Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is ktrB [H]
Identifier: 187735308
GI number: 187735308
Start: 945359
End: 947107
Strand: Direct
Name: ktrB [H]
Synonym: Amuc_0806
Alternate gene names: 187735308
Gene position: 945359-947107 (Clockwise)
Preceding gene: 187735307
Following gene: 187735309
Centisome position: 35.49
GC content: 57.06
Gene sequence:
>1749_bases ATGACCACTACACGCTCGGGATTCACCAAACTTGCAGCCGTCTGCATTGCCATTCTTCTGGGGGCGGTGGTCTGGGAGCT GGGCTGGCCCCTGACGCGGGCGGAACATGAGTGGTCGCGGCTGATTGCAGCCGTTGCCACGCTGGGCCACCTGACGGGCA TTCTGGGTTCCTATTTCCGGAAGGAAATCAACCGCCCTTCCCTGAGGCTCCTGATTTTCCAAATCATCAGCTGCCTCATG ATTTTTCTCCTGATTGCCAGGGAACAACAGGAAGCGGGATACATGAGGTTCACGGAGCTTTCCCGCCTGGTGATTACGGC CGGGCTGATTGCCATCCCCACGCTGATGTCCCTGACCAGGATTTTTGAATGGCTGGTGGGCAAGCAAAAAAAAGGCCGGC CTCTTATGGCCCCCGCCATGCAGTTTGTAGCTTCTCTGGGAGTAGTCATCCTGGCAGGCACCGGATTGCTTCTGCTGCCT AATTCCACATATCCGGGTATTACACTCAGTTTTACGGATGCCCTGTTCACCAGCACCAGCGCAGTATGCGTCACCGGTCT GAACGCCGTGGATTTTGCCCATACTTTCACCCCGCTGGGAGAAATGTTCACGCTTGCCCTTATCCAGATTGGCGGATTCG GCATCATGACGTTCGCCTACTTCGTAGCCATGATGGCAGGCCAGGGTTTTTCCCTGAGGGACCGCGTGCTGCTGACGGAT CTGCTTGATGAAGACAACCTGGGGGCCGTCGTCTCCTTTATTACCACTATTGTGGTCAGTACGCTGTTCATCGAACTGTG CGGCGCCGTCCTTCTTTATTTCTCCTGGGAAGGGAAGGACATCAACCTGATGGGGGAGCCTTTGTGGTGGCATTCCCTGT TCCACTCCGTTTCCGCCTTTTGCAATGCTGGTTTTTCAACTTTCCCGATGAATTTGATGGAGCCGGGCATCCGCCTGTGC TACAGCGGGCAGGCGGTCATCATGGCGCTGATCGTATGCGGCGGCCTGGGATTCGGCATTTACAAGGAAATCAATTCACG CCTGGCAAACCGCTTTTTTTCCAAACACCGCCGCCTGCACATGCAGTGGACCCCTTATTTCAAACTGGTGATGATCTCCA CGGGGATTTTGCTGGCGGGAGGCGCCCTGGCCATCTTTGCCGTTTCCTCTCCCCATGCCGCGGAACCGTTGGGGGAACAC CTCTGGATTTGCCTTTTCGACAGCGTCACGGCACGCACGGCGGGATTCAATATCAGCGACTACGGCCGCTATCTGCCCGC AGCCAGCCTCATTATGTGCGGTCTGATGATGGTGGGAGGCAGCCCCGGCGGCACGGCAGGCGGCATGAGAACCACTACCT GCGCCATTGCAGGTGCGGAAATCCTGCGCATCCTACGCGGCAGGGATCATGTGGAATTCTTCCGCCGCCGCATCGACCAG CGCACCGTGGCGCGCTGCGTAATTACCGTGGTGGTCTCCTGCGCCTGGATCGGCTGCTTTACCGTCCTGATTTGCGCCTT GGAGCCCTCCATGAGCTCTCTGGATATCTTCTTTGAAAACTGCAGCGCTTTTGCTACGGTAGGCGTGTCGCGGGGCATTA CTCCAGATTTAAGCGGCCCTTCCAAATACCTTCTTATCGTCAACATGCTCGCCGGCCGCGTGGGGCTCTTCGCTTTTCTC ATTGCGCTGGCCGGCACCCCTACTCCGAGGCATTACCGCTATCCATCCGTCAAAATCCCGTTAACCTGA
Upstream 100 bases:
>100_bases AGTGCGGCATCTGCCCCTTTCCCGCCCGCATGCATAAAACGGCCTAAGAGCTTTTCTTTCCATGTCCAGGTGGTAGAGTC CGCATAAGGCATTTCCATTC
Downstream 100 bases:
>100_bases ATATACCATTATGAGATACACCGTTATCGGCCTGGGCCAGTTTGGGCAGGAACTCTGCACAGAACTTTCCGCCCGTAATA TTGAAGTAGTAGCCGTTGCC
Product: H(+)-transporting two-sector ATPase
Products: NA
Alternate protein names: K(+)-uptake protein ktrB [H]
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MTTTRSGFTKLAAVCIAILLGAVVWELGWPLTRAEHEWSRLIAAVATLGHLTGILGSYFRKEINRPSLRLLIFQIISCLM IFLLIAREQQEAGYMRFTELSRLVITAGLIAIPTLMSLTRIFEWLVGKQKKGRPLMAPAMQFVASLGVVILAGTGLLLLP NSTYPGITLSFTDALFTSTSAVCVTGLNAVDFAHTFTPLGEMFTLALIQIGGFGIMTFAYFVAMMAGQGFSLRDRVLLTD LLDEDNLGAVVSFITTIVVSTLFIELCGAVLLYFSWEGKDINLMGEPLWWHSLFHSVSAFCNAGFSTFPMNLMEPGIRLC YSGQAVIMALIVCGGLGFGIYKEINSRLANRFFSKHRRLHMQWTPYFKLVMISTGILLAGGALAIFAVSSPHAAEPLGEH LWICLFDSVTARTAGFNISDYGRYLPAASLIMCGLMMVGGSPGGTAGGMRTTTCAIAGAEILRILRGRDHVEFFRRRIDQ RTVARCVITVVVSCAWIGCFTVLICALEPSMSSLDIFFENCSAFATVGVSRGITPDLSGPSKYLLIVNMLAGRVGLFAFL IALAGTPTPRHYRYPSVKIPLT
Sequences:
>Translated_582_residues MTTTRSGFTKLAAVCIAILLGAVVWELGWPLTRAEHEWSRLIAAVATLGHLTGILGSYFRKEINRPSLRLLIFQIISCLM IFLLIAREQQEAGYMRFTELSRLVITAGLIAIPTLMSLTRIFEWLVGKQKKGRPLMAPAMQFVASLGVVILAGTGLLLLP NSTYPGITLSFTDALFTSTSAVCVTGLNAVDFAHTFTPLGEMFTLALIQIGGFGIMTFAYFVAMMAGQGFSLRDRVLLTD LLDEDNLGAVVSFITTIVVSTLFIELCGAVLLYFSWEGKDINLMGEPLWWHSLFHSVSAFCNAGFSTFPMNLMEPGIRLC YSGQAVIMALIVCGGLGFGIYKEINSRLANRFFSKHRRLHMQWTPYFKLVMISTGILLAGGALAIFAVSSPHAAEPLGEH LWICLFDSVTARTAGFNISDYGRYLPAASLIMCGLMMVGGSPGGTAGGMRTTTCAIAGAEILRILRGRDHVEFFRRRIDQ RTVARCVITVVVSCAWIGCFTVLICALEPSMSSLDIFFENCSAFATVGVSRGITPDLSGPSKYLLIVNMLAGRVGLFAFL IALAGTPTPRHYRYPSVKIPLT >Mature_581_residues TTTRSGFTKLAAVCIAILLGAVVWELGWPLTRAEHEWSRLIAAVATLGHLTGILGSYFRKEINRPSLRLLIFQIISCLMI FLLIAREQQEAGYMRFTELSRLVITAGLIAIPTLMSLTRIFEWLVGKQKKGRPLMAPAMQFVASLGVVILAGTGLLLLPN STYPGITLSFTDALFTSTSAVCVTGLNAVDFAHTFTPLGEMFTLALIQIGGFGIMTFAYFVAMMAGQGFSLRDRVLLTDL LDEDNLGAVVSFITTIVVSTLFIELCGAVLLYFSWEGKDINLMGEPLWWHSLFHSVSAFCNAGFSTFPMNLMEPGIRLCY SGQAVIMALIVCGGLGFGIYKEINSRLANRFFSKHRRLHMQWTPYFKLVMISTGILLAGGALAIFAVSSPHAAEPLGEHL WICLFDSVTARTAGFNISDYGRYLPAASLIMCGLMMVGGSPGGTAGGMRTTTCAIAGAEILRILRGRDHVEFFRRRIDQR TVARCVITVVVSCAWIGCFTVLICALEPSMSSLDIFFENCSAFATVGVSRGITPDLSGPSKYLLIVNMLAGRVGLFAFLI ALAGTPTPRHYRYPSVKIPLT
Specific function: Integral membrane subunit of the KtrAB potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family. Ktr (TC 2.A.38.4) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 63428; Mature: 63297
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTRSGFTKLAAVCIAILLGAVVWELGWPLTRAEHEWSRLIAAVATLGHLTGILGSYFR CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KEINRPSLRLLIFQIISCLMIFLLIAREQQEAGYMRFTELSRLVITAGLIAIPTLMSLTR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IFEWLVGKQKKGRPLMAPAMQFVASLGVVILAGTGLLLLPNSTYPGITLSFTDALFTSTS HHHHHHCCCCCCCCCHHHHHHHHHHHCHHHEECCCEEEECCCCCCCEEEEEHHHHHHCCC AVCVTGLNAVDFAHTFTPLGEMFTLALIQIGGFGIMTFAYFVAMMAGQGFSLRDRVLLTD HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH LLDEDNLGAVVSFITTIVVSTLFIELCGAVLLYFSWEGKDINLMGEPLWWHSLFHSVSAF HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCHHHHHHHHHHHHH CNAGFSTFPMNLMEPGIRLCYSGQAVIMALIVCGGLGFGIYKEINSRLANRFFSKHRRLH HCCCCCCCCHHHHCCCHHEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEE MQWTPYFKLVMISTGILLAGGALAIFAVSSPHAAEPLGEHLWICLFDSVTARTAGFNISD EEECCHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCHHHHEEEEEECCHHHHHCCCCHHH YGRYLPAASLIMCGLMMVGGSPGGTAGGMRTTTCAIAGAEILRILRGRDHVEFFRRRIDQ HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RTVARCVITVVVSCAWIGCFTVLICALEPSMSSLDIFFENCSAFATVGVSRGITPDLSGP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SKYLLIVNMLAGRVGLFAFLIALAGTPTPRHYRYPSVKIPLT CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCC >Mature Secondary Structure TTTRSGFTKLAAVCIAILLGAVVWELGWPLTRAEHEWSRLIAAVATLGHLTGILGSYFR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KEINRPSLRLLIFQIISCLMIFLLIAREQQEAGYMRFTELSRLVITAGLIAIPTLMSLTR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IFEWLVGKQKKGRPLMAPAMQFVASLGVVILAGTGLLLLPNSTYPGITLSFTDALFTSTS HHHHHHCCCCCCCCCHHHHHHHHHHHCHHHEECCCEEEECCCCCCCEEEEEHHHHHHCCC AVCVTGLNAVDFAHTFTPLGEMFTLALIQIGGFGIMTFAYFVAMMAGQGFSLRDRVLLTD HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH LLDEDNLGAVVSFITTIVVSTLFIELCGAVLLYFSWEGKDINLMGEPLWWHSLFHSVSAF HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCCHHHHHHHHHHHHH CNAGFSTFPMNLMEPGIRLCYSGQAVIMALIVCGGLGFGIYKEINSRLANRFFSKHRRLH HCCCCCCCCHHHHCCCHHEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEE MQWTPYFKLVMISTGILLAGGALAIFAVSSPHAAEPLGEHLWICLFDSVTARTAGFNISD EEECCHHHHHHHHCCHHHCCCCEEEEEECCCCCCCCHHHHEEEEEECCHHHHHCCCCHHH YGRYLPAASLIMCGLMMVGGSPGGTAGGMRTTTCAIAGAEILRILRGRDHVEFFRRRIDQ HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RTVARCVITVVVSCAWIGCFTVLICALEPSMSSLDIFFENCSAFATVGVSRGITPDLSGP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SKYLLIVNMLAGRVGLFAFLIALAGTPTPRHYRYPSVKIPLT CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]