Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735218
Identifier: 187735218
GI number: 187735218
Start: 841327
End: 842001
Strand: Direct
Name: 187735218
Synonym: Amuc_0712
Alternate gene names: NA
Gene position: 841327-842001 (Clockwise)
Preceding gene: 187735216
Following gene: 187735220
Centisome position: 31.58
GC content: 55.26
Gene sequence:
>675_bases ATGACTGAAGATGCCATATTCAAGGAACAGTGGAACCTTCTTAAGAAGGAGATGGCAATGGGAGACGCTCATCTCCAGCA AAGGCTGGAACAGTTCATTTTCCGGCAATACGGCCGGGCGGTTCTGACGCATTACATTAAAGCCCTTTCCGTCCTGGAGC TCAGCCGCCATTTCTACCTGCGGTTCCGCAGGAGGAGCCGTGCCGTAACGGAACCCATTCTCTACTGGACCGTGCTTGCG GAAACAACCATCCACATGACGCTGGAGGGAGTAAAAGACATGCACCCCTTCATCTCCCTGCCGGCACGTGCCGGCGCAAC CTTCCAGCTTGACATGTTAAAAGACTGCTACCTTCTTTATTTGAGGGACCGGGGATATCCCTGCTGGCCCAGGGCCTCCC GCAGAAGCTGCATCATCCGGAACAAATGGAACGCTCCGGAACTGGAAGCCGCCTATTTCCTCCGGTTGTGCCAGAACAGC ACGGACCGTCATTATGCCAACGTGATGAATATCCTGCTGGAAGAAATACTGCACATGCTGATTACCCTCCGCCAACTCAG GAACCACGGAAAAAACCTGCTGGAACTCAGAAGAAGCCGGAACTCCAATTCTTCCCCGGGCGGCGTTCCGCCGCCGTCCC TCCGCCCGCAGCACCCTCCGGAAGACAGTCTTTAA
Upstream 100 bases:
>100_bases CCCCTGAACTTGGAAAAATTGATAAAATACCCCCAATTCCATTTGAATTTCCAGGAAATTAATTTATTTTATATTGGAAA TAATTGATTTTTTCAAATCT
Downstream 100 bases:
>100_bases AACCATCCGCGCTTTTTCCAAAGGATACTTGAAAAAACCGCCGGGACCTTACAAAATCAACATGCAGTCTCCATAGGAGA AAAATCTGTACCGTTCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTEDAIFKEQWNLLKKEMAMGDAHLQQRLEQFIFRQYGRAVLTHYIKALSVLELSRHFYLRFRRRSRAVTEPILYWTVLA ETTIHMTLEGVKDMHPFISLPARAGATFQLDMLKDCYLLYLRDRGYPCWPRASRRSCIIRNKWNAPELEAAYFLRLCQNS TDRHYANVMNILLEEILHMLITLRQLRNHGKNLLELRRSRNSNSSPGGVPPPSLRPQHPPEDSL
Sequences:
>Translated_224_residues MTEDAIFKEQWNLLKKEMAMGDAHLQQRLEQFIFRQYGRAVLTHYIKALSVLELSRHFYLRFRRRSRAVTEPILYWTVLA ETTIHMTLEGVKDMHPFISLPARAGATFQLDMLKDCYLLYLRDRGYPCWPRASRRSCIIRNKWNAPELEAAYFLRLCQNS TDRHYANVMNILLEEILHMLITLRQLRNHGKNLLELRRSRNSNSSPGGVPPPSLRPQHPPEDSL >Mature_223_residues TEDAIFKEQWNLLKKEMAMGDAHLQQRLEQFIFRQYGRAVLTHYIKALSVLELSRHFYLRFRRRSRAVTEPILYWTVLAE TTIHMTLEGVKDMHPFISLPARAGATFQLDMLKDCYLLYLRDRGYPCWPRASRRSCIIRNKWNAPELEAAYFLRLCQNST DRHYANVMNILLEEILHMLITLRQLRNHGKNLLELRRSRNSNSSPGGVPPPSLRPQHPPEDSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26390; Mature: 26259
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDAIFKEQWNLLKKEMAMGDAHLQQRLEQFIFRQYGRAVLTHYIKALSVLELSRHFYL CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFRRRSRAVTEPILYWTVLAETTIHMTLEGVKDMHPFISLPARAGATFQLDMLKDCYLLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH LRDRGYPCWPRASRRSCIIRNKWNAPELEAAYFLRLCQNSTDRHYANVMNILLEEILHML HHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ITLRQLRNHGKNLLELRRSRNSNSSPGGVPPPSLRPQHPPEDSL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TEDAIFKEQWNLLKKEMAMGDAHLQQRLEQFIFRQYGRAVLTHYIKALSVLELSRHFYL CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFRRRSRAVTEPILYWTVLAETTIHMTLEGVKDMHPFISLPARAGATFQLDMLKDCYLLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH LRDRGYPCWPRASRRSCIIRNKWNAPELEAAYFLRLCQNSTDRHYANVMNILLEEILHML HHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ITLRQLRNHGKNLLELRRSRNSNSSPGGVPPPSLRPQHPPEDSL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA