Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735354

Identifier: 187735354

GI number: 187735354

Start: 1015516

End: 1016088

Strand: Direct

Name: 187735354

Synonym: Amuc_0852

Alternate gene names: NA

Gene position: 1015516-1016088 (Clockwise)

Preceding gene: 187735350

Following gene: 187735356

Centisome position: 38.12

GC content: 46.07

Gene sequence:

>573_bases
ATGAGATTTTTTCTTTCTTTGTGTTGTTCCGCTGCGGTTTCAGGGTTGTTTGCCCCTCAGGCCGGCATAGCTCAACAGCG
TCCTCCCATTTTCGGGTTTGCCAATAAAGACAGGATACCTGAAGTTAATAAGTCGGGCAGTCCCGTTTTTGACAAACTCC
GTAATGAAGCTATGAAGAAAAAACTGCCGCTGGTAATTTATCTTACTGGTTCTTCGTGGTGTTCCCAGTGCAATATTTTT
ACCCGGGAATATATCAAAAAAACAAATTTCAAAAATGCCGCCGGGAAAAAATTTATATTTTGGCTGGTGGACACCAAACA
GGCGCCGGGCAATTCTCCGGGGACGTTTAATTTTAAAATGGTTCCGGAAGAAGCCGCAAAAATCGTGGGGTGTGCGGATT
CTCCCCGTGCGCCGTATGTGGTTCTTGGTCCTCCCGCTGTGTTTATCATTGACCCTGTTTCCGGAGAATTGATCAAGAGC
CTGTTCCCTAAGAGTGAAGTGGACAAGTATGGAAAACCTCTTGCCGGAATTATTGAAGAAACCTGGGCGGAGTTTTCCCG
CAAGCCCAAATAG

Upstream 100 bases:

>100_bases
CCTGCTATGGACCGTGTAAAGGGCATTTCTTTTTTACTTGGAAACCGGGGAATGCTTGCTGTTTGACTCTTCCGGGATAG
TGTTTATAGTAGGAGCACGT

Downstream 100 bases:

>100_bases
GAAACGGAATGTATGCGGGGAACGTCCGGTATTTTCATGCTCCAGCCAAGATGACGGGGAACAATTCCAAAAGTTCTTTT
GTTTATTTTATAGGAAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRFFLSLCCSAAVSGLFAPQAGIAQQRPPIFGFANKDRIPEVNKSGSPVFDKLRNEAMKKKLPLVIYLTGSSWCSQCNIF
TREYIKKTNFKNAAGKKFIFWLVDTKQAPGNSPGTFNFKMVPEEAAKIVGCADSPRAPYVVLGPPAVFIIDPVSGELIKS
LFPKSEVDKYGKPLAGIIEETWAEFSRKPK

Sequences:

>Translated_190_residues
MRFFLSLCCSAAVSGLFAPQAGIAQQRPPIFGFANKDRIPEVNKSGSPVFDKLRNEAMKKKLPLVIYLTGSSWCSQCNIF
TREYIKKTNFKNAAGKKFIFWLVDTKQAPGNSPGTFNFKMVPEEAAKIVGCADSPRAPYVVLGPPAVFIIDPVSGELIKS
LFPKSEVDKYGKPLAGIIEETWAEFSRKPK
>Mature_190_residues
MRFFLSLCCSAAVSGLFAPQAGIAQQRPPIFGFANKDRIPEVNKSGSPVFDKLRNEAMKKKLPLVIYLTGSSWCSQCNIF
TREYIKKTNFKNAAGKKFIFWLVDTKQAPGNSPGTFNFKMVPEEAAKIVGCADSPRAPYVVLGPPAVFIIDPVSGELIKS
LFPKSEVDKYGKPLAGIIEETWAEFSRKPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20984; Mature: 20984

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFFLSLCCSAAVSGLFAPQAGIAQQRPPIFGFANKDRIPEVNKSGSPVFDKLRNEAMKK
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
KLPLVIYLTGSSWCSQCNIFTREYIKKTNFKNAAGKKFIFWLVDTKQAPGNSPGTFNFKM
CCCEEEEEECCCHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEE
VPEEAAKIVGCADSPRAPYVVLGPPAVFIIDPVSGELIKSLFPKSEVDKYGKPLAGIIEE
CCHHHHHEECCCCCCCCCEEEECCCEEEEECCCCHHHHHHHCCHHHHHHHCCCHHHHHHH
TWAEFSRKPK
HHHHHHCCCC
>Mature Secondary Structure
MRFFLSLCCSAAVSGLFAPQAGIAQQRPPIFGFANKDRIPEVNKSGSPVFDKLRNEAMKK
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
KLPLVIYLTGSSWCSQCNIFTREYIKKTNFKNAAGKKFIFWLVDTKQAPGNSPGTFNFKM
CCCEEEEEECCCHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEE
VPEEAAKIVGCADSPRAPYVVLGPPAVFIIDPVSGELIKSLFPKSEVDKYGKPLAGIIEE
CCHHHHHEECCCCCCCCCEEEECCCEEEEECCCCHHHHHHHCCHHHHHHHCCCHHHHHHH
TWAEFSRKPK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA