Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735184
Identifier: 187735184
GI number: 187735184
Start: 797081
End: 798040
Strand: Direct
Name: 187735184
Synonym: Amuc_0678
Alternate gene names: NA
Gene position: 797081-798040 (Clockwise)
Preceding gene: 187735183
Following gene: 187735185
Centisome position: 29.92
GC content: 55.31
Gene sequence:
>960_bases ATGAAAAAACTTTCCTCCCTGCTGCTGGCCCTGGCCGGAAGCCTTGCCTGCAGCGGCGCCAACAGCGTTCCCTCCCACAT TGTCCAGCCCCTGCCCAGGGAACTGGATCCCCGCCTGGAACAACCCCTCACCCCGCCTCCCCATATTGTACGCCCCCTGA CGGAGGAAGAGACAGCCCGGAGGGAACGGGAACTGGCCCCTGTTCCGACCGCAGGCTTGAAGGAAGACGGGGAAAAGGCG ATTCAAACATACAGCGCGCAGGAAAAAACCGTAGACGGGCGGATTCAGGAATTCCGCCAGCAGCACCAGGTTGCCGGAAA TACCCCCGCCCCGGCTGCGGAAACTACTCCCTCTTCCGCAGCATCCGGCCCGGAGGAAGGCTTCCTGCAGGCCAATTCCC CAAAAGACCTGTACACCGTAGATTGTGACGGAGACTTGTACTTCGATATGGAAGAAGGCGTTCTGGTGTTCATGAAAAAT GTCCGGGTGCGCAACCCCGGCCTTTCCATGGATTGTGCGGATCATCTGAAAATTTATGCGGAATTCGTGCCGAAGAAACC GGGCGACAAAAAACCCTCCGACGTCAAGAAGGAAAAGGGGAAAGAAGAAAATCAGACTCAGGTGGCTCTTCCCAACGGAG GCAATTTCGACTACAATTCCATTAAAACGGTTGCGGCTTCCGGAAATGTGAAGGCCAGTTACACCAACAAACAGGGAGAA ACAAGCAACGCCCAGGCTGAAAAAATCACCTACAACGCCAAAACCGGAGAAATCATCCTGACGGGTGCCCCGGTCATCGT CACTCCGGACGTCATCGTGAAAAATCCGAACAAGGATGCTTTCATTCGAGTGTACTCCAACGGAAACATGTACGGCAGCC GCGGAACCAAGACCACGTTCCGCCACGTAGACAAAAAACTTTCCGACCGGGAAAACCAGAAAACCAGCCGCAAACCGTGA
Upstream 100 bases:
>100_bases CGGCCTTTACCTGGACACCAATATCAAGAGGGGCATCATTCTGGGTCCCGTTCAAACCACCATCCGCATGGCTCAACGCA ACAAGTAACCATTCCTTTTT
Downstream 100 bases:
>100_bases GTTCGTTCCACTCTTCTCCTTTGCTAAGCGCCGAAGGCATCTGTAAAACCTACAAAACGCGAACCGTTGTGGACCAGGTC AGCCTGAAGGTAGGGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKKLSSLLLALAGSLACSGANSVPSHIVQPLPRELDPRLEQPLTPPPHIVRPLTEEETARRERELAPVPTAGLKEDGEKA IQTYSAQEKTVDGRIQEFRQQHQVAGNTPAPAAETTPSSAASGPEEGFLQANSPKDLYTVDCDGDLYFDMEEGVLVFMKN VRVRNPGLSMDCADHLKIYAEFVPKKPGDKKPSDVKKEKGKEENQTQVALPNGGNFDYNSIKTVAASGNVKASYTNKQGE TSNAQAEKITYNAKTGEIILTGAPVIVTPDVIVKNPNKDAFIRVYSNGNMYGSRGTKTTFRHVDKKLSDRENQKTSRKP
Sequences:
>Translated_319_residues MKKLSSLLLALAGSLACSGANSVPSHIVQPLPRELDPRLEQPLTPPPHIVRPLTEEETARRERELAPVPTAGLKEDGEKA IQTYSAQEKTVDGRIQEFRQQHQVAGNTPAPAAETTPSSAASGPEEGFLQANSPKDLYTVDCDGDLYFDMEEGVLVFMKN VRVRNPGLSMDCADHLKIYAEFVPKKPGDKKPSDVKKEKGKEENQTQVALPNGGNFDYNSIKTVAASGNVKASYTNKQGE TSNAQAEKITYNAKTGEIILTGAPVIVTPDVIVKNPNKDAFIRVYSNGNMYGSRGTKTTFRHVDKKLSDRENQKTSRKP >Mature_319_residues MKKLSSLLLALAGSLACSGANSVPSHIVQPLPRELDPRLEQPLTPPPHIVRPLTEEETARRERELAPVPTAGLKEDGEKA IQTYSAQEKTVDGRIQEFRQQHQVAGNTPAPAAETTPSSAASGPEEGFLQANSPKDLYTVDCDGDLYFDMEEGVLVFMKN VRVRNPGLSMDCADHLKIYAEFVPKKPGDKKPSDVKKEKGKEENQTQVALPNGGNFDYNSIKTVAASGNVKASYTNKQGE TSNAQAEKITYNAKTGEIILTGAPVIVTPDVIVKNPNKDAFIRVYSNGNMYGSRGTKTTFRHVDKKLSDRENQKTSRKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34834; Mature: 34834
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSSLLLALAGSLACSGANSVPSHIVQPLPRELDPRLEQPLTPPPHIVRPLTEEETAR CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHCCHHHHCCCCCCCHHHCCCCHHHHHH RERELAPVPTAGLKEDGEKAIQTYSAQEKTVDGRIQEFRQQHQVAGNTPAPAAETTPSSA HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ASGPEEGFLQANSPKDLYTVDCDGDLYFDMEEGVLVFMKNVRVRNPGLSMDCADHLKIYA CCCCCCCCEECCCCCCEEEEECCCCEEEECCCCEEEEEECCEECCCCCCCCHHHHHHHHH EFVPKKPGDKKPSDVKKEKGKEENQTQVALPNGGNFDYNSIKTVAASGNVKASYTNKQGE HHCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEECCCEEEEECCCCCC TSNAQAEKITYNAKTGEIILTGAPVIVTPDVIVKNPNKDAFIRVYSNGNMYGSRGTKTTF CCCCCCEEEEEECCCCEEEEECCCEEECCCEEEECCCCCEEEEEEECCCEECCCCCHHHH RHVDKKLSDRENQKTSRKP HHHHHHHHHHHHCHHCCCC >Mature Secondary Structure MKKLSSLLLALAGSLACSGANSVPSHIVQPLPRELDPRLEQPLTPPPHIVRPLTEEETAR CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHCCHHHHCCCCCCCHHHCCCCHHHHHH RERELAPVPTAGLKEDGEKAIQTYSAQEKTVDGRIQEFRQQHQVAGNTPAPAAETTPSSA HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ASGPEEGFLQANSPKDLYTVDCDGDLYFDMEEGVLVFMKNVRVRNPGLSMDCADHLKIYA CCCCCCCCEECCCCCCEEEEECCCCEEEECCCCEEEEEECCEECCCCCCCCHHHHHHHHH EFVPKKPGDKKPSDVKKEKGKEENQTQVALPNGGNFDYNSIKTVAASGNVKASYTNKQGE HHCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEECCCEEEEECCCCCC TSNAQAEKITYNAKTGEIILTGAPVIVTPDVIVKNPNKDAFIRVYSNGNMYGSRGTKTTF CCCCCCEEEEEECCCCEEEEECCCEEECCCEEEECCCCCEEEEEEECCCEECCCCCHHHH RHVDKKLSDRENQKTSRKP HHHHHHHHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA