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The map label for this gene is efp [H]

Identifier: 187735376

GI number: 187735376

Start: 1043596

End: 1044162

Strand: Direct

Name: efp [H]

Synonym: Amuc_0874

Alternate gene names: 187735376

Gene position: 1043596-1044162 (Clockwise)

Preceding gene: 187735375

Following gene: 187735378

Centisome position: 39.17

GC content: 51.15

Gene sequence:

>567_bases
ATGGCAAAAGTACCCGTAATCAATCTTCGCAAGGGACACGCGGTCAATTACAACAATGACGTTTGCGTTGTAGTCAGCAT
GGAGCACAAGTGCCCCCCCCGCATGGCTTCCTATGTGCAAATGAGCATCCGCAGCATTTCCACTAAAAAGGTGTATAACC
TTCGCCTGACTTCCAATGAATCCCTGGAAGGCGTCAACCTCGCCCGTGAGGAATATGAGTTCAGCTACATTGACGGCATG
GGTTATCACTTCATGAATCCGGATACATACGAAGACATCACCGTGTCTCCGGAAATCGTGGAACCCGTCAAGGATTATCT
GATGGAAGGCAATATCTACATCCTGCTTTTCACGGATGAAACGGTCGTTTCCGTAGAACTCCCCGCCGCCATCACCATGG
AAGTGGCGGAAGCTCCTGAAGGCGTCAAGGGCGACAGCGCGAACAATGTTTACAAATCCGCCACGATGACCACCGGACTG
GTGGTGCAGGTGCCCCTTTTCATCAAGCCCGGTGAAAAGATTTCCGTAAAAACGGAAGACGGTTCCTATCTGGGCCGCGT
AAACTGA

Upstream 100 bases:

>100_bases
CCCGCTGCCCTGTTCAGGAGCGTTTTCTCCAAGCGCCTCAAGGGGTTGCCCGATTTTTTCGCCTTGACGGGAGGGGAAAA
CATGGTATGGTACGGGCCGC

Downstream 100 bases:

>100_bases
GTTGCCCCTCTTTCTGTTCTTTGAAGAGCCCCGTCCGGTTTGTCCGGATGGGGCTTTTTTCATGCCGCAATCCCTGCCCT
TTTTCCTGTTTCCGGAAGAG

Product: Elongation factor P

Products: NA

Alternate protein names: EF-P [H]

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MAKVPVINLRKGHAVNYNNDVCVVVSMEHKCPPRMASYVQMSIRSISTKKVYNLRLTSNESLEGVNLAREEYEFSYIDGM
GYHFMNPDTYEDITVSPEIVEPVKDYLMEGNIYILLFTDETVVSVELPAAITMEVAEAPEGVKGDSANNVYKSATMTTGL
VVQVPLFIKPGEKISVKTEDGSYLGRVN

Sequences:

>Translated_188_residues
MAKVPVINLRKGHAVNYNNDVCVVVSMEHKCPPRMASYVQMSIRSISTKKVYNLRLTSNESLEGVNLAREEYEFSYIDGM
GYHFMNPDTYEDITVSPEIVEPVKDYLMEGNIYILLFTDETVVSVELPAAITMEVAEAPEGVKGDSANNVYKSATMTTGL
VVQVPLFIKPGEKISVKTEDGSYLGRVN
>Mature_187_residues
AKVPVINLRKGHAVNYNNDVCVVVSMEHKCPPRMASYVQMSIRSISTKKVYNLRLTSNESLEGVNLAREEYEFSYIDGMG
YHFMNPDTYEDITVSPEIVEPVKDYLMEGNIYILLFTDETVVSVELPAAITMEVAEAPEGVKGDSANNVYKSATMTTGLV
VQVPLFIKPGEKISVKTEDGSYLGRVN

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family [H]

Homologues:

Organism=Escherichia coli, GI87082061, Length=184, Percent_Identity=31.5217391304348, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1790590, Length=180, Percent_Identity=28.3333333333333, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]

EC number: NA

Molecular weight: Translated: 20911; Mature: 20780

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVPVINLRKGHAVNYNNDVCVVVSMEHKCPPRMASYVQMSIRSISTKKVYNLRLTSNE
CCCCCEEECCCCCEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCC
SLEGVNLAREEYEFSYIDGMGYHFMNPDTYEDITVSPEIVEPVKDYLMEGNIYILLFTDE
CCCCCEEHHHHEEEEEECCCCEECCCCCCCCCEEECHHHHHHHHHHHHCCCEEEEEEECC
TVVSVELPAAITMEVAEAPEGVKGDSANNVYKSATMTTGLVVQVPLFIKPGEKISVKTED
EEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCEEEEEECC
GSYLGRVN
CCEEECCC
>Mature Secondary Structure 
AKVPVINLRKGHAVNYNNDVCVVVSMEHKCPPRMASYVQMSIRSISTKKVYNLRLTSNE
CCCCEEECCCCCEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCC
SLEGVNLAREEYEFSYIDGMGYHFMNPDTYEDITVSPEIVEPVKDYLMEGNIYILLFTDE
CCCCCEEHHHHEEEEEECCCCEECCCCCCCCCEEECHHHHHHHHHHHHCCCEEEEEEECC
TVVSVELPAAITMEVAEAPEGVKGDSANNVYKSATMTTGLVVQVPLFIKPGEKISVKTED
EEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCEEEEEECC
GSYLGRVN
CCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA