Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735200
Identifier: 187735200
GI number: 187735200
Start: 818416
End: 819600
Strand: Direct
Name: 187735200
Synonym: Amuc_0694
Alternate gene names: NA
Gene position: 818416-819600 (Clockwise)
Preceding gene: 187735199
Following gene: 187735201
Centisome position: 30.72
GC content: 54.43
Gene sequence:
>1185_bases ATGAACTGCACATCCCTTACCATGGCCGGACTTCTGGCCGCCCTGTCCCTGGGAATTCCCTCCCTGGCGGATTCCATTGC CCCGGGCATTCTTCTTCCCAAAAAAAATACCAAATCCATTTCCTTCTCCCCCAAGGGGACCTCGGACATTTTCCTGCTCG GAATCATGCCGCAGGGAAGTTCCGTCAAGAAAGGGGAATCCGTAGCTCAGGCGGACTTCCGCATACTGGACAATAGTATC GAAGATTATGAACGCGCCATCAAGAGCAAGAACCTGGAGGTGTTGAAACTCCGGTACGCCCTGGACCAGCAGAAGGAACG TTCCGCCCTGGCCCTGCAAAAATATCAGACGGCCCTGACACGGACGGAAGAGGATCAAAAGGATTTTCTGGAAAAACGGA AGGCCCGCATGCTGGCGGAAGAAGAGGAACGCGTCAACAAAGCCCTGCGCCACATGTCCTACAAACAGGAAGAGCTGAAC CAGCTTACCAAGATGTACAAGGATGACCAGGTGGCGGAAGAAACGGAAGAGATCATTTTGAAACGCCTGAAAAATGAACT TGGGGAAAGCGAATTTGCCGTTCAGGGAGCCAAACTCGTTGCGGAACTGGCCAAGCTGCGCAATATTCATCGCCTGGGGG AAGACTATGCTACGGCAGTCAAGGAAAAGCAGATGGATCTGGAACAGGCAAGGAAGCAGGCGGATTTTGATCTGGAACAG AAAAAGATAGCCCTGACGGAGGCGGAAGTCTCCCTGAGACGCCTTCAGAATAAGTACAATGAACTGAAAGCAGACCGGGA AATGGCCTCTTTCAAGGCCCCGGAAAACGGCATCCTGCTGTACGGCGGATATGTGGCGGACAAGTGGGTGGCCATTCCGG TGGCGGAAAAGCTGAAACCCGGCGGCAAACTGGGAGCTTTTGACAAAATCGCCACCATCGTTCCGCCAAACTCGGAACTG ATTGTCCAGGCTACTCTTCCGGACTCCACCGCTACGCCCAAGGTGGGGGAAACCGTCGTCATCAAAATAACGAACATGCA GATTCCCGGCGTTATTACGGAAGCCAGCCCCATTCCGGGAGCAGACGGCAAGCGCCGCATTATCATCACGCCCAAGGTTC CCGCCAGCCAGATTTTCGCCCCCGGCCTTCCCGTCCAGGTGACCATCAAGGACCAACAGGCCTGA
Upstream 100 bases:
>100_bases ACATAAAGGAAAGAAAACCGCTTTTCACACCGTTATTCTTGGAAAGAAGGGACGTTTCGTCCCCTTCTCCGCTCACCAGT CCTGATTCCATCCTATTATT
Downstream 100 bases:
>100_bases TTTCCCTTAACGGATCCCCATGAATAAAGCCGTCCTTTTCCTTGCCGCCCTTGGAGCCAGTACGGCGCTCTGCGCTCCTG TTCCGGCGGAAAAAGCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MNCTSLTMAGLLAALSLGIPSLADSIAPGILLPKKNTKSISFSPKGTSDIFLLGIMPQGSSVKKGESVAQADFRILDNSI EDYERAIKSKNLEVLKLRYALDQQKERSALALQKYQTALTRTEEDQKDFLEKRKARMLAEEEERVNKALRHMSYKQEELN QLTKMYKDDQVAEETEEIILKRLKNELGESEFAVQGAKLVAELAKLRNIHRLGEDYATAVKEKQMDLEQARKQADFDLEQ KKIALTEAEVSLRRLQNKYNELKADREMASFKAPENGILLYGGYVADKWVAIPVAEKLKPGGKLGAFDKIATIVPPNSEL IVQATLPDSTATPKVGETVVIKITNMQIPGVITEASPIPGADGKRRIIITPKVPASQIFAPGLPVQVTIKDQQA
Sequences:
>Translated_394_residues MNCTSLTMAGLLAALSLGIPSLADSIAPGILLPKKNTKSISFSPKGTSDIFLLGIMPQGSSVKKGESVAQADFRILDNSI EDYERAIKSKNLEVLKLRYALDQQKERSALALQKYQTALTRTEEDQKDFLEKRKARMLAEEEERVNKALRHMSYKQEELN QLTKMYKDDQVAEETEEIILKRLKNELGESEFAVQGAKLVAELAKLRNIHRLGEDYATAVKEKQMDLEQARKQADFDLEQ KKIALTEAEVSLRRLQNKYNELKADREMASFKAPENGILLYGGYVADKWVAIPVAEKLKPGGKLGAFDKIATIVPPNSEL IVQATLPDSTATPKVGETVVIKITNMQIPGVITEASPIPGADGKRRIIITPKVPASQIFAPGLPVQVTIKDQQA >Mature_394_residues MNCTSLTMAGLLAALSLGIPSLADSIAPGILLPKKNTKSISFSPKGTSDIFLLGIMPQGSSVKKGESVAQADFRILDNSI EDYERAIKSKNLEVLKLRYALDQQKERSALALQKYQTALTRTEEDQKDFLEKRKARMLAEEEERVNKALRHMSYKQEELN QLTKMYKDDQVAEETEEIILKRLKNELGESEFAVQGAKLVAELAKLRNIHRLGEDYATAVKEKQMDLEQARKQADFDLEQ KKIALTEAEVSLRRLQNKYNELKADREMASFKAPENGILLYGGYVADKWVAIPVAEKLKPGGKLGAFDKIATIVPPNSEL IVQATLPDSTATPKVGETVVIKITNMQIPGVITEASPIPGADGKRRIIITPKVPASQIFAPGLPVQVTIKDQQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43629; Mature: 43629
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCTSLTMAGLLAALSLGIPSLADSIAPGILLPKKNTKSISFSPKGTSDIFLLGIMPQGS CCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCEEEECCCCCCCEEEEEEECCCC SVKKGESVAQADFRILDNSIEDYERAIKSKNLEVLKLRYALDQQKERSALALQKYQTALT CCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH RTEEDQKDFLEKRKARMLAEEEERVNKALRHMSYKQEELNQLTKMYKDDQVAEETEEIIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH KRLKNELGESEFAVQGAKLVAELAKLRNIHRLGEDYATAVKEKQMDLEQARKQADFDLEQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH KKIALTEAEVSLRRLQNKYNELKADREMASFKAPENGILLYGGYVADKWVAIPVAEKLKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEECCCEEEEECHHHCCC GGKLGAFDKIATIVPPNSELIVQATLPDSTATPKVGETVVIKITNMQIPGVITEASPIPG CCCCCCHHHEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEECEECCCEEECCCCCCC ADGKRRIIITPKVPASQIFAPGLPVQVTIKDQQA CCCCEEEEEECCCCHHHHCCCCCCEEEEEECCCC >Mature Secondary Structure MNCTSLTMAGLLAALSLGIPSLADSIAPGILLPKKNTKSISFSPKGTSDIFLLGIMPQGS CCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCEEEECCCCCCCEEEEEEECCCC SVKKGESVAQADFRILDNSIEDYERAIKSKNLEVLKLRYALDQQKERSALALQKYQTALT CCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH RTEEDQKDFLEKRKARMLAEEEERVNKALRHMSYKQEELNQLTKMYKDDQVAEETEEIIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH KRLKNELGESEFAVQGAKLVAELAKLRNIHRLGEDYATAVKEKQMDLEQARKQADFDLEQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH KKIALTEAEVSLRRLQNKYNELKADREMASFKAPENGILLYGGYVADKWVAIPVAEKLKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEECCCEEEEECHHHCCC GGKLGAFDKIATIVPPNSELIVQATLPDSTATPKVGETVVIKITNMQIPGVITEASPIPG CCCCCCHHHEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEECEECCCEEECCCCCCC ADGKRRIIITPKVPASQIFAPGLPVQVTIKDQQA CCCCEEEEEECCCCHHHHCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA