Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735233

Identifier: 187735233

GI number: 187735233

Start: 857843

End: 857962

Strand: Direct

Name: 187735233

Synonym: Amuc_0727

Alternate gene names: NA

Gene position: 857843-857962 (Clockwise)

Preceding gene: 187735231

Following gene: 187735234

Centisome position: 32.2

GC content: 53.33

Gene sequence:

>120_bases
ATGCCGGACACGAACACTGCGCAAACGACAATCTTCAAGGGGGACAACTTGTTGGGAATCGCTAAACAGGCCATTTTCAA
ACATACCGTTTTCCGGGAGGGCCGCCCTCCCGGAACATAG

Upstream 100 bases:

>100_bases
AGTTTTCCATAAGTAATCCACTCATTTTAAAACATTACATGAAATACTGAATCAATTTTTTTCCTGATTGGAAACAGACC
TTCCGAAACTGCGACGGATC

Downstream 100 bases:

>100_bases
GGATTGGATATACGCGCAAACTGCCGTCCTGCCTTTGGACATGTCCTTCACTATCTCGATAATTTTTTTATTTGCCTGGA
GCGGCTTAAATCAAAAGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 39; Mature: 38

Protein sequence:

>39_residues
MPDTNTAQTTIFKGDNLLGIAKQAIFKHTVFREGRPPGT

Sequences:

>Translated_39_residues
MPDTNTAQTTIFKGDNLLGIAKQAIFKHTVFREGRPPGT
>Mature_38_residues
PDTNTAQTTIFKGDNLLGIAKQAIFKHTVFREGRPPGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4273; Mature: 4142

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTNTAQTTIFKGDNLLGIAKQAIFKHTVFREGRPPGT
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PDTNTAQTTIFKGDNLLGIAKQAIFKHTVFREGRPPGT
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA