCCTGGACCACTAC CGTAAAAATAAATTGGGCGTGGATTCTGATTGA
Upstream 100 bases:
>100_bases CTTCTCCCAACAAGGATTCATCAGGGCCTTCTTCCCCCCGCTCATCATCATGACACGTCAGGCCGTTTGAAACTTTTCCC AACGGCTGTACAACCCCTGC
Downstream 100 bases:
>100_bases TTTTCCTTCCATCACTCCCGTTCCGGGATGGAAAAAACATCAATTACCCGTTTGGCTGAAGGCCTCACGCGCAGCAACCG CGGATTCCAGGCCAGGGAAA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MTRTRDELAAETAPSVKAPLWTRDYILACCANLMTGLAFYELVPVLPLYLTGQLQVSSGWLGWIMSIYVLAAIISRPWFA HRVDTGDRKKIYITVYIMLALSFSGYAAAATALAFFLTRFIQGLIWGGMTTSGPTMAVDIIPPARRGEGLGFFGMTMTLG MCLGPVIGLQVYQQYGFYVITWSSLLLCLAGAGIASLIRVPRSPVQEPVYETPKKVLDRLVLRVGIPLAVNVMIATFSYG VVAVYSALYGEMHGFKYAGLFYALMGLGMLVSRFMVGRQIDRGRVAELSVISLSILTVSFGALALAPLEWIYYASAILIG FGFGIFIPTFQTMKLNMADRGHRGAVNSTFFTAFDIGVGTGMFLGGKIYAYLNLNWAFGTGALLNLLAIVYFYRISLDHY RKNKLGVDSD
Sequences:
>Translated_410_residues MTRTRDELAAETAPSVKAPLWTRDYILACCANLMTGLAFYELVPVLPLYLTGQLQVSSGWLGWIMSIYVLAAIISRPWFA HRVDTGDRKKIYITVYIMLALSFSGYAAAATALAFFLTRFIQGLIWGGMTTSGPTMAVDIIPPARRGEGLGFFGMTMTLG MCLGPVIGLQVYQQYGFYVITWSSLLLCLAGAGIASLIRVPRSPVQEPVYETPKKVLDRLVLRVGIPLAVNVMIATFSYG VVAVYSALYGEMHGFKYAGLFYALMGLGMLVSRFMVGRQIDRGRVAELSVISLSILTVSFGALALAPLEWIYYASAILIG FGFGIFIPTFQTMKLNMADRGHRGAVNSTFFTAFDIGVGTGMFLGGKIYAYLNLNWAFGTGALLNLLAIVYFYRISLDHY RKNKLGVDSD >Mature_409_residues TRTRDELAAETAPSVKAPLWTRDYILACCANLMTGLAFYELVPVLPLYLTGQLQVSSGWLGWIMSIYVLAAIISRPWFAH RVDTGDRKKIYITVYIMLALSFSGYAAAATALAFFLTRFIQGLIWGGMTTSGPTMAVDIIPPARRGEGLGFFGMTMTLGM CLGPVIGLQVYQQYGFYVITWSSLLLCLAGAGIASLIRVPRSPVQEPVYETPKKVLDRLVLRVGIPLAVNVMIATFSYGV VAVYSALYGEMHGFKYAGLFYALMGLGMLVSRFMVGRQIDRGRVAELSVISLSILTVSFGALALAPLEWIYYASAILIGF GFGIFIPTFQTMKLNMADRGHRGAVNSTFFTAFDIGVGTGMFLGGKIYAYLNLNWAFGTGALLNLLAIVYFYRISLDHYR KNKLGVDSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44960; Mature: 44829
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTRDELAAETAPSVKAPLWTRDYILACCANLMTGLAFYELVPVLPLYLTGQLQVSSGW CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEECCCH LGWIMSIYVLAAIISRPWFAHRVDTGDRKKIYITVYIMLALSFSGYAAAATALAFFLTRF HHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEEHHHHCCCCHHHHHHHHHHHHHHH IQGLIWGGMTTSGPTMAVDIIPPARRGEGLGFFGMTMTLGMCLGPVIGLQVYQQYGFYVI HHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEE TWSSLLLCLAGAGIASLIRVPRSPVQEPVYETPKKVLDRLVLRVGIPLAVNVMIATFSYG EHHHHHHHHHCCCHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH VVAVYSALYGEMHGFKYAGLFYALMGLGMLVSRFMVGRQIDRGRVAELSVISLSILTVSF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH GALALAPLEWIYYASAILIGFGFGIFIPTFQTMKLNMADRGHRGAVNSTFFTAFDIGVGT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCEEEEEECCCCC GMFLGGKIYAYLNLNWAFGTGALLNLLAIVYFYRISLDHYRKNKLGVDSD CEEECCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TRTRDELAAETAPSVKAPLWTRDYILACCANLMTGLAFYELVPVLPLYLTGQLQVSSGW CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEECCCH LGWIMSIYVLAAIISRPWFAHRVDTGDRKKIYITVYIMLALSFSGYAAAATALAFFLTRF HHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEEHHHHCCCCHHHHHHHHHHHHHHH IQGLIWGGMTTSGPTMAVDIIPPARRGEGLGFFGMTMTLGMCLGPVIGLQVYQQYGFYVI HHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEE TWSSLLLCLAGAGIASLIRVPRSPVQEPVYETPKKVLDRLVLRVGIPLAVNVMIATFSYG EHHHHHHHHHCCCHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH VVAVYSALYGEMHGFKYAGLFYALMGLGMLVSRFMVGRQIDRGRVAELSVISLSILTVSF HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH GALALAPLEWIYYASAILIGFGFGIFIPTFQTMKLNMADRGHRGAVNSTFFTAFDIGVGT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCEEEEEECCCCC GMFLGGKIYAYLNLNWAFGTGALLNLLAIVYFYRISLDHYRKNKLGVDSD CEEECCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]